Protein–RNA interactions for Protein: Q9UHP3

USP25, Ubiquitin carboxyl-terminal hydrolase 25, humanhuman

Predictions only

Length 1,055 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
USP25Q9UHP3 RANBP9-201ENST00000011619 3113 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
USP25Q9UHP3 WIPI2-201ENST00000288828 4476 ntTSL 1 (best) BASIC20.71■□□□□ 0.91
USP25Q9UHP3 ADGRG2-202ENST00000354791 4494 ntTSL 5 BASIC20.71■□□□□ 0.91
USP25Q9UHP3 PLCB3-204ENST00000540288 4469 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
USP25Q9UHP3 AC120049.1-201ENST00000592638 2065 ntTSL 1 (best) BASIC20.71■□□□□ 0.91
USP25Q9UHP3 ZGLP1-202ENST00000403903 2303 ntAPPRIS P2 TSL 1 (best) BASIC20.71■□□□□ 0.91
USP25Q9UHP3 DTX2-201ENST00000324432 2769 ntAPPRIS P3 TSL 1 (best) BASIC20.71■□□□□ 0.91
USP25Q9UHP3 RNF2-201ENST00000367509 1677 ntTSL 2 BASIC20.71■□□□□ 0.91
USP25Q9UHP3 PPIF-201ENST00000225174 2190 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
USP25Q9UHP3 FXYD6-204ENST00000526014 2171 ntAPPRIS P2 TSL 1 (best) BASIC20.71■□□□□ 0.91
USP25Q9UHP3 HCN4-201ENST00000261917 7228 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
USP25Q9UHP3 DHRS2-201ENST00000250383 1705 ntAPPRIS P3 TSL 1 (best) BASIC20.71■□□□□ 0.91
USP25Q9UHP3 ANKRD10-202ENST00000310847 1193 ntTSL 1 (best) BASIC20.71■□□□□ 0.91
USP25Q9UHP3 PRR31-201ENST00000371629 978 ntTSL 2 BASIC20.71■□□□□ 0.91
USP25Q9UHP3 MIR149-201ENST00000384879 89 ntBASIC20.71■□□□□ 0.91
USP25Q9UHP3 LINC00620-201ENST00000419618 996 ntTSL 1 (best) BASIC20.71■□□□□ 0.91
USP25Q9UHP3 RNF144A-AS1-204ENST00000437589 618 ntTSL 2 BASIC20.71■□□□□ 0.91
USP25Q9UHP3 PHF11-218ENST00000496623 1173 ntAPPRIS ALT2 TSL 2 BASIC20.71■□□□□ 0.91
USP25Q9UHP3 PACRGL-207ENST00000502938 810 ntTSL 4 BASIC20.71■□□□□ 0.91
USP25Q9UHP3 AC016737.2-201ENST00000609273 358 ntTSL 3 BASIC20.71■□□□□ 0.91
USP25Q9UHP3 PLA2G4C-222ENST00000599921 1984 ntAPPRIS P3 TSL 1 (best) BASIC20.71■□□□□ 0.91
USP25Q9UHP3 C8orf33-201ENST00000331434 2677 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
USP25Q9UHP3 RSPH6A-201ENST00000221538 2456 ntAPPRIS P2 TSL 1 (best) BASIC20.71■□□□□ 0.91
USP25Q9UHP3 FAM174B-201ENST00000327355 2792 ntAPPRIS P2 TSL 1 (best) BASIC20.71■□□□□ 0.91
USP25Q9UHP3 ZDHHC4-205ENST00000396713 1552 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
USP25Q9UHP3 TUFM-201ENST00000313511 2071 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
USP25Q9UHP3 TBXAS1-210ENST00000458722 2057 ntTSL 2 BASIC20.71■□□□□ 0.91
USP25Q9UHP3 CD14-201ENST00000302014 1886 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
USP25Q9UHP3 BPHL-203ENST00000380379 1928 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.91
USP25Q9UHP3 ECE2-205ENST00000404464 3229 ntTSL 1 (best) BASIC20.7■□□□□ 0.9
USP25Q9UHP3 AC092338.2-201ENST00000568827 1415 ntBASIC20.7■□□□□ 0.9
USP25Q9UHP3 PHKA2-201ENST00000379942 5559 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
USP25Q9UHP3 HNRNPM-217ENST00000620401 2458 ntAPPRIS ALT2 TSL 1 (best) BASIC20.7■□□□□ 0.9
USP25Q9UHP3 PML-211ENST00000564428 1985 ntAPPRIS ALT2 TSL 1 (best) BASIC20.7■□□□□ 0.9
USP25Q9UHP3 SYT17-207ENST00000568115 1721 ntTSL 5 BASIC20.7■□□□□ 0.9
USP25Q9UHP3 HSDL1-202ENST00000434463 1493 ntTSL 2 BASIC20.7■□□□□ 0.9
USP25Q9UHP3 OTOP2-202ENST00000580223 2086 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
USP25Q9UHP3 UBN1-201ENST00000262376 6252 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
USP25Q9UHP3 CFAP46-201ENST00000368585 1825 ntAPPRIS ALT2 TSL 2 BASIC20.7■□□□□ 0.9
USP25Q9UHP3 SUFU-201ENST00000369899 1839 ntTSL 1 (best) BASIC20.7■□□□□ 0.9
USP25Q9UHP3 LGALS7-201ENST00000378626 466 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
USP25Q9UHP3 AC012618.3-203ENST00000426044 917 ntTSL 2 BASIC20.7■□□□□ 0.9
USP25Q9UHP3 LINC01534-202ENST00000433232 554 ntTSL 3 BASIC20.7■□□□□ 0.9
USP25Q9UHP3 PHB2-202ENST00000440277 996 ntTSL 5 BASIC20.7■□□□□ 0.9
USP25Q9UHP3 AL139246.2-201ENST00000456687 1297 ntTSL 5 BASIC20.7■□□□□ 0.9
USP25Q9UHP3 NDUFB10-202ENST00000543683 830 ntTSL 1 (best) BASIC20.7■□□□□ 0.9
USP25Q9UHP3 UBL5-202ENST00000586895 432 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
USP25Q9UHP3 AC005786.3-201ENST00000589360 565 ntTSL 3 BASIC20.7■□□□□ 0.9
USP25Q9UHP3 PRKACA-209ENST00000590853 1101 ntTSL 5 BASIC20.7■□□□□ 0.9
USP25Q9UHP3 CEBPG-201ENST00000284000 4109 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
USP25Q9UHP3 C18orf21-205ENST00000592875 1581 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
USP25Q9UHP3 EHMT1-204ENST00000462484 2707 ntTSL 1 (best) BASIC20.7■□□□□ 0.9
USP25Q9UHP3 NBL1-210ENST00000615215 2160 ntAPPRIS ALT2 TSL 1 (best) BASIC20.7■□□□□ 0.9
USP25Q9UHP3 SRF-201ENST00000265354 4202 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
USP25Q9UHP3 CYSTM1-201ENST00000261811 1336 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
USP25Q9UHP3 WFDC1-203ENST00000568638 1319 ntAPPRIS P1 TSL 2 BASIC20.7■□□□□ 0.9
USP25Q9UHP3 OGFOD2-212ENST00000538755 1949 ntTSL 1 (best) BASIC20.7■□□□□ 0.9
USP25Q9UHP3 ELN-207ENST00000380562 2240 ntAPPRIS ALT2 TSL 1 (best) BASIC20.7■□□□□ 0.9
USP25Q9UHP3 TOR2A-205ENST00000463577 2211 ntTSL 1 (best) BASIC20.7■□□□□ 0.9
USP25Q9UHP3 MUM1-216ENST00000627377 2235 ntAPPRIS ALT2 TSL 5 BASIC20.7■□□□□ 0.9
USP25Q9UHP3 USB1-201ENST00000219281 2282 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
USP25Q9UHP3 ZBTB32-201ENST00000262630 1960 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
USP25Q9UHP3 QPCTL-201ENST00000012049 2310 ntAPPRIS P1 TSL 2 BASIC20.7■□□□□ 0.9
USP25Q9UHP3 REPIN1-203ENST00000444957 2969 ntAPPRIS P3 TSL 1 (best) BASIC20.7■□□□□ 0.9
USP25Q9UHP3 GUCY1B3-206ENST00000507146 2709 ntTSL 1 (best) BASIC20.69■□□□□ 0.9
USP25Q9UHP3 MAFB-201ENST00000373313 3393 ntAPPRIS P1 BASIC20.69■□□□□ 0.9
USP25Q9UHP3 GDPD5-214ENST00000533784 2441 ntTSL 1 (best) BASIC20.69■□□□□ 0.9
USP25Q9UHP3 AC009102.3-201ENST00000623118 1491 ntBASIC20.69■□□□□ 0.9
USP25Q9UHP3 RND2-202ENST00000587250 4147 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
USP25Q9UHP3 ARHGEF18-201ENST00000319670 5212 ntAPPRIS P3 TSL 1 (best) BASIC20.69■□□□□ 0.9
USP25Q9UHP3 LUC7L-221ENST00000629543 1520 ntTSL 5 BASIC20.69■□□□□ 0.9
USP25Q9UHP3 MED9-201ENST00000268711 2228 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
USP25Q9UHP3 PAPD5-203ENST00000561678 2916 ntTSL 5 BASIC20.69■□□□□ 0.9
USP25Q9UHP3 SH2D2A-201ENST00000368198 1599 ntAPPRIS ALT2 TSL 1 (best) BASIC20.69■□□□□ 0.9
USP25Q9UHP3 FLOT2-202ENST00000394908 2618 ntAPPRIS P3 TSL 1 (best) BASIC20.69■□□□□ 0.9
USP25Q9UHP3 AC011676.5-201ENST00000624864 2660 ntBASIC20.69■□□□□ 0.9
USP25Q9UHP3 FNDC5-201ENST00000373471 2732 ntAPPRIS ALT2 TSL 2 BASIC20.69■□□□□ 0.9
USP25Q9UHP3 PEX26-203ENST00000428061 815 ntTSL 1 (best) BASIC20.69■□□□□ 0.9
USP25Q9UHP3 BX088651.1-201ENST00000540551 451 ntBASIC20.69■□□□□ 0.9
USP25Q9UHP3 AC079385.1-202ENST00000549203 569 ntTSL 4 BASIC20.69■□□□□ 0.9
USP25Q9UHP3 AC027796.4-201ENST00000575741 874 ntTSL 5 BASIC20.69■□□□□ 0.9
USP25Q9UHP3 NAT14-202ENST00000587400 416 ntTSL 5 BASIC20.69■□□□□ 0.9
USP25Q9UHP3 IMPA2-208ENST00000589238 923 ntTSL 3 BASIC20.69■□□□□ 0.9
USP25Q9UHP3 STK4-201ENST00000372801 2038 ntTSL 2 BASIC20.69■□□□□ 0.9
USP25Q9UHP3 FAM120AOS-201ENST00000375412 2771 ntAPPRIS P3 TSL 1 (best) BASIC20.69■□□□□ 0.9
USP25Q9UHP3 GAL3ST4-204ENST00000423751 1695 ntTSL 3 BASIC20.69■□□□□ 0.9
USP25Q9UHP3 ZNF211-201ENST00000240731 2440 ntAPPRIS P4 TSL 2 BASIC20.69■□□□□ 0.9
USP25Q9UHP3 DUS1L-201ENST00000306796 2068 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
USP25Q9UHP3 BTBD1-201ENST00000261721 3297 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
USP25Q9UHP3 TOM1L1-221ENST00000575882 2507 ntAPPRIS P2 TSL 1 (best) BASIC20.69■□□□□ 0.9
USP25Q9UHP3 EXTL3-201ENST00000220562 6483 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
USP25Q9UHP3 JAM2-202ENST00000400532 1757 ntAPPRIS ALT2 TSL 1 (best) BASIC20.69■□□□□ 0.9
USP25Q9UHP3 CD24-201ENST00000606017 2180 ntAPPRIS P3 TSL 1 (best) BASIC20.69■□□□□ 0.9
USP25Q9UHP3 NKILA-202ENST00000614771 2598 ntBASIC20.69■□□□□ 0.9
USP25Q9UHP3 ALDH3B1-204ENST00000614849 2280 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
USP25Q9UHP3 RAD1-202ENST00000341754 2341 ntAPPRIS P1 TSL 5 BASIC20.69■□□□□ 0.9
USP25Q9UHP3 PJA1-201ENST00000361478 2755 ntAPPRIS P4 TSL 1 (best) BASIC20.68■□□□□ 0.9
USP25Q9UHP3 KAZN-203ENST00000376030 6030 ntAPPRIS P1 TSL 5 BASIC20.68■□□□□ 0.9
USP25Q9UHP3 CLUH-201ENST00000435359 5224 ntAPPRIS P2 TSL 5 BASIC20.68■□□□□ 0.9
USP25Q9UHP3 ENOPH1-202ENST00000505846 1689 ntTSL 1 (best) BASIC20.68■□□□□ 0.9
Retrieved 100 of 98,524 protein–RNA pairs in 23.8 ms