Protein–RNA interactions for Protein: Q9CXF7

Chd1l, Chromodomain-helicase-DNA-binding protein 1-like, mousemouse

Predictions only

Length 900 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Chd1lQ9CXF7 Ociad2-204ENSMUST00000200830 2384 ntTSL 3 BASIC17.13■□□□□ 0.33
Chd1lQ9CXF7 Atp2a2-202ENSMUST00000177974 3984 ntAPPRIS ALT1 TSL 1 (best) BASIC17.13■□□□□ 0.33
Chd1lQ9CXF7 Ccdc27-201ENSMUST00000047207 2089 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
Chd1lQ9CXF7 Kcnh4-201ENSMUST00000107361 3748 ntAPPRIS P1 TSL 5 BASIC17.12■□□□□ 0.33
Chd1lQ9CXF7 Gm10125-203ENSMUST00000161096 3493 ntTSL 3 BASIC17.12■□□□□ 0.33
Chd1lQ9CXF7 Erich6-201ENSMUST00000041115 2195 ntAPPRIS P1 TSL 5 BASIC17.12■□□□□ 0.33
Chd1lQ9CXF7 Fgd1-201ENSMUST00000026296 4001 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
Chd1lQ9CXF7 Odf2-203ENSMUST00000113755 2305 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
Chd1lQ9CXF7 9330182L06Rik-202ENSMUST00000115348 3403 ntAPPRIS ALT2 TSL 1 (best) BASIC17.12■□□□□ 0.33
Chd1lQ9CXF7 Ybx1-201ENSMUST00000079644 1628 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
Chd1lQ9CXF7 AA467197-202ENSMUST00000110512 751 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
Chd1lQ9CXF7 Gm1818-201ENSMUST00000169406 1184 ntBASIC17.12■□□□□ 0.33
Chd1lQ9CXF7 Kcmf1-206ENSMUST00000206378 544 ntTSL 5 BASIC17.12■□□□□ 0.33
Chd1lQ9CXF7 4930554C24Rik-202ENSMUST00000216019 1159 ntTSL 5 BASIC17.12■□□□□ 0.33
Chd1lQ9CXF7 Sap30-201ENSMUST00000034022 1178 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
Chd1lQ9CXF7 Nup88-202ENSMUST00000108530 2389 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
Chd1lQ9CXF7 Ptk7-201ENSMUST00000044442 4255 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
Chd1lQ9CXF7 Stk33-202ENSMUST00000106745 2410 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
Chd1lQ9CXF7 Psma3-202ENSMUST00000160027 2846 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
Chd1lQ9CXF7 Cdk6-201ENSMUST00000042410 2470 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
Chd1lQ9CXF7 Adamts14-201ENSMUST00000092486 5188 ntAPPRIS P2 TSL 1 (best) BASIC17.12■□□□□ 0.33
Chd1lQ9CXF7 Nck1-202ENSMUST00000116522 4476 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
Chd1lQ9CXF7 Smpd3-202ENSMUST00000212896 2626 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
Chd1lQ9CXF7 Slc17a9-201ENSMUST00000094218 2275 ntAPPRIS P1 TSL 5 BASIC17.12■□□□□ 0.33
Chd1lQ9CXF7 Lysmd3-201ENSMUST00000049055 2338 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
Chd1lQ9CXF7 Rgs14-201ENSMUST00000063771 2356 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
Chd1lQ9CXF7 Sirt5-206ENSMUST00000221481 1548 ntTSL 5 BASIC17.11■□□□□ 0.33
Chd1lQ9CXF7 Tyk2-205ENSMUST00000214864 1662 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
Chd1lQ9CXF7 Tacc3-201ENSMUST00000074849 2669 ntAPPRIS ALT2 TSL 1 (best) BASIC17.11■□□□□ 0.33
Chd1lQ9CXF7 Sept8-207ENSMUST00000147912 1742 ntAPPRIS ALT2 TSL 5 BASIC17.11■□□□□ 0.33
Chd1lQ9CXF7 1700024G13Rik-201ENSMUST00000100723 850 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
Chd1lQ9CXF7 Rab3d-202ENSMUST00000119055 694 ntTSL 3 BASIC17.11■□□□□ 0.33
Chd1lQ9CXF7 Rps15-ps2-201ENSMUST00000121788 438 ntBASIC17.11■□□□□ 0.33
Chd1lQ9CXF7 1810012K08Rik-201ENSMUST00000155199 574 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
Chd1lQ9CXF7 Insig2-203ENSMUST00000159085 1252 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
Chd1lQ9CXF7 Pantr2-201ENSMUST00000180589 463 ntTSL 3 BASIC17.11■□□□□ 0.33
Chd1lQ9CXF7 Chmp2a-203ENSMUST00000210587 930 ntAPPRIS P1 TSL 3 BASIC17.11■□□□□ 0.33
Chd1lQ9CXF7 Npcd-201ENSMUST00000023060 1162 ntAPPRIS ALT2 TSL 1 (best) BASIC17.11■□□□□ 0.33
Chd1lQ9CXF7 Mrps28-201ENSMUST00000042148 783 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
Chd1lQ9CXF7 4930451I11Rik-201ENSMUST00000061695 481 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
Chd1lQ9CXF7 Olfr601-201ENSMUST00000080474 990 ntAPPRIS P1 BASIC17.11■□□□□ 0.33
Chd1lQ9CXF7 Upf1-202ENSMUST00000215817 4518 ntAPPRIS ALT2 TSL 1 (best) BASIC17.11■□□□□ 0.33
Chd1lQ9CXF7 Atp13a3-201ENSMUST00000061350 7220 ntAPPRIS ALT2 TSL 5 BASIC17.11■□□□□ 0.33
Chd1lQ9CXF7 Gtdc1-202ENSMUST00000100127 2422 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
Chd1lQ9CXF7 Scap-201ENSMUST00000098350 4227 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
Chd1lQ9CXF7 Zar1-201ENSMUST00000073528 1429 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
Chd1lQ9CXF7 Tinf2-205ENSMUST00000227842 2001 ntAPPRIS ALT2 BASIC17.11■□□□□ 0.33
Chd1lQ9CXF7 Ckb-201ENSMUST00000001304 1472 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
Chd1lQ9CXF7 Cgnl1-203ENSMUST00000122065 4487 ntAPPRIS P2 TSL 1 (best) BASIC17.11■□□□□ 0.33
Chd1lQ9CXF7 Atg4d-201ENSMUST00000065005 5951 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
Chd1lQ9CXF7 Ptprm-202ENSMUST00000223982 4802 ntAPPRIS P2 BASIC17.1■□□□□ 0.33
Chd1lQ9CXF7 Cbln4-201ENSMUST00000087950 2902 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
Chd1lQ9CXF7 Anks1-203ENSMUST00000114842 5610 ntAPPRIS P3 TSL 1 (best) BASIC17.1■□□□□ 0.33
Chd1lQ9CXF7 Pola2-201ENSMUST00000025752 2424 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
Chd1lQ9CXF7 Actg1-204ENSMUST00000106215 1827 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
Chd1lQ9CXF7 Ptprs-211ENSMUST00000223859 5588 ntBASIC17.1■□□□□ 0.33
Chd1lQ9CXF7 Oas1a-201ENSMUST00000080322 1885 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
Chd1lQ9CXF7 Gemin5-202ENSMUST00000102711 4919 ntAPPRIS ALT2 TSL 5 BASIC17.1■□□□□ 0.33
Chd1lQ9CXF7 Slc8a3-203ENSMUST00000182208 3433 ntAPPRIS P3 TSL 1 (best) BASIC17.1■□□□□ 0.33
Chd1lQ9CXF7 Ctps-201ENSMUST00000030381 2705 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
Chd1lQ9CXF7 4930402H24Rik-202ENSMUST00000110243 1984 ntAPPRIS ALT2 TSL 1 (best) BASIC17.1■□□□□ 0.33
Chd1lQ9CXF7 Poli-202ENSMUST00000121674 2778 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
Chd1lQ9CXF7 Mrpl36-203ENSMUST00000222030 680 ntAPPRIS P1 TSL 3 BASIC17.1■□□□□ 0.33
Chd1lQ9CXF7 Mrpl21-201ENSMUST00000025743 802 ntAPPRIS ALT2 TSL 1 (best) BASIC17.1■□□□□ 0.33
Chd1lQ9CXF7 Romo1-201ENSMUST00000088610 569 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
Chd1lQ9CXF7 St3gal3-202ENSMUST00000097912 2143 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
Chd1lQ9CXF7 C530025M09Rik-201ENSMUST00000099264 690 ntAPPRIS P1 BASIC17.1■□□□□ 0.33
Chd1lQ9CXF7 Fam159b-201ENSMUST00000043061 1310 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
Chd1lQ9CXF7 Arpc1b-201ENSMUST00000085679 3105 ntAPPRIS P2 TSL 1 (best) BASIC17.1■□□□□ 0.33
Chd1lQ9CXF7 Trim32-201ENSMUST00000050850 3194 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
Chd1lQ9CXF7 2410002F23Rik-218ENSMUST00000188382 2301 ntAPPRIS P2 TSL 5 BASIC17.1■□□□□ 0.33
Chd1lQ9CXF7 Pcdha1-201ENSMUST00000070797 5248 ntAPPRIS P2 TSL 1 (best) BASIC17.1■□□□□ 0.33
Chd1lQ9CXF7 Tmc8-201ENSMUST00000050874 2577 ntAPPRIS P3 TSL 1 (best) BASIC17.1■□□□□ 0.33
Chd1lQ9CXF7 Spcs2-210ENSMUST00000209032 1610 ntTSL 5 BASIC17.1■□□□□ 0.33
Chd1lQ9CXF7 Rapsn-201ENSMUST00000050323 1606 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
Chd1lQ9CXF7 Hoxb5-201ENSMUST00000049272 1895 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
Chd1lQ9CXF7 Cfap45-201ENSMUST00000085894 1908 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
Chd1lQ9CXF7 Rxra-202ENSMUST00000100251 1952 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
Chd1lQ9CXF7 Tfdp2-201ENSMUST00000034982 7354 ntAPPRIS P3 TSL 1 (best) BASIC17.09■□□□□ 0.33
Chd1lQ9CXF7 Spon2-201ENSMUST00000046186 2045 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
Chd1lQ9CXF7 4921514A10Rik-201ENSMUST00000181450 2114 ntTSL 5 BASIC17.09■□□□□ 0.33
Chd1lQ9CXF7 Pld3-201ENSMUST00000117095 2282 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
Chd1lQ9CXF7 Pld3-202ENSMUST00000117611 2297 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
Chd1lQ9CXF7 Rcbtb1-202ENSMUST00000043227 3903 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
Chd1lQ9CXF7 Tfe3-201ENSMUST00000077680 3277 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
Chd1lQ9CXF7 Izumo1r-204ENSMUST00000121116 726 ntTSL 2 BASIC17.09■□□□□ 0.33
Chd1lQ9CXF7 Gm20675-201ENSMUST00000175861 338 ntTSL 3 BASIC17.09■□□□□ 0.33
Chd1lQ9CXF7 Cldn14-205ENSMUST00000177648 1266 ntAPPRIS P1 TSL 2 BASIC17.09■□□□□ 0.33
Chd1lQ9CXF7 Gm38392-202ENSMUST00000165196 1303 ntAPPRIS P5 TSL 5 BASIC17.09■□□□□ 0.33
Chd1lQ9CXF7 Edn2-201ENSMUST00000030384 1462 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
Chd1lQ9CXF7 Pitpnm1-202ENSMUST00000100022 4512 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
Chd1lQ9CXF7 Pde7b-205ENSMUST00000169404 1697 ntAPPRIS ALT2 TSL 5 BASIC17.09■□□□□ 0.33
Chd1lQ9CXF7 Fgf17-201ENSMUST00000022697 1689 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
Chd1lQ9CXF7 Tmx4-201ENSMUST00000038228 5488 ntAPPRIS P2 TSL 1 (best) BASIC17.09■□□□□ 0.33
Chd1lQ9CXF7 Pcyox1l-201ENSMUST00000025472 2017 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
Chd1lQ9CXF7 Gm37019-201ENSMUST00000192133 2134 ntBASIC17.09■□□□□ 0.33
Chd1lQ9CXF7 Abi3-201ENSMUST00000059026 4006 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
Chd1lQ9CXF7 Papd5-203ENSMUST00000119033 4624 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
Chd1lQ9CXF7 Slc12a5-201ENSMUST00000099092 6028 ntAPPRIS P2 TSL 1 (best) BASIC17.09■□□□□ 0.33
Chd1lQ9CXF7 Camta1-202ENSMUST00000097774 8533 ntAPPRIS ALT2 TSL 5 BASIC17.09■□□□□ 0.33
Retrieved 100 of 76,532 protein–RNA pairs in 27.4 ms