Protein–RNA interactions for Protein: Q99523

SORT1, Sortilin, humanhuman

Predictions only

Length 831 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SORT1Q99523 MIR3180-4-201ENST00000582223 153 ntBASIC17.61■□□□□ 0.41
SORT1Q99523 RNF112-201ENST00000461366 3212 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
SORT1Q99523 IGFBP3-203ENST00000381086 2322 ntTSL 2 BASIC17.61■□□□□ 0.41
SORT1Q99523 CHRNA5-201ENST00000299565 3623 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
SORT1Q99523 LRRC23-209ENST00000443597 1628 ntAPPRIS P4 TSL 1 (best) BASIC17.61■□□□□ 0.41
SORT1Q99523 USP32-201ENST00000300896 5171 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
SORT1Q99523 ACBD5-201ENST00000375888 1747 ntAPPRIS ALT2 TSL 5 BASIC17.61■□□□□ 0.41
SORT1Q99523 PACRGL-203ENST00000444671 1720 ntTSL 2 BASIC17.61■□□□□ 0.41
SORT1Q99523 AL731569.1-201ENST00000428940 3058 ntTSL 2 BASIC17.61■□□□□ 0.41
SORT1Q99523 QKI-201ENST00000275262 6964 ntTSL 1 (best) BASIC17.61■□□□□ 0.41
SORT1Q99523 DMKN-201ENST00000339686 1927 ntAPPRIS P3 TSL 1 (best) BASIC17.6■□□□□ 0.41
SORT1Q99523 TBC1D2-202ENST00000375063 2100 ntTSL 1 (best) BASIC17.6■□□□□ 0.41
SORT1Q99523 TLE2-217ENST00000590536 2344 ntAPPRIS ALT2 TSL 1 (best) BASIC17.6■□□□□ 0.41
SORT1Q99523 MEST-202ENST00000341441 2443 ntAPPRIS ALT1 TSL 1 (best) BASIC17.6■□□□□ 0.41
SORT1Q99523 TMEM189-UBE2V1-201ENST00000341698 2757 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
SORT1Q99523 TRAM1-205ENST00000521425 3394 ntTSL 2 BASIC17.6■□□□□ 0.41
SORT1Q99523 MCAT-202ENST00000327555 1134 ntTSL 1 (best) BASIC17.6■□□□□ 0.41
SORT1Q99523 MRPL54-201ENST00000330133 626 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
SORT1Q99523 AL445685.1-201ENST00000425802 762 ntTSL 3 BASIC17.6■□□□□ 0.41
SORT1Q99523 AC012618.3-203ENST00000426044 917 ntTSL 2 BASIC17.6■□□□□ 0.41
SORT1Q99523 MAGI2-AS3-211ENST00000451809 707 ntTSL 3 BASIC17.6■□□□□ 0.41
SORT1Q99523 ZNF706-206ENST00000519744 785 ntTSL 3 BASIC17.6■□□□□ 0.41
SORT1Q99523 AC009065.1-201ENST00000564055 1225 ntBASIC17.6■□□□□ 0.41
SORT1Q99523 TGIF1-222ENST00000577543 729 ntTSL 3 BASIC17.6■□□□□ 0.41
SORT1Q99523 SPIB-206ENST00000596074 847 ntTSL 2 BASIC17.6■□□□□ 0.41
SORT1Q99523 AC003005.1-201ENST00000601674 582 ntAPPRIS P5 TSL 2 BASIC17.6■□□□□ 0.41
SORT1Q99523 REXO1L10P-201ENST00000615707 1290 ntBASIC17.6■□□□□ 0.41
SORT1Q99523 REXO1L12P-201ENST00000622156 912 ntBASIC17.6■□□□□ 0.41
SORT1Q99523 TXNL1-211ENST00000590954 1339 ntAPPRIS P1 TSL 2 BASIC17.6■□□□□ 0.41
SORT1Q99523 CARD10-202ENST00000403299 4113 ntAPPRIS P1 TSL 5 BASIC17.6■□□□□ 0.41
SORT1Q99523 TAB2-209ENST00000637181 4230 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
SORT1Q99523 AC002310.5-201ENST00000569360 1515 ntAPPRIS P1 TSL 2 BASIC17.6■□□□□ 0.41
SORT1Q99523 EIF2AK3-201ENST00000303236 4646 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
SORT1Q99523 WDR18-202ENST00000585809 1608 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
SORT1Q99523 C17orf62-203ENST00000434650 2050 ntTSL 2 BASIC17.6■□□□□ 0.41
SORT1Q99523 KLHL24-201ENST00000242810 2345 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
SORT1Q99523 SNX17-210ENST00000537606 2400 ntTSL 2 BASIC17.6■□□□□ 0.41
SORT1Q99523 HNRNPM-217ENST00000620401 2458 ntAPPRIS ALT2 TSL 1 (best) BASIC17.6■□□□□ 0.41
SORT1Q99523 PTPA-203ENST00000348141 2737 ntTSL 5 BASIC17.6■□□□□ 0.41
SORT1Q99523 PTPA-207ENST00000393370 2737 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
SORT1Q99523 DPF2-205ENST00000528416 2799 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
SORT1Q99523 MYB-205ENST00000367814 3302 ntAPPRIS P3 TSL 1 (best) BASIC17.6■□□□□ 0.41
SORT1Q99523 JAK2-201ENST00000381652 5285 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
SORT1Q99523 AC112229.1-202ENST00000490013 2918 ntTSL 2 BASIC17.59■□□□□ 0.41
SORT1Q99523 PAPD5-203ENST00000561678 2916 ntTSL 5 BASIC17.59■□□□□ 0.41
SORT1Q99523 FAM174B-201ENST00000327355 2792 ntAPPRIS P2 TSL 1 (best) BASIC17.59■□□□□ 0.41
SORT1Q99523 SYTL3-203ENST00000367081 2692 ntAPPRIS P3 TSL 5 BASIC17.59■□□□□ 0.41
SORT1Q99523 ZNF454-201ENST00000320129 2332 ntAPPRIS P1 TSL 2 BASIC17.59■□□□□ 0.41
SORT1Q99523 NAGPA-201ENST00000312251 2202 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
SORT1Q99523 MVK-201ENST00000228510 1956 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
SORT1Q99523 FDXR-205ENST00000544854 1827 ntTSL 2 BASIC17.59■□□□□ 0.41
SORT1Q99523 PRRT2-219ENST00000637565 1733 ntTSL 5 BASIC17.59■□□□□ 0.41
SORT1Q99523 TBC1D10C-209ENST00000542590 1659 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
SORT1Q99523 CAMK4-210ENST00000512453 1640 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
SORT1Q99523 MRAS-204ENST00000464896 1534 ntTSL 2 BASIC17.59■□□□□ 0.41
SORT1Q99523 AL135905.2-201ENST00000584934 1404 ntBASIC17.59■□□□□ 0.41
SORT1Q99523 TMEM191C-214ENST00000621561 1337 ntAPPRIS P2 TSL 5 BASIC17.59■□□□□ 0.41
SORT1Q99523 HAS3-201ENST00000219322 1163 ntTSL 1 (best) BASIC17.59■□□□□ 0.41
SORT1Q99523 EMC6-201ENST00000248378 653 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
SORT1Q99523 NDUFS6-201ENST00000274137 1082 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
SORT1Q99523 SFXN1-203ENST00000502393 637 ntTSL 2 BASIC17.59■□□□□ 0.41
SORT1Q99523 AC098864.1-204ENST00000513752 805 ntTSL 4 BASIC17.59■□□□□ 0.41
SORT1Q99523 SLC22A3-201ENST00000275300 3348 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
SORT1Q99523 MAP3K8-207ENST00000542547 2782 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
SORT1Q99523 CDK11B-207ENST00000626918 2457 ntTSL 5 BASIC17.59■□□□□ 0.41
SORT1Q99523 SLC52A1-201ENST00000254853 2377 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
SORT1Q99523 KCNQ5-203ENST00000355635 6623 ntAPPRIS ALT1 TSL 5 BASIC17.59■□□□□ 0.41
SORT1Q99523 YARS2-201ENST00000324868 2122 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
SORT1Q99523 TSNARE1-204ENST00000519651 2110 ntAPPRIS ALT2 TSL 1 (best) BASIC17.59■□□□□ 0.41
SORT1Q99523 SH2B1-202ENST00000337120 6043 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
SORT1Q99523 HPGD-213ENST00000541923 2920 ntTSL 2 BASIC17.58■□□□□ 0.41
SORT1Q99523 CACNA1A-218ENST00000635895 8657 ntAPPRIS ALT2 TSL 5 BASIC17.58■□□□□ 0.41
SORT1Q99523 CACNA1A-257ENST00000638009 8665 ntAPPRIS ALT2 TSL 1 (best) BASIC17.58■□□□□ 0.41
SORT1Q99523 HLA-J-201ENST00000462773 1622 ntBASIC17.58■□□□□ 0.41
SORT1Q99523 LINC00595-204ENST00000434974 2692 ntTSL 2 BASIC17.58■□□□□ 0.41
SORT1Q99523 RASA2-202ENST00000452898 2562 ntAPPRIS ALT2 TSL 5 BASIC17.58■□□□□ 0.41
SORT1Q99523 LUC7L-204ENST00000397783 1504 ntTSL 2 BASIC17.58■□□□□ 0.41
SORT1Q99523 RASSF7-205ENST00000454668 1450 ntAPPRIS ALT2 TSL 1 (best) BASIC17.58■□□□□ 0.41
SORT1Q99523 OSGIN1-202ENST00000361711 2230 ntAPPRIS P1 TSL 2 BASIC17.58■□□□□ 0.4
SORT1Q99523 CCDC7-203ENST00000362006 2133 ntAPPRIS P2 TSL 1 (best) BASIC17.58■□□□□ 0.4
SORT1Q99523 PRR31-201ENST00000371629 978 ntTSL 2 BASIC17.58■□□□□ 0.4
SORT1Q99523 TNNT3-206ENST00000381579 1042 ntAPPRIS ALT2 TSL 1 (best) BASIC17.58■□□□□ 0.4
SORT1Q99523 UBB-203ENST00000395839 1012 ntAPPRIS P1 TSL 2 BASIC17.58■□□□□ 0.4
SORT1Q99523 MRPL53-202ENST00000409710 386 ntTSL 2 BASIC17.58■□□□□ 0.4
SORT1Q99523 AC008825.1-201ENST00000504398 452 ntTSL 3 BASIC17.58■□□□□ 0.4
SORT1Q99523 C14orf144-201ENST00000553757 537 ntTSL 4 BASIC17.58■□□□□ 0.4
SORT1Q99523 AC100839.1-201ENST00000559589 577 ntTSL 4 BASIC17.58■□□□□ 0.4
SORT1Q99523 ETFA-216ENST00000560726 942 ntTSL 3 BASIC17.58■□□□□ 0.4
SORT1Q99523 SLC9A3R2-208ENST00000566198 1199 ntTSL 2 BASIC17.58■□□□□ 0.4
SORT1Q99523 AL353719.1-201ENST00000566847 864 ntBASIC17.58■□□□□ 0.4
SORT1Q99523 METTL23-208ENST00000588822 1049 ntTSL 3 BASIC17.58■□□□□ 0.4
SORT1Q99523 FAM197Y4-202ENST00000622692 608 ntBASIC17.58■□□□□ 0.4
SORT1Q99523 AC112497.1-201ENST00000624824 639 ntBASIC17.58■□□□□ 0.4
SORT1Q99523 TCTEX1D1-201ENST00000282670 2001 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
SORT1Q99523 DFNA5-203ENST00000409970 2005 ntTSL 5 BASIC17.58■□□□□ 0.4
SORT1Q99523 ARF1-214ENST00000541182 2006 ntAPPRIS P1 TSL 2 BASIC17.58■□□□□ 0.4
SORT1Q99523 SERPINA4-202ENST00000555095 1987 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
SORT1Q99523 RUNX1-203ENST00000358356 2720 ntTSL 1 (best) BASIC17.58■□□□□ 0.4
SORT1Q99523 DIP2A-205ENST00000466639 2711 ntTSL 1 (best) BASIC17.58■□□□□ 0.4
SORT1Q99523 ARSE-201ENST00000381134 1853 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
Retrieved 100 of 98,524 protein–RNA pairs in 47.4 ms