Protein–RNA interactions for Protein: Q6P9F0

CCDC62, Coiled-coil domain-containing protein 62, humanhuman

Predictions only

Length 684 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC62Q6P9F0 CEP78-202ENST00000376597 2618 ntAPPRIS P4 TSL 1 (best) BASIC20.25■□□□□ 0.83
CCDC62Q6P9F0 GMCL1P1-201ENST00000463439 1581 ntBASIC20.25■□□□□ 0.83
CCDC62Q6P9F0 C5orf30-203ENST00000515669 1573 ntAPPRIS P1 TSL 3 BASIC20.25■□□□□ 0.83
CCDC62Q6P9F0 SLC9A6-202ENST00000370698 4631 ntTSL 1 (best) BASIC20.25■□□□□ 0.83
CCDC62Q6P9F0 MBD1-208ENST00000398493 1845 ntTSL 5 BASIC20.25■□□□□ 0.83
CCDC62Q6P9F0 WWOX-203ENST00000406884 1701 ntTSL 1 (best) BASIC20.25■□□□□ 0.83
CCDC62Q6P9F0 NUTM2D-201ENST00000381697 3290 ntAPPRIS P5 TSL 1 (best) BASIC20.25■□□□□ 0.83
CCDC62Q6P9F0 PAN3-AS1-201ENST00000563843 1351 ntBASIC20.25■□□□□ 0.83
CCDC62Q6P9F0 PDXK-219ENST00000621478 1967 ntTSL 1 (best) BASIC20.25■□□□□ 0.83
CCDC62Q6P9F0 PLAUR-201ENST00000221264 1610 ntAPPRIS ALT2 TSL 1 (best) BASIC20.25■□□□□ 0.83
CCDC62Q6P9F0 ATP1B1-201ENST00000367815 1883 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
CCDC62Q6P9F0 SATB1-AS1-201ENST00000414198 737 ntTSL 2 BASIC20.25■□□□□ 0.83
CCDC62Q6P9F0 RBSN-204ENST00000449050 903 ntTSL 2 BASIC20.25■□□□□ 0.83
CCDC62Q6P9F0 PRSS21-202ENST00000450020 1106 ntTSL 1 (best) BASIC20.25■□□□□ 0.83
CCDC62Q6P9F0 C1orf109-203ENST00000464085 919 ntAPPRIS P1 TSL 2 BASIC20.25■□□□□ 0.83
CCDC62Q6P9F0 AF186996.4-201ENST00000467186 377 ntBASIC20.25■□□□□ 0.83
CCDC62Q6P9F0 RNPS1P1-201ENST00000507437 918 ntBASIC20.25■□□□□ 0.83
CCDC62Q6P9F0 AC015712.1-203ENST00000559331 593 ntTSL 3 BASIC20.25■□□□□ 0.83
CCDC62Q6P9F0 RNPS1-222ENST00000567147 830 ntTSL 3 BASIC20.25■□□□□ 0.83
CCDC62Q6P9F0 ANO2-212ENST00000612575 1087 ntTSL 1 (best) BASIC20.25■□□□□ 0.83
CCDC62Q6P9F0 LRRC36-201ENST00000329956 2395 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
CCDC62Q6P9F0 MCC-208ENST00000514701 2855 ntTSL 2 BASIC20.25■□□□□ 0.83
CCDC62Q6P9F0 FAM157B-201ENST00000446912 1795 ntTSL 2 BASIC20.25■□□□□ 0.83
CCDC62Q6P9F0 SEPT11-201ENST00000264893 5593 ntAPPRIS P2 TSL 1 (best) BASIC20.25■□□□□ 0.83
CCDC62Q6P9F0 LTBP1-203ENST00000404816 6333 ntAPPRIS P4 TSL 5 BASIC20.25■□□□□ 0.83
CCDC62Q6P9F0 LPCAT3-201ENST00000261407 2268 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
CCDC62Q6P9F0 ARFIP2-203ENST00000423813 1430 ntTSL 2 BASIC20.25■□□□□ 0.83
CCDC62Q6P9F0 TMEM8B-204ENST00000439587 2150 ntTSL 1 (best) BASIC20.25■□□□□ 0.83
CCDC62Q6P9F0 PRSS36-202ENST00000418068 2446 ntTSL 2 BASIC20.25■□□□□ 0.83
CCDC62Q6P9F0 FDXR-205ENST00000544854 1827 ntTSL 2 BASIC20.25■□□□□ 0.83
CCDC62Q6P9F0 IL9RP2-201ENST00000423948 1312 ntBASIC20.25■□□□□ 0.83
CCDC62Q6P9F0 CCDC188-201ENST00000439765 1475 ntAPPRIS P1 TSL 5 BASIC20.24■□□□□ 0.83
CCDC62Q6P9F0 DHRS7B-206ENST00000579303 1479 ntAPPRIS ALT1 TSL 5 BASIC20.24■□□□□ 0.83
CCDC62Q6P9F0 FDFT1-226ENST00000623368 2368 ntTSL 2 BASIC20.24■□□□□ 0.83
CCDC62Q6P9F0 FAM206A-201ENST00000322940 2134 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
CCDC62Q6P9F0 TMTC1-203ENST00000539277 2758 ntAPPRIS P2 TSL 1 (best) BASIC20.24■□□□□ 0.83
CCDC62Q6P9F0 ARSE-201ENST00000381134 1853 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
CCDC62Q6P9F0 LINC02381-201ENST00000508564 1369 ntTSL 1 (best) BASIC20.24■□□□□ 0.83
CCDC62Q6P9F0 ZIC4-212ENST00000484399 1774 ntAPPRIS P1 TSL 2 BASIC20.24■□□□□ 0.83
CCDC62Q6P9F0 BX323043.1-201ENST00000641006 1765 ntBASIC20.24■□□□□ 0.83
CCDC62Q6P9F0 AC135782.1-201ENST00000537498 2154 ntTSL 2 BASIC20.24■□□□□ 0.83
CCDC62Q6P9F0 DRD5-201ENST00000304374 2330 ntAPPRIS P1 BASIC20.24■□□□□ 0.83
CCDC62Q6P9F0 GAS6-201ENST00000327773 2490 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
CCDC62Q6P9F0 TRAPPC12-202ENST00000382110 2483 ntAPPRIS P2 TSL 2 BASIC20.24■□□□□ 0.83
CCDC62Q6P9F0 TLE1-202ENST00000376484 666 ntTSL 3 BASIC20.24■□□□□ 0.83
CCDC62Q6P9F0 DRAP1-202ENST00000376991 819 ntTSL 5 BASIC20.24■□□□□ 0.83
CCDC62Q6P9F0 FAM3A-205ENST00000393572 1041 ntTSL 2 BASIC20.24■□□□□ 0.83
CCDC62Q6P9F0 TTLL12-204ENST00000494035 888 ntTSL 2 BASIC20.24■□□□□ 0.83
CCDC62Q6P9F0 MCCC2-205ENST00000509358 1214 ntTSL 1 (best) BASIC20.24■□□□□ 0.83
CCDC62Q6P9F0 AC135776.2-201ENST00000567803 714 ntTSL 4 BASIC20.24■□□□□ 0.83
CCDC62Q6P9F0 AC011498.3-201ENST00000590159 569 ntTSL 4 BASIC20.24■□□□□ 0.83
CCDC62Q6P9F0 LINC01607-201ENST00000607172 621 ntTSL 2 BASIC20.24■□□□□ 0.83
CCDC62Q6P9F0 CHST13-202ENST00000615522 1146 ntTSL 5 BASIC20.24■□□□□ 0.83
CCDC62Q6P9F0 AATK-203ENST00000417379 5081 ntAPPRIS ALT2 TSL 1 (best) BASIC20.24■□□□□ 0.83
CCDC62Q6P9F0 KIF25-AS1-201ENST00000414364 1420 ntTSL 2 BASIC20.24■□□□□ 0.83
CCDC62Q6P9F0 AP005117.1-201ENST00000584346 1413 ntBASIC20.24■□□□□ 0.83
CCDC62Q6P9F0 TMPRSS5-205ENST00000538955 1956 ntAPPRIS ALT2 TSL 1 (best) BASIC20.24■□□□□ 0.83
CCDC62Q6P9F0 LARP4-210ENST00000522085 1577 ntTSL 2 BASIC20.24■□□□□ 0.83
CCDC62Q6P9F0 AC027312.1-201ENST00000523591 1571 ntTSL 5 BASIC20.24■□□□□ 0.83
CCDC62Q6P9F0 CLDN14-203ENST00000399136 1330 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
CCDC62Q6P9F0 SAMD5-201ENST00000367474 6089 ntAPPRIS P1 TSL 2 BASIC20.24■□□□□ 0.83
CCDC62Q6P9F0 ZNF554-201ENST00000317243 2736 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
CCDC62Q6P9F0 FIP1L1-202ENST00000337488 2198 ntTSL 1 (best) BASIC20.24■□□□□ 0.83
CCDC62Q6P9F0 SYBU-232ENST00000533171 2498 ntAPPRIS ALT2 TSL 2 BASIC20.24■□□□□ 0.83
CCDC62Q6P9F0 SMARCD1-201ENST00000381513 3237 ntTSL 1 (best) BASIC20.23■□□□□ 0.83
CCDC62Q6P9F0 CPXM2-204ENST00000615851 2512 ntTSL 5 BASIC20.23■□□□□ 0.83
CCDC62Q6P9F0 TRIB3-202ENST00000422053 1533 ntAPPRIS ALT2 TSL 2 BASIC20.23■□□□□ 0.83
CCDC62Q6P9F0 GTF2H4-202ENST00000376316 1673 ntAPPRIS P1 TSL 5 BASIC20.23■□□□□ 0.83
CCDC62Q6P9F0 AC126763.1-201ENST00000552015 2118 ntBASIC20.23■□□□□ 0.83
CCDC62Q6P9F0 FPGS-203ENST00000373247 2279 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
CCDC62Q6P9F0 TIGD6-202ENST00000515406 2429 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
CCDC62Q6P9F0 DHRSX-201ENST00000334651 2571 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
CCDC62Q6P9F0 STRBP-201ENST00000348403 3337 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
CCDC62Q6P9F0 METRN-204ENST00000568223 3325 ntAPPRIS P2 TSL 1 (best) BASIC20.23■□□□□ 0.83
CCDC62Q6P9F0 IQSEC1-201ENST00000273221 5279 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
CCDC62Q6P9F0 ESPNP-201ENST00000270691 2015 ntBASIC20.23■□□□□ 0.83
CCDC62Q6P9F0 FCN3-201ENST00000270879 1030 ntAPPRIS P4 TSL 1 (best) BASIC20.23■□□□□ 0.83
CCDC62Q6P9F0 SUV39H2-202ENST00000354919 1233 ntAPPRIS ALT2 TSL 5 BASIC20.23■□□□□ 0.83
CCDC62Q6P9F0 FCN3-202ENST00000354982 997 ntAPPRIS ALT2 TSL 1 (best) BASIC20.23■□□□□ 0.83
CCDC62Q6P9F0 ROMO1-203ENST00000374077 422 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
CCDC62Q6P9F0 SDCBP2-204ENST00000381812 1550 ntAPPRIS P1 TSL 5 BASIC20.23■□□□□ 0.83
CCDC62Q6P9F0 GGT1-207ENST00000404532 853 ntTSL 1 (best) BASIC20.23■□□□□ 0.83
CCDC62Q6P9F0 HNRNPDP1-201ENST00000439535 754 ntBASIC20.23■□□□□ 0.83
CCDC62Q6P9F0 ABCD1P5-201ENST00000445663 754 ntBASIC20.23■□□□□ 0.83
CCDC62Q6P9F0 C16orf89-202ENST00000472572 1444 ntAPPRIS ALT2 TSL 1 (best) BASIC20.23■□□□□ 0.83
CCDC62Q6P9F0 AP000688.1-201ENST00000535199 1221 ntTSL 2 BASIC20.23■□□□□ 0.83
CCDC62Q6P9F0 MYL6-203ENST00000536128 1221 ntTSL 2 BASIC20.23■□□□□ 0.83
CCDC62Q6P9F0 MTUS2-205ENST00000542829 1165 ntTSL 1 (best) BASIC20.23■□□□□ 0.83
CCDC62Q6P9F0 AC009041.2-206ENST00000563863 1728 ntTSL 2 BASIC20.23■□□□□ 0.83
CCDC62Q6P9F0 AC026336.2-201ENST00000563922 763 ntTSL 2 BASIC20.23■□□□□ 0.83
CCDC62Q6P9F0 SPINT1-AS1-203ENST00000565315 629 ntTSL 2 BASIC20.23■□□□□ 0.83
CCDC62Q6P9F0 AGAP5-203ENST00000581191 2779 ntAPPRIS ALT2 TSL 5 BASIC20.23■□□□□ 0.83
CCDC62Q6P9F0 ECSIT-207ENST00000588998 818 ntTSL 3 BASIC20.23■□□□□ 0.83
CCDC62Q6P9F0 SIKE1-201ENST00000060969 2190 ntAPPRIS P3 TSL 1 (best) BASIC20.23■□□□□ 0.83
CCDC62Q6P9F0 AF228730.7-201ENST00000641842 219 ntBASIC20.23■□□□□ 0.83
CCDC62Q6P9F0 UBTF-203ENST00000393606 2683 ntTSL 1 (best) BASIC20.23■□□□□ 0.83
CCDC62Q6P9F0 JMJD6-202ENST00000397625 1603 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
CCDC62Q6P9F0 TJP1-208ENST00000495972 2890 ntTSL 1 (best) BASIC20.23■□□□□ 0.83
CCDC62Q6P9F0 C8orf46-215ENST00000522977 1347 ntTSL 2 BASIC20.23■□□□□ 0.83
CCDC62Q6P9F0 ERI1-203ENST00000519292 2107 ntAPPRIS P1 TSL 2 BASIC20.23■□□□□ 0.83
Retrieved 100 of 98,524 protein–RNA pairs in 25.7 ms