Protein–RNA interactions for Protein: O00555

CACNA1A, Voltage-dependent P/Q-type calcium channel subunit alpha-1A, humanhuman

Predictions only

Length 2,505 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CACNA1AO00555 AIPL1-209ENST00000575265 2111 ntAPPRIS ALT2 TSL 1 (best) BASIC16.86■□□□□ 0.29
CACNA1AO00555 TNNT1-209ENST00000587758 1016 ntAPPRIS ALT2 TSL 1 (best) BASIC16.86■□□□□ 0.29
CACNA1AO00555 PDZD7-201ENST00000370215 2032 ntTSL 2 BASIC16.86■□□□□ 0.29
CACNA1AO00555 FDFT1-210ENST00000525954 1890 ntTSL 2 BASIC16.86■□□□□ 0.29
CACNA1AO00555 PYCR3-207ENST00000495276 2332 ntAPPRIS ALT2 TSL 1 (best) BASIC16.86■□□□□ 0.29
CACNA1AO00555 CPLX3-201ENST00000395018 2082 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
CACNA1AO00555 MYBPH-201ENST00000255416 1805 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
CACNA1AO00555 SSR1-204ENST00000474597 1808 ntTSL 5 BASIC16.86■□□□□ 0.29
CACNA1AO00555 PSMA7-201ENST00000370858 925 ntTSL 2 BASIC16.86■□□□□ 0.29
CACNA1AO00555 NFKBIB-202ENST00000392079 991 ntTSL 5 BASIC16.86■□□□□ 0.29
CACNA1AO00555 AL512384.1-201ENST00000406683 331 ntBASIC16.86■□□□□ 0.29
CACNA1AO00555 CTBP1-AS2-204ENST00000514984 533 ntTSL 4 BASIC16.86■□□□□ 0.29
CACNA1AO00555 TPGS2-215ENST00000590842 1239 ntTSL 2 BASIC16.86■□□□□ 0.29
CACNA1AO00555 AL158211.3-201ENST00000607385 239 ntBASIC16.86■□□□□ 0.29
CACNA1AO00555 LEXM-201ENST00000358193 1777 ntAPPRIS P3 TSL 1 (best) BASIC16.86■□□□□ 0.29
CACNA1AO00555 DDX19B-207ENST00000563206 1765 ntTSL 5 BASIC16.86■□□□□ 0.29
CACNA1AO00555 FBXW4P1-201ENST00000426721 2239 ntBASIC16.85■□□□□ 0.29
CACNA1AO00555 TNFSF9-201ENST00000245817 1665 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
CACNA1AO00555 SSX2IP-203ENST00000437941 5843 ntTSL 2 BASIC16.85■□□□□ 0.29
CACNA1AO00555 GNB3-201ENST00000229264 1923 ntAPPRIS P3 TSL 5 BASIC16.85■□□□□ 0.29
CACNA1AO00555 UBXN6-201ENST00000301281 1943 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
CACNA1AO00555 AC138969.3-201ENST00000546612 1459 ntBASIC16.85■□□□□ 0.29
CACNA1AO00555 AC138932.2-201ENST00000548268 1459 ntBASIC16.85■□□□□ 0.29
CACNA1AO00555 AC126755.4-201ENST00000549796 1459 ntBASIC16.85■□□□□ 0.29
CACNA1AO00555 TSPAN4-205ENST00000397406 1426 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
CACNA1AO00555 PTHLH-203ENST00000395872 1318 ntAPPRIS ALT1 TSL 5 BASIC16.85■□□□□ 0.29
CACNA1AO00555 LINC02415-201ENST00000508505 1315 ntTSL 1 (best) BASIC16.85■□□□□ 0.29
CACNA1AO00555 LGALS2-201ENST00000215886 591 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
CACNA1AO00555 YBEY-202ENST00000339195 890 ntTSL 1 (best) BASIC16.85■□□□□ 0.29
CACNA1AO00555 DBNDD2-205ENST00000372717 1207 ntTSL 5 BASIC16.85■□□□□ 0.29
CACNA1AO00555 VCPKMT-201ENST00000395859 795 ntTSL 1 (best) BASIC16.85■□□□□ 0.29
CACNA1AO00555 KRT18P65-201ENST00000439811 1286 ntBASIC16.85■□□□□ 0.29
CACNA1AO00555 LINC01089-211ENST00000543334 1282 ntTSL 4 BASIC16.85■□□□□ 0.29
CACNA1AO00555 C12orf57-206ENST00000544681 980 ntTSL 2 BASIC16.85■□□□□ 0.29
CACNA1AO00555 TSPAN11-204ENST00000546076 1058 ntAPPRIS P1 TSL 2 BASIC16.85■□□□□ 0.29
CACNA1AO00555 IGHV3OR16-16-201ENST00000563644 343 ntBASIC16.85■□□□□ 0.29
CACNA1AO00555 CYB561-217ENST00000582997 877 ntTSL 5 BASIC16.85■□□□□ 0.29
CACNA1AO00555 AC010522.1-205ENST00000598031 606 ntAPPRIS P1 TSL 3 BASIC16.85■□□□□ 0.29
CACNA1AO00555 ELMOD1-202ENST00000443271 1990 ntAPPRIS P1 TSL 2 BASIC16.85■□□□□ 0.29
CACNA1AO00555 ANAPC4-201ENST00000315368 2685 ntAPPRIS P3 TSL 1 (best) BASIC16.85■□□□□ 0.29
CACNA1AO00555 UAP1-201ENST00000271469 2377 ntAPPRIS ALT1 TSL 5 BASIC16.85■□□□□ 0.29
CACNA1AO00555 LINGO3-201ENST00000585527 2241 ntAPPRIS P1 BASIC16.85■□□□□ 0.29
CACNA1AO00555 BEST2-201ENST00000042931 1908 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
CACNA1AO00555 DUSP7-202ENST00000495880 3340 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
CACNA1AO00555 GUCA1A-202ENST00000372958 1575 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
CACNA1AO00555 COLEC11-206ENST00000403096 1557 ntTSL 1 (best) BASIC16.85■□□□□ 0.29
CACNA1AO00555 GULP1-209ENST00000410051 1595 ntTSL 1 (best) BASIC16.85■□□□□ 0.29
CACNA1AO00555 FOS-206ENST00000555347 1280 ntTSL 2 BASIC16.85■□□□□ 0.29
CACNA1AO00555 AQP8-202ENST00000566125 1276 ntTSL 1 (best) BASIC16.85■□□□□ 0.29
CACNA1AO00555 PPP1R13B-201ENST00000202556 4958 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
CACNA1AO00555 FBP1-201ENST00000375326 1462 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
CACNA1AO00555 CHADL-201ENST00000216241 2533 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
CACNA1AO00555 CACNG8-201ENST00000270458 8747 ntAPPRIS ALT2 TSL 1 (best) BASIC16.84■□□□□ 0.29
CACNA1AO00555 THOP1-202ENST00000395212 1877 ntTSL 2 BASIC16.84■□□□□ 0.29
CACNA1AO00555 B9D1-209ENST00000477478 1353 ntTSL 3 BASIC16.84■□□□□ 0.29
CACNA1AO00555 UBAP1-204ENST00000625521 2029 ntTSL 2 BASIC16.84■□□□□ 0.29
CACNA1AO00555 PSMD5-203ENST00000373904 1538 ntTSL 2 BASIC16.84■□□□□ 0.29
CACNA1AO00555 TSSK5P-201ENST00000423978 907 ntBASIC16.84■□□□□ 0.29
CACNA1AO00555 AL513327.2-201ENST00000432703 490 ntTSL 2 BASIC16.84■□□□□ 0.29
CACNA1AO00555 ECSIT-207ENST00000588998 818 ntTSL 3 BASIC16.84■□□□□ 0.29
CACNA1AO00555 RAB34-224ENST00000636513 888 ntTSL 5 BASIC16.84■□□□□ 0.29
CACNA1AO00555 PGLYRP1-201ENST00000008938 720 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
CACNA1AO00555 TMEM74-201ENST00000297459 1741 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
CACNA1AO00555 DDX55-205ENST00000538744 1735 ntTSL 5 BASIC16.84■□□□□ 0.29
CACNA1AO00555 AC009041.2-206ENST00000563863 1728 ntTSL 2 BASIC16.84■□□□□ 0.29
CACNA1AO00555 G6PD-202ENST00000393562 2631 ntAPPRIS P3 TSL 1 (best) BASIC16.84■□□□□ 0.29
CACNA1AO00555 G6PD-211ENST00000621232 2631 ntAPPRIS ALT2 TSL 1 (best) BASIC16.84■□□□□ 0.29
CACNA1AO00555 INHA-201ENST00000243786 1468 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
CACNA1AO00555 MEDAG-201ENST00000380482 2374 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
CACNA1AO00555 PLAUR-201ENST00000221264 1610 ntAPPRIS ALT2 TSL 1 (best) BASIC16.84■□□□□ 0.29
CACNA1AO00555 AC148477.5-201ENST00000625164 1645 ntBASIC16.84■□□□□ 0.29
CACNA1AO00555 ASCL5-201ENST00000449188 2026 ntAPPRIS P1 TSL 3 BASIC16.84■□□□□ 0.29
CACNA1AO00555 SORBS3-221ENST00000523965 2028 ntTSL 1 (best) BASIC16.84■□□□□ 0.29
CACNA1AO00555 CLDN6-201ENST00000328796 1369 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
CACNA1AO00555 SYT5-202ENST00000537500 2612 ntAPPRIS P1 TSL 2 BASIC16.84■□□□□ 0.29
CACNA1AO00555 FADS2-209ENST00000521849 1703 ntTSL 1 (best) BASIC16.84■□□□□ 0.29
CACNA1AO00555 DYRK1B-201ENST00000323039 2535 ntAPPRIS P3 TSL 1 (best) BASIC16.84■□□□□ 0.29
CACNA1AO00555 SIGLEC8-202ENST00000340550 1293 ntTSL 1 (best) BASIC16.84■□□□□ 0.29
CACNA1AO00555 WFDC3-204ENST00000372632 704 ntTSL 3 BASIC16.84■□□□□ 0.29
CACNA1AO00555 RPL13A-201ENST00000391857 1181 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
CACNA1AO00555 AL355306.1-201ENST00000415580 579 ntBASIC16.84■□□□□ 0.29
CACNA1AO00555 AL512638.1-201ENST00000457493 794 ntBASIC16.84■□□□□ 0.29
CACNA1AO00555 RAB43P1-201ENST00000561790 589 ntBASIC16.84■□□□□ 0.29
CACNA1AO00555 NCKAP1-201ENST00000360982 4989 ntTSL 1 (best) BASIC16.83■□□□□ 0.29
CACNA1AO00555 HGFAC-204ENST00000511533 2016 ntTSL 1 (best) BASIC16.83■□□□□ 0.29
CACNA1AO00555 FAM110A-201ENST00000246100 1619 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.29
CACNA1AO00555 CORO6-212ENST00000584969 1416 ntAPPRIS ALT1 TSL 5 BASIC16.83■□□□□ 0.29
CACNA1AO00555 MMP28-201ENST00000605424 1928 ntAPPRIS P3 TSL 1 (best) BASIC16.83■□□□□ 0.29
CACNA1AO00555 DAPK3-202ENST00000545797 2257 ntAPPRIS P1 TSL 2 BASIC16.83■□□□□ 0.29
CACNA1AO00555 ULK3-217ENST00000568667 1470 ntTSL 5 BASIC16.83■□□□□ 0.28
CACNA1AO00555 PPP1R27-201ENST00000330261 782 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
CACNA1AO00555 MB-201ENST00000359787 1170 ntAPPRIS P1 TSL 2 BASIC16.83■□□□□ 0.28
CACNA1AO00555 AKNA-205ENST00000374079 2138 ntTSL 1 (best) BASIC16.83■□□□□ 0.28
CACNA1AO00555 MB-202ENST00000397326 1197 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
CACNA1AO00555 MB-203ENST00000397328 1153 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
CACNA1AO00555 CENPM-203ENST00000402338 1002 ntTSL 2 BASIC16.83■□□□□ 0.28
CACNA1AO00555 NABP2-201ENST00000267023 1417 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
CACNA1AO00555 EIF2B4-210ENST00000493344 1949 ntTSL 5 BASIC16.83■□□□□ 0.28
CACNA1AO00555 CSNK1D-204ENST00000398519 1580 ntTSL 5 BASIC16.83■□□□□ 0.28
CACNA1AO00555 ANXA8-208ENST00000611843 2174 ntTSL 2 BASIC16.83■□□□□ 0.28
Retrieved 100 of 98,524 protein–RNA pairs in 43.5 ms