Protein–RNA interactions for Protein: A6NKD9

CCDC85C, Coiled-coil domain-containing protein 85C, humanhuman

Predictions only

Length 419 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC85CA6NKD9 TRAM2-AS1-204ENST00000606714 2453 ntTSL 2 BASIC19.86■□□□□ 0.77
CCDC85CA6NKD9 LINC01205-202ENST00000497996 1493 ntTSL 2 BASIC19.86■□□□□ 0.77
CCDC85CA6NKD9 MAG-201ENST00000361922 2426 ntAPPRIS ALT2 TSL 1 (best) BASIC19.86■□□□□ 0.77
CCDC85CA6NKD9 CBX3P2-201ENST00000579647 1429 ntTSL 2 BASIC19.86■□□□□ 0.77
CCDC85CA6NKD9 NAPRT-203ENST00000435154 1877 ntTSL 2 BASIC19.86■□□□□ 0.77
CCDC85CA6NKD9 IMPDH1-208ENST00000470772 1888 ntAPPRIS ALT1 TSL 5 BASIC19.86■□□□□ 0.77
CCDC85CA6NKD9 ESYT2-201ENST00000251527 5960 ntAPPRIS P2 TSL 1 (best) BASIC19.86■□□□□ 0.77
CCDC85CA6NKD9 FAM151B-201ENST00000282226 1717 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
CCDC85CA6NKD9 LSM1-201ENST00000311351 1147 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
CCDC85CA6NKD9 TNNC2-201ENST00000372555 710 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
CCDC85CA6NKD9 TNNC2-202ENST00000372557 780 ntTSL 3 BASIC19.86■□□□□ 0.77
CCDC85CA6NKD9 ELK2AP-201ENST00000392510 1007 ntBASIC19.86■□□□□ 0.77
CCDC85CA6NKD9 LINC01818-201ENST00000437118 368 ntTSL 2 BASIC19.86■□□□□ 0.77
CCDC85CA6NKD9 AC139149.1-202ENST00000442532 783 ntTSL 3 BASIC19.86■□□□□ 0.77
CCDC85CA6NKD9 AC009908.1-201ENST00000523030 412 ntTSL 3 BASIC19.86■□□□□ 0.77
CCDC85CA6NKD9 AC005330.1-201ENST00000590086 1238 ntTSL 5 BASIC19.86■□□□□ 0.77
CCDC85CA6NKD9 COQ10A-201ENST00000308197 1652 ntAPPRIS P3 TSL 1 (best) BASIC19.86■□□□□ 0.77
CCDC85CA6NKD9 FEZF1-203ENST00000442488 2099 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
CCDC85CA6NKD9 UBAP1-204ENST00000625521 2029 ntTSL 2 BASIC19.86■□□□□ 0.77
CCDC85CA6NKD9 ABHD17C-201ENST00000258884 2368 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
CCDC85CA6NKD9 COLEC11-206ENST00000403096 1557 ntTSL 1 (best) BASIC19.86■□□□□ 0.77
CCDC85CA6NKD9 RBM4B-203ENST00000525754 2339 ntAPPRIS P1 TSL 2 BASIC19.86■□□□□ 0.77
CCDC85CA6NKD9 ASL-204ENST00000395331 1538 ntTSL 5 BASIC19.86■□□□□ 0.77
CCDC85CA6NKD9 LBX2-AS1-201ENST00000548978 1852 ntTSL 3 BASIC19.86■□□□□ 0.77
CCDC85CA6NKD9 AC138969.3-201ENST00000546612 1459 ntBASIC19.86■□□□□ 0.77
CCDC85CA6NKD9 AC138932.2-201ENST00000548268 1459 ntBASIC19.86■□□□□ 0.77
CCDC85CA6NKD9 AC126755.4-201ENST00000549796 1459 ntBASIC19.86■□□□□ 0.77
CCDC85CA6NKD9 SACM1L-202ENST00000418611 2164 ntTSL 2 BASIC19.85■□□□□ 0.77
CCDC85CA6NKD9 C19orf66-201ENST00000253110 2117 ntAPPRIS P3 TSL 2 BASIC19.85■□□□□ 0.77
CCDC85CA6NKD9 ATAD3A-203ENST00000378756 2492 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
CCDC85CA6NKD9 DDX55-205ENST00000538744 1735 ntTSL 5 BASIC19.85■□□□□ 0.77
CCDC85CA6NKD9 AC009041.2-206ENST00000563863 1728 ntTSL 2 BASIC19.85■□□□□ 0.77
CCDC85CA6NKD9 KCNJ12-202ENST00000583088 5425 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
CCDC85CA6NKD9 NEIL2-202ENST00000403422 2016 ntTSL 2 BASIC19.85■□□□□ 0.77
CCDC85CA6NKD9 GNB3-201ENST00000229264 1923 ntAPPRIS P3 TSL 5 BASIC19.85■□□□□ 0.77
CCDC85CA6NKD9 COX6A1-201ENST00000229379 572 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
CCDC85CA6NKD9 RPF1-202ENST00000370656 724 ntTSL 2 BASIC19.85■□□□□ 0.77
CCDC85CA6NKD9 AMACR-202ENST00000382068 862 ntTSL 1 (best) BASIC19.85■□□□□ 0.77
CCDC85CA6NKD9 AC007952.1-201ENST00000399087 553 ntTSL 1 (best) BASIC19.85■□□□□ 0.77
CCDC85CA6NKD9 AC007952.2-202ENST00000399093 556 ntTSL 1 (best) BASIC19.85■□□□□ 0.77
CCDC85CA6NKD9 CEP19-201ENST00000399942 1172 ntAPPRIS ALT2 TSL 5 BASIC19.85■□□□□ 0.77
CCDC85CA6NKD9 AC124057.1-201ENST00000433035 404 ntTSL 5 BASIC19.85■□□□□ 0.77
CCDC85CA6NKD9 AL627443.1-201ENST00000456477 1035 ntTSL 3 BASIC19.85■□□□□ 0.77
CCDC85CA6NKD9 PPP1R14B-203ENST00000542235 920 ntTSL 1 (best) BASIC19.85■□□□□ 0.77
CCDC85CA6NKD9 ZNF606-202ENST00000546715 636 ntTSL 4 BASIC19.85■□□□□ 0.77
CCDC85CA6NKD9 AL162274.1-201ENST00000617191 1098 ntBASIC19.85■□□□□ 0.77
CCDC85CA6NKD9 SBDS-205ENST00000617799 953 ntAPPRIS ALT1 TSL 5 BASIC19.85■□□□□ 0.77
CCDC85CA6NKD9 AD001527.2-201ENST00000622994 785 ntBASIC19.85■□□□□ 0.77
CCDC85CA6NKD9 AC106017.2-202ENST00000628484 536 ntTSL 1 (best) BASIC19.85■□□□□ 0.77
CCDC85CA6NKD9 BRWD1-202ENST00000341322 2495 ntTSL 1 (best) BASIC19.85■□□□□ 0.77
CCDC85CA6NKD9 DPM2-201ENST00000314392 1542 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
CCDC85CA6NKD9 REXO1L6P-201ENST00000603433 1515 ntBASIC19.85■□□□□ 0.77
CCDC85CA6NKD9 UAP1-201ENST00000271469 2377 ntAPPRIS ALT1 TSL 5 BASIC19.85■□□□□ 0.77
CCDC85CA6NKD9 CBWD1-201ENST00000314367 1771 ntTSL 1 (best) BASIC19.85■□□□□ 0.77
CCDC85CA6NKD9 C21orf58-205ENST00000397683 1674 ntAPPRIS ALT2 TSL 2 BASIC19.84■□□□□ 0.77
CCDC85CA6NKD9 AP2M1-201ENST00000292807 1931 ntAPPRIS P4 TSL 5 BASIC19.84■□□□□ 0.77
CCDC85CA6NKD9 EIF2B4-210ENST00000493344 1949 ntTSL 5 BASIC19.84■□□□□ 0.77
CCDC85CA6NKD9 ITPRIPL1-205ENST00000536814 1947 ntAPPRIS P1 TSL 3 BASIC19.84■□□□□ 0.77
CCDC85CA6NKD9 PIP5KL1-202ENST00000388747 2198 ntAPPRIS P1 TSL 5 BASIC19.84■□□□□ 0.77
CCDC85CA6NKD9 FDFT1-210ENST00000525954 1890 ntTSL 2 BASIC19.84■□□□□ 0.77
CCDC85CA6NKD9 ARX-201ENST00000379044 2876 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
CCDC85CA6NKD9 SRP19-201ENST00000282999 937 ntTSL 1 (best) BASIC19.84■□□□□ 0.77
CCDC85CA6NKD9 PRDX5-202ENST00000347941 463 ntTSL 1 (best) BASIC19.84■□□□□ 0.77
CCDC85CA6NKD9 AL160408.2-201ENST00000436039 693 ntTSL 3 BASIC19.84■□□□□ 0.77
CCDC85CA6NKD9 AL355140.1-201ENST00000457328 398 ntTSL 5 BASIC19.84■□□□□ 0.77
CCDC85CA6NKD9 CTBP1-AS2-204ENST00000514984 533 ntTSL 4 BASIC19.84■□□□□ 0.77
CCDC85CA6NKD9 FAM86C2P-203ENST00000528684 1004 ntBASIC19.84■□□□□ 0.77
CCDC85CA6NKD9 AP001995.1-201ENST00000531784 1157 ntTSL 4 BASIC19.84■□□□□ 0.77
CCDC85CA6NKD9 AC138466.1-201ENST00000535242 391 ntTSL 3 BASIC19.84■□□□□ 0.77
CCDC85CA6NKD9 LINC01089-211ENST00000543334 1282 ntTSL 4 BASIC19.84■□□□□ 0.77
CCDC85CA6NKD9 MARVELD3-206ENST00000567566 850 ntAPPRIS ALT2 TSL 1 (best) BASIC19.84■□□□□ 0.77
CCDC85CA6NKD9 MYMX-202ENST00000576476 682 ntAPPRIS P1 TSL 3 BASIC19.84■□□□□ 0.77
CCDC85CA6NKD9 SSH2-210ENST00000582084 560 ntTSL 3 BASIC19.84■□□□□ 0.77
CCDC85CA6NKD9 AC011498.3-201ENST00000590159 569 ntTSL 4 BASIC19.84■□□□□ 0.77
CCDC85CA6NKD9 AL033527.4-201ENST00000641026 673 ntBASIC19.84■□□□□ 0.77
CCDC85CA6NKD9 CACNG8-201ENST00000270458 8747 ntAPPRIS ALT2 TSL 1 (best) BASIC19.84■□□□□ 0.77
CCDC85CA6NKD9 FBXL20-205ENST00000583610 1739 ntAPPRIS P1 TSL 2 BASIC19.84■□□□□ 0.77
CCDC85CA6NKD9 SNAP91-211ENST00000520213 2168 ntTSL 1 (best) BASIC19.84■□□□□ 0.77
CCDC85CA6NKD9 DMRT2-209ENST00000635183 2190 ntTSL 5 BASIC19.84■□□□□ 0.77
CCDC85CA6NKD9 MRM3-201ENST00000304478 1809 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.77
CCDC85CA6NKD9 ANKRD65-201ENST00000427211 1976 ntTSL 1 (best) BASIC19.83■□□□□ 0.77
CCDC85CA6NKD9 TOP1MT-218ENST00000523676 1982 ntTSL 5 BASIC19.83■□□□□ 0.77
CCDC85CA6NKD9 G6PD-202ENST00000393562 2631 ntAPPRIS P3 TSL 1 (best) BASIC19.83■□□□□ 0.77
CCDC85CA6NKD9 G6PD-211ENST00000621232 2631 ntAPPRIS ALT2 TSL 1 (best) BASIC19.83■□□□□ 0.77
CCDC85CA6NKD9 RBFOX1-215ENST00000553186 2196 ntTSL 1 (best) BASIC19.83■□□□□ 0.77
CCDC85CA6NKD9 AC092933.1-201ENST00000393644 945 ntBASIC19.83■□□□□ 0.77
CCDC85CA6NKD9 CYSRT1-201ENST00000409414 1297 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.77
CCDC85CA6NKD9 AL020989.1-201ENST00000422979 469 ntBASIC19.83■□□□□ 0.77
CCDC85CA6NKD9 AC073130.2-202ENST00000444244 842 ntTSL 3 BASIC19.83■□□□□ 0.77
CCDC85CA6NKD9 AC112698.1-201ENST00000510299 916 ntBASIC19.83■□□□□ 0.77
CCDC85CA6NKD9 MRNIP-212ENST00000520698 902 ntAPPRIS ALT2 TSL 2 BASIC19.83■□□□□ 0.77
CCDC85CA6NKD9 FKBP11-208ENST00000550765 1030 ntAPPRIS P3 TSL 1 (best) BASIC19.83■□□□□ 0.77
CCDC85CA6NKD9 IL32-232ENST00000552356 623 ntAPPRIS ALT2 TSL 3 BASIC19.83■□□□□ 0.77
CCDC85CA6NKD9 GMFG-207ENST00000598034 1028 ntAPPRIS ALT1 TSL 1 (best) BASIC19.83■□□□□ 0.77
CCDC85CA6NKD9 GPR182-203ENST00000622922 591 ntBASIC19.83■□□□□ 0.77
CCDC85CA6NKD9 AL805961.1-202ENST00000641562 540 ntBASIC19.83■□□□□ 0.77
CCDC85CA6NKD9 PGLYRP1-201ENST00000008938 720 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.77
CCDC85CA6NKD9 BAZ1A-201ENST00000358716 5920 ntTSL 1 (best) BASIC19.83■□□□□ 0.76
CCDC85CA6NKD9 INHA-201ENST00000243786 1468 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.76
CCDC85CA6NKD9 RARA-202ENST00000394081 2285 ntTSL 1 (best) BASIC19.83■□□□□ 0.76
Retrieved 100 of 98,524 protein–RNA pairs in 43.7 ms