Protein–RNA interactions for Protein: A6NFC5

TMEM235, Transmembrane protein 235, humanhuman

Predictions only

Length 223 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM235A6NFC5 RAD1-202ENST00000341754 2341 ntAPPRIS P1 TSL 5 BASIC15.46■□□□□ 0.07
TMEM235A6NFC5 AC009102.3-201ENST00000623118 1491 ntBASIC15.46■□□□□ 0.07
TMEM235A6NFC5 AL355312.1-201ENST00000407115 2176 ntBASIC15.46■□□□□ 0.07
TMEM235A6NFC5 MINK1-202ENST00000355280 4961 ntAPPRIS P4 TSL 1 (best) BASIC15.46■□□□□ 0.07
TMEM235A6NFC5 NDRG2-208ENST00000397851 2022 ntAPPRIS P4 TSL 2 BASIC15.46■□□□□ 0.07
TMEM235A6NFC5 GABRB2-206ENST00000520240 2030 ntAPPRIS P1 TSL 1 (best) BASIC15.46■□□□□ 0.07
TMEM235A6NFC5 GOLGA2P9-203ENST00000600260 2033 ntTSL 1 (best) BASIC15.46■□□□□ 0.07
TMEM235A6NFC5 GRAP2-202ENST00000407075 1304 ntAPPRIS P1 TSL 1 (best) BASIC15.46■□□□□ 0.07
TMEM235A6NFC5 NKILA-202ENST00000614771 2598 ntBASIC15.46■□□□□ 0.07
TMEM235A6NFC5 ZNF584-209ENST00000599238 2288 ntTSL 1 (best) BASIC15.46■□□□□ 0.07
TMEM235A6NFC5 AC011676.5-201ENST00000624864 2660 ntBASIC15.46■□□□□ 0.07
TMEM235A6NFC5 DUS3L-201ENST00000309061 2113 ntAPPRIS P3 TSL 1 (best) BASIC15.46■□□□□ 0.07
TMEM235A6NFC5 WWTR1-201ENST00000360632 2103 ntAPPRIS P1 TSL 1 (best) BASIC15.46■□□□□ 0.07
TMEM235A6NFC5 PODXL-202ENST00000378555 2105 ntAPPRIS P3 TSL 1 (best) BASIC15.46■□□□□ 0.07
TMEM235A6NFC5 ZBTB11-202ENST00000461821 2115 ntTSL 1 (best) BASIC15.46■□□□□ 0.07
TMEM235A6NFC5 SLC22A11-202ENST00000377581 1975 ntTSL 5 BASIC15.46■□□□□ 0.07
TMEM235A6NFC5 SNX1-208ENST00000559844 1971 ntAPPRIS P1 TSL 1 (best) BASIC15.46■□□□□ 0.07
TMEM235A6NFC5 KIAA1147-202ENST00000536163 7296 ntAPPRIS P1 TSL 1 (best) BASIC15.46■□□□□ 0.07
TMEM235A6NFC5 DHRS4-201ENST00000313250 1443 ntAPPRIS P1 TSL 1 (best) BASIC15.46■□□□□ 0.07
TMEM235A6NFC5 LIFR-202ENST00000453190 4253 ntAPPRIS P1 TSL 2 BASIC15.46■□□□□ 0.07
TMEM235A6NFC5 TPD52L1-213ENST00000534000 2356 ntAPPRIS P3 TSL 1 (best) BASIC15.46■□□□□ 0.07
TMEM235A6NFC5 DOK4-201ENST00000340099 2772 ntAPPRIS P1 TSL 1 (best) BASIC15.46■□□□□ 0.07
TMEM235A6NFC5 PTGER3-208ENST00000370932 1841 ntAPPRIS ALT2 TSL 5 BASIC15.46■□□□□ 0.07
TMEM235A6NFC5 RAMP2-201ENST00000253796 780 ntAPPRIS P2 TSL 1 (best) BASIC15.46■□□□□ 0.07
TMEM235A6NFC5 CLDND2-201ENST00000291715 974 ntAPPRIS P1 TSL 1 (best) BASIC15.46■□□□□ 0.07
TMEM235A6NFC5 YWHAZ-209ENST00000419477 891 ntAPPRIS P1 TSL 3 BASIC15.46■□□□□ 0.07
TMEM235A6NFC5 RNA5SP413-201ENST00000516373 109 ntBASIC15.46■□□□□ 0.07
TMEM235A6NFC5 AC026271.3-201ENST00000571884 352 ntBASIC15.46■□□□□ 0.07
TMEM235A6NFC5 NDUFA6-AS1-207ENST00000595777 833 ntTSL 5 BASIC15.46■□□□□ 0.07
TMEM235A6NFC5 HOXB6-201ENST00000225648 1660 ntAPPRIS P1 TSL 1 (best) BASIC15.46■□□□□ 0.07
TMEM235A6NFC5 UVSSA-209ENST00000512728 1668 ntAPPRIS ALT2 TSL 1 (best) BASIC15.46■□□□□ 0.07
TMEM235A6NFC5 KCTD20-202ENST00000373731 5619 ntAPPRIS P1 TSL 1 (best) BASIC15.46■□□□□ 0.07
TMEM235A6NFC5 TFAP2E-201ENST00000373235 2189 ntAPPRIS P1 TSL 1 (best) BASIC15.46■□□□□ 0.07
TMEM235A6NFC5 NEIL1-221ENST00000569035 1797 ntAPPRIS P1 TSL 1 (best) BASIC15.46■□□□□ 0.07
TMEM235A6NFC5 SOCS7-201ENST00000612932 7857 ntAPPRIS P1 TSL 1 (best) BASIC15.46■□□□□ 0.06
TMEM235A6NFC5 FAM118A-202ENST00000405673 1612 ntTSL 5 BASIC15.46■□□□□ 0.06
TMEM235A6NFC5 ACAP1-201ENST00000158762 2512 ntAPPRIS P1 TSL 1 (best) BASIC15.46■□□□□ 0.06
TMEM235A6NFC5 TSKS-201ENST00000246801 1883 ntAPPRIS P2 TSL 1 (best) BASIC15.46■□□□□ 0.06
TMEM235A6NFC5 KRT8-201ENST00000293308 1882 ntAPPRIS P1 TSL 5 BASIC15.46■□□□□ 0.06
TMEM235A6NFC5 ZFP3-201ENST00000318833 5206 ntAPPRIS P1 TSL 1 (best) BASIC15.46■□□□□ 0.06
TMEM235A6NFC5 IFNLR1-202ENST00000327575 1476 ntAPPRIS ALT2 TSL 1 (best) BASIC15.46■□□□□ 0.06
TMEM235A6NFC5 ETV2-203ENST00000402764 1487 ntAPPRIS P3 TSL 1 (best) BASIC15.46■□□□□ 0.06
TMEM235A6NFC5 AC008393.1-201ENST00000499601 1454 ntTSL 1 (best) BASIC15.46■□□□□ 0.06
TMEM235A6NFC5 ETV7-202ENST00000340181 1719 ntAPPRIS P3 TSL 1 (best) BASIC15.46■□□□□ 0.06
TMEM235A6NFC5 ARHGAP4-204ENST00000393721 2721 ntTSL 5 BASIC15.45■□□□□ 0.06
TMEM235A6NFC5 CFC1-202ENST00000615342 1554 ntTSL 5 BASIC15.45■□□□□ 0.06
TMEM235A6NFC5 CFC1B-202ENST00000619050 1554 ntTSL 5 BASIC15.45■□□□□ 0.06
TMEM235A6NFC5 LINC00602-201ENST00000629776 2065 ntBASIC15.45■□□□□ 0.06
TMEM235A6NFC5 AC026954.2-202ENST00000575474 2571 ntAPPRIS P5 TSL 5 BASIC15.45■□□□□ 0.06
TMEM235A6NFC5 PTCH1-201ENST00000331920 8057 ntAPPRIS P1 TSL 5 BASIC15.45■□□□□ 0.06
TMEM235A6NFC5 CAP2-208ENST00000611958 2686 ntTSL 2 BASIC15.45■□□□□ 0.06
TMEM235A6NFC5 CREB3L1-206ENST00000621158 2687 ntAPPRIS P1 TSL 1 (best) BASIC15.45■□□□□ 0.06
TMEM235A6NFC5 ETNK2-202ENST00000367201 2431 ntAPPRIS ALT2 TSL 2 BASIC15.45■□□□□ 0.06
TMEM235A6NFC5 MFSD2A-203ENST00000420632 1914 ntTSL 2 BASIC15.45■□□□□ 0.06
TMEM235A6NFC5 TRAK2-202ENST00000430254 1436 ntTSL 2 BASIC15.45■□□□□ 0.06
TMEM235A6NFC5 FAM120AOS-201ENST00000375412 2771 ntAPPRIS P3 TSL 1 (best) BASIC15.45■□□□□ 0.06
TMEM235A6NFC5 SLC25A29-215ENST00000556505 1540 ntTSL 2 BASIC15.45■□□□□ 0.06
TMEM235A6NFC5 NCOA5-201ENST00000290231 3220 ntAPPRIS P1 TSL 1 (best) BASIC15.45■□□□□ 0.06
TMEM235A6NFC5 NDUFA8-201ENST00000373768 844 ntAPPRIS P1 TSL 1 (best) BASIC15.45■□□□□ 0.06
TMEM235A6NFC5 AC133681.1-201ENST00000465482 601 ntBASIC15.45■□□□□ 0.06
TMEM235A6NFC5 IAH1-215ENST00000497473 1266 ntAPPRIS P1 TSL 1 (best) BASIC15.45■□□□□ 0.06
TMEM235A6NFC5 FAM86C2P-201ENST00000525180 435 ntTSL 4 BASIC15.45■□□□□ 0.06
TMEM235A6NFC5 AC004771.5-201ENST00000575985 542 ntTSL 4 BASIC15.45■□□□□ 0.06
TMEM235A6NFC5 KRTAP5-11-203ENST00000617152 558 ntAPPRIS ALT2 TSL 5 BASIC15.45■□□□□ 0.06
TMEM235A6NFC5 CR392000.1-201ENST00000624770 1228 ntBASIC15.45■□□□□ 0.06
TMEM235A6NFC5 AL031985.4-201ENST00000642138 673 ntBASIC15.45■□□□□ 0.06
TMEM235A6NFC5 MARCH1-203ENST00000503008 5877 ntAPPRIS P1 TSL 1 (best) BASIC15.45■□□□□ 0.06
TMEM235A6NFC5 TCTN1-204ENST00000397659 1885 ntAPPRIS P4 TSL 1 (best) BASIC15.45■□□□□ 0.06
TMEM235A6NFC5 FAM110A-201ENST00000246100 1619 ntAPPRIS P1 TSL 1 (best) BASIC15.45■□□□□ 0.06
TMEM235A6NFC5 EIF4E1B-201ENST00000318682 1974 ntAPPRIS P1 TSL 5 BASIC15.45■□□□□ 0.06
TMEM235A6NFC5 TOX2-205ENST00000423191 1709 ntTSL 2 BASIC15.45■□□□□ 0.06
TMEM235A6NFC5 WIPF2-210ENST00000585043 2693 ntAPPRIS P2 TSL 1 (best) BASIC15.45■□□□□ 0.06
TMEM235A6NFC5 C1orf56-201ENST00000368926 2096 ntAPPRIS P1 TSL 1 (best) BASIC15.45■□□□□ 0.06
TMEM235A6NFC5 LINC01569-202ENST00000573042 2093 ntTSL 2 BASIC15.45■□□□□ 0.06
TMEM235A6NFC5 PCK2-205ENST00000558096 2433 ntTSL 2 BASIC15.45■□□□□ 0.06
TMEM235A6NFC5 TRIM73-202ENST00000430211 1321 ntAPPRIS ALT2 TSL 2 BASIC15.44■□□□□ 0.06
TMEM235A6NFC5 MTCL1-205ENST00000517570 6009 ntAPPRIS ALT2 TSL 1 (best) BASIC15.44■□□□□ 0.06
TMEM235A6NFC5 MAFB-201ENST00000373313 3393 ntAPPRIS P1 BASIC15.44■□□□□ 0.06
TMEM235A6NFC5 EXO5-202ENST00000358527 1892 ntAPPRIS P1 TSL 1 (best) BASIC15.44■□□□□ 0.06
TMEM235A6NFC5 FIBCD1-201ENST00000372337 1868 ntTSL 5 BASIC15.44■□□□□ 0.06
TMEM235A6NFC5 AL163051.1-201ENST00000569214 1512 ntBASIC15.44■□□□□ 0.06
TMEM235A6NFC5 PLD3-205ENST00000409419 1966 ntAPPRIS P1 TSL 5 BASIC15.44■□□□□ 0.06
TMEM235A6NFC5 UNC13A-206ENST00000552293 5314 ntAPPRIS ALT2 TSL 5 BASIC15.44■□□□□ 0.06
TMEM235A6NFC5 PRR18-201ENST00000322583 3084 ntAPPRIS P2 BASIC15.44■□□□□ 0.06
TMEM235A6NFC5 NFATC4-215ENST00000554661 2631 ntAPPRIS ALT2 TSL 1 (best) BASIC15.44■□□□□ 0.06
TMEM235A6NFC5 UBE2R2-201ENST00000263228 4075 ntAPPRIS P1 TSL 1 (best) BASIC15.44■□□□□ 0.06
TMEM235A6NFC5 FBXO7-201ENST00000266087 2195 ntAPPRIS P1 TSL 1 (best) BASIC15.44■□□□□ 0.06
TMEM235A6NFC5 MFSD2A-201ENST00000372809 2173 ntTSL 2 BASIC15.44■□□□□ 0.06
TMEM235A6NFC5 SSB-201ENST00000260956 1709 ntAPPRIS P1 TSL 1 (best) BASIC15.44■□□□□ 0.06
TMEM235A6NFC5 MIR149-201ENST00000384879 89 ntBASIC15.44■□□□□ 0.06
TMEM235A6NFC5 PSMB5-205ENST00000493471 1117 ntTSL 1 (best) BASIC15.44■□□□□ 0.06
TMEM235A6NFC5 NDUFA13-203ENST00000503283 825 ntTSL 2 BASIC15.44■□□□□ 0.06
TMEM235A6NFC5 AC130371.2-201ENST00000619443 611 ntBASIC15.44■□□□□ 0.06
TMEM235A6NFC5 CABP2-204ENST00000636477 941 ntTSL 5 BASIC15.44■□□□□ 0.06
TMEM235A6NFC5 ARHGAP26-202ENST00000378004 9200 ntAPPRIS ALT1 TSL 1 (best) BASIC15.44■□□□□ 0.06
TMEM235A6NFC5 DNM1-216ENST00000634267 2909 ntTSL 5 BASIC15.44■□□□□ 0.06
TMEM235A6NFC5 AC027796.3-201ENST00000572919 4753 ntAPPRIS P1 TSL 5 BASIC15.44■□□□□ 0.06
TMEM235A6NFC5 TBC1D2B-201ENST00000300584 6067 ntAPPRIS ALT2 TSL 5 BASIC15.44■□□□□ 0.06
TMEM235A6NFC5 FAM174B-201ENST00000327355 2792 ntAPPRIS P2 TSL 1 (best) BASIC15.44■□□□□ 0.06
TMEM235A6NFC5 PHF20L1-203ENST00000337920 2311 ntTSL 1 (best) BASIC15.44■□□□□ 0.06
Retrieved 100 of 98,524 protein–RNA pairs in 32.4 ms