Protein–RNA interactions for Protein: A0A0B4J262

TRAV8-6, T-cell receptor alpha variable 8-6 (Fragment), humanhuman

Predictions only

Length 113 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRAV8-6A0A0B4J262 C1orf159-204ENST00000379339 2429 ntAPPRIS ALT2 TSL 2 BASIC13.37□□□□□ -0.27
TRAV8-6A0A0B4J262 COQ10B-203ENST00000409398 879 ntTSL 3 BASIC13.37□□□□□ -0.27
TRAV8-6A0A0B4J262 SEMA4B-202ENST00000411539 3807 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
TRAV8-6A0A0B4J262 F2R-202ENST00000505600 442 ntTSL 2 BASIC13.37□□□□□ -0.27
TRAV8-6A0A0B4J262 AC091564.2-201ENST00000527191 399 ntTSL 3 BASIC13.37□□□□□ -0.27
TRAV8-6A0A0B4J262 AC009090.2-201ENST00000565829 472 ntTSL 3 BASIC13.37□□□□□ -0.27
TRAV8-6A0A0B4J262 AC124016.1-201ENST00000609552 612 ntBASIC13.37□□□□□ -0.27
TRAV8-6A0A0B4J262 LZTS1-201ENST00000265801 5459 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
TRAV8-6A0A0B4J262 ANKRD13D-201ENST00000308440 2219 ntTSL 2 BASIC13.37□□□□□ -0.27
TRAV8-6A0A0B4J262 ANGPTL4-201ENST00000301455 1879 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
TRAV8-6A0A0B4J262 GNAS-203ENST00000306120 1878 ntBASIC13.37□□□□□ -0.27
TRAV8-6A0A0B4J262 PSTPIP1-203ENST00000558012 1896 ntAPPRIS P2 TSL 1 (best) BASIC13.37□□□□□ -0.27
TRAV8-6A0A0B4J262 MLST8-232ENST00000569417 1870 ntAPPRIS P3 TSL 1 (best) BASIC13.37□□□□□ -0.27
TRAV8-6A0A0B4J262 ACTL6B-201ENST00000160382 1537 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
TRAV8-6A0A0B4J262 TCP11-228ENST00000611141 2130 ntAPPRIS ALT2 TSL 1 (best) BASIC13.37□□□□□ -0.27
TRAV8-6A0A0B4J262 NPHP3-201ENST00000337331 4362 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
TRAV8-6A0A0B4J262 SLC30A2-202ENST00000374278 3097 ntTSL 1 (best) BASIC13.37□□□□□ -0.27
TRAV8-6A0A0B4J262 SERPINA4-201ENST00000298841 1784 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
TRAV8-6A0A0B4J262 RUNX1-203ENST00000358356 2720 ntTSL 1 (best) BASIC13.37□□□□□ -0.27
TRAV8-6A0A0B4J262 AL121758.1-201ENST00000488788 2714 ntAPPRIS P1 TSL 2 BASIC13.37□□□□□ -0.27
TRAV8-6A0A0B4J262 CYP2W1-202ENST00000340150 2361 ntTSL 2 BASIC13.37□□□□□ -0.27
TRAV8-6A0A0B4J262 TPCN1-201ENST00000335509 5274 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
TRAV8-6A0A0B4J262 SERF2-203ENST00000381359 1931 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
TRAV8-6A0A0B4J262 MGARP-201ENST00000398955 1339 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
TRAV8-6A0A0B4J262 KHDRBS1-202ENST00000327300 2757 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
TRAV8-6A0A0B4J262 PTTG1IP-203ENST00000397887 2413 ntTSL 4 BASIC13.37□□□□□ -0.27
TRAV8-6A0A0B4J262 ST14-201ENST00000278742 3539 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
TRAV8-6A0A0B4J262 ZNF274-202ENST00000345813 2678 ntAPPRIS ALT2 TSL 1 (best) BASIC13.36□□□□□ -0.27
TRAV8-6A0A0B4J262 STBD1-201ENST00000237642 3420 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
TRAV8-6A0A0B4J262 BMI1-201ENST00000376663 3428 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
TRAV8-6A0A0B4J262 MC1R-204ENST00000639847 2567 ntAPPRIS P1 TSL 5 BASIC13.36□□□□□ -0.27
TRAV8-6A0A0B4J262 BCS1L-201ENST00000359273 1454 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
TRAV8-6A0A0B4J262 GMPPA-213ENST00000622191 1473 ntTSL 5 BASIC13.36□□□□□ -0.27
TRAV8-6A0A0B4J262 AZU1-202ENST00000592205 1713 ntTSL 2 BASIC13.36□□□□□ -0.27
TRAV8-6A0A0B4J262 COL17A1-202ENST00000369733 5488 ntAPPRIS ALT2 TSL 5 BASIC13.36□□□□□ -0.27
TRAV8-6A0A0B4J262 PLA2G7-201ENST00000274793 1882 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
TRAV8-6A0A0B4J262 REL-202ENST00000394479 2398 ntAPPRIS ALT2 TSL 1 (best) BASIC13.36□□□□□ -0.27
TRAV8-6A0A0B4J262 KRT16P6-201ENST00000417510 1873 ntTSL 5 BASIC13.36□□□□□ -0.27
TRAV8-6A0A0B4J262 PBX1-215ENST00000559240 2866 ntTSL 5 BASIC13.36□□□□□ -0.27
TRAV8-6A0A0B4J262 EPHA8-201ENST00000166244 4943 ntAPPRIS P1 TSL 2 BASIC13.36□□□□□ -0.27
TRAV8-6A0A0B4J262 SQOR-201ENST00000260324 2003 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
TRAV8-6A0A0B4J262 SLC39A5-201ENST00000266980 2031 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
TRAV8-6A0A0B4J262 GCOM1-201ENST00000380568 1516 ntAPPRIS ALT2 TSL 2 BASIC13.36□□□□□ -0.27
TRAV8-6A0A0B4J262 HSPB2-C11orf52-202ENST00000534100 1521 ntAPPRIS ALT2 TSL 2 BASIC13.36□□□□□ -0.27
TRAV8-6A0A0B4J262 GRIN2C-202ENST00000347612 2929 ntAPPRIS ALT2 TSL 1 (best) BASIC13.36□□□□□ -0.27
TRAV8-6A0A0B4J262 FBXO28-201ENST00000366862 5451 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
TRAV8-6A0A0B4J262 LRRN4-201ENST00000378858 2692 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
TRAV8-6A0A0B4J262 SPATA2L-202ENST00000335360 1001 ntTSL 1 (best) BASIC13.36□□□□□ -0.27
TRAV8-6A0A0B4J262 AKR1A1-201ENST00000351829 1166 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
TRAV8-6A0A0B4J262 AL353807.1-201ENST00000427475 662 ntBASIC13.36□□□□□ -0.27
TRAV8-6A0A0B4J262 NDUFS6-202ENST00000469176 550 ntTSL 2 BASIC13.36□□□□□ -0.27
TRAV8-6A0A0B4J262 TNFRSF18-204ENST00000486728 727 ntAPPRIS ALT2 TSL 1 (best) BASIC13.36□□□□□ -0.27
TRAV8-6A0A0B4J262 SBF2-AS1-202ENST00000499953 854 ntTSL 5 BASIC13.36□□□□□ -0.27
TRAV8-6A0A0B4J262 CXXC5-AS1-201ENST00000514287 577 ntTSL 4 BASIC13.36□□□□□ -0.27
TRAV8-6A0A0B4J262 RPPH1-201ENST00000516869 333 ntBASIC13.36□□□□□ -0.27
TRAV8-6A0A0B4J262 RNF121-214ENST00000533380 870 ntTSL 3 BASIC13.36□□□□□ -0.27
TRAV8-6A0A0B4J262 MIXL1-202ENST00000542034 839 ntTSL 1 (best) BASIC13.36□□□□□ -0.27
TRAV8-6A0A0B4J262 AC009052.1-201ENST00000567090 298 ntTSL 3 BASIC13.36□□□□□ -0.27
TRAV8-6A0A0B4J262 SUMO2-203ENST00000578238 490 ntTSL 2 BASIC13.36□□□□□ -0.27
TRAV8-6A0A0B4J262 FBXO17-202ENST00000595329 1299 ntAPPRIS P1 TSL 2 BASIC13.36□□□□□ -0.27
TRAV8-6A0A0B4J262 AC020922.2-201ENST00000596786 359 ntTSL 4 BASIC13.36□□□□□ -0.27
TRAV8-6A0A0B4J262 BX649632.1-201ENST00000610187 819 ntTSL 3 BASIC13.36□□□□□ -0.27
TRAV8-6A0A0B4J262 KRTAP5-11-203ENST00000617152 558 ntAPPRIS ALT2 TSL 5 BASIC13.36□□□□□ -0.27
TRAV8-6A0A0B4J262 FP475955.1-201ENST00000624937 553 ntTSL 4 BASIC13.36□□□□□ -0.27
TRAV8-6A0A0B4J262 TARDBP-228ENST00000629725 1031 ntTSL 5 BASIC13.36□□□□□ -0.27
TRAV8-6A0A0B4J262 MIEF2-204ENST00000395706 2441 ntTSL 1 (best) BASIC13.36□□□□□ -0.27
TRAV8-6A0A0B4J262 MPPE1-211ENST00000588072 4236 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
TRAV8-6A0A0B4J262 OGFOD2-211ENST00000538628 1696 ntTSL 1 (best) BASIC13.36□□□□□ -0.27
TRAV8-6A0A0B4J262 PMS1-212ENST00000432292 3234 ntTSL 2 BASIC13.36□□□□□ -0.27
TRAV8-6A0A0B4J262 TLE2-217ENST00000590536 2344 ntAPPRIS ALT2 TSL 1 (best) BASIC13.36□□□□□ -0.27
TRAV8-6A0A0B4J262 ZSCAN10-207ENST00000575108 2247 ntTSL 2 BASIC13.36□□□□□ -0.27
TRAV8-6A0A0B4J262 PHF20L1-201ENST00000220847 3297 ntTSL 5 BASIC13.36□□□□□ -0.27
TRAV8-6A0A0B4J262 ZNF133-206ENST00000402618 2622 ntTSL 2 BASIC13.36□□□□□ -0.27
TRAV8-6A0A0B4J262 WDR41-208ENST00000507029 1553 ntTSL 2 BASIC13.36□□□□□ -0.27
TRAV8-6A0A0B4J262 ZAR1L-202ENST00000533490 1564 ntAPPRIS P1 TSL 5 BASIC13.36□□□□□ -0.27
TRAV8-6A0A0B4J262 SLC27A5-207ENST00000601355 1987 ntAPPRIS ALT2 TSL 2 BASIC13.36□□□□□ -0.27
TRAV8-6A0A0B4J262 PIAS3-201ENST00000369298 2761 ntTSL 5 BASIC13.36□□□□□ -0.27
TRAV8-6A0A0B4J262 AP2A2-201ENST00000332231 4656 ntAPPRIS ALT1 TSL 1 (best) BASIC13.36□□□□□ -0.27
TRAV8-6A0A0B4J262 TNIP1-211ENST00000521591 2274 ntAPPRIS P3 TSL 1 (best) BASIC13.36□□□□□ -0.27
TRAV8-6A0A0B4J262 STK24-203ENST00000397517 4578 ntTSL 2 BASIC13.35□□□□□ -0.27
TRAV8-6A0A0B4J262 ANKRD29-208ENST00000592179 3361 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
TRAV8-6A0A0B4J262 LGALS9C-212ENST00000583322 1602 ntAPPRIS ALT1 TSL 5 BASIC13.35□□□□□ -0.27
TRAV8-6A0A0B4J262 ITPKB-201ENST00000272117 5822 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
TRAV8-6A0A0B4J262 WASHC2C-204ENST00000374362 4623 ntAPPRIS P3 TSL 1 (best) BASIC13.35□□□□□ -0.27
TRAV8-6A0A0B4J262 BPHL-203ENST00000380379 1928 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
TRAV8-6A0A0B4J262 HNRNPLL-212ENST00000608859 3035 ntTSL 5 BASIC13.35□□□□□ -0.27
TRAV8-6A0A0B4J262 HS3ST3B1-201ENST00000360954 5367 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
TRAV8-6A0A0B4J262 MCOLN1-201ENST00000264079 2082 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
TRAV8-6A0A0B4J262 KIRREL1-202ENST00000360089 3304 ntTSL 1 (best) BASIC13.35□□□□□ -0.27
TRAV8-6A0A0B4J262 PTPRN2-205ENST00000409483 4711 ntAPPRIS ALT2 TSL 2 BASIC13.35□□□□□ -0.27
TRAV8-6A0A0B4J262 DUSP15-209ENST00000486996 1651 ntTSL 2 BASIC13.35□□□□□ -0.27
TRAV8-6A0A0B4J262 ISYNA1-206ENST00000578963 1691 ntTSL 1 (best) BASIC13.35□□□□□ -0.27
TRAV8-6A0A0B4J262 NOX4-201ENST00000263317 2388 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
TRAV8-6A0A0B4J262 PLEKHA8-205ENST00000449726 7835 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
TRAV8-6A0A0B4J262 ZIC5-201ENST00000267294 4639 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
TRAV8-6A0A0B4J262 FER1L4-211ENST00000616283 1818 ntTSL 1 (best) BASIC13.35□□□□□ -0.27
TRAV8-6A0A0B4J262 CYP2U1-201ENST00000332884 4944 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
TRAV8-6A0A0B4J262 HIP1R-201ENST00000253083 4539 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
TRAV8-6A0A0B4J262 RPP25L-201ENST00000297613 1092 ntAPPRIS P1 TSL 2 BASIC13.35□□□□□ -0.27
TRAV8-6A0A0B4J262 LGALS7B-201ENST00000314980 483 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
Retrieved 100 of 98,524 protein–RNA pairs in 50.6 ms