Protein–RNA interactions for Protein: A0A075B657

Trdv1, T cell receptor delta variable 1 (Fragment), mousemouse

Predictions only

Length 112 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trdv1A0A075B657 Kcnf1-201ENSMUST00000170580 4789 ntAPPRIS P1 BASIC11.56□□□□□ -0.56
Trdv1A0A075B657 Zhx3-203ENSMUST00000109460 4480 ntAPPRIS P1 TSL 1 (best) BASIC11.56□□□□□ -0.56
Trdv1A0A075B657 Patz1-201ENSMUST00000057089 3118 ntTSL 1 (best) BASIC11.56□□□□□ -0.56
Trdv1A0A075B657 Kpnb1-201ENSMUST00000001479 5894 ntAPPRIS P1 TSL 1 (best) BASIC11.56□□□□□ -0.56
Trdv1A0A075B657 Vwa5b2-203ENSMUST00000100074 2512 ntAPPRIS P3 TSL 1 (best) BASIC11.56□□□□□ -0.56
Trdv1A0A075B657 Fbxo27-201ENSMUST00000039998 1946 ntAPPRIS P3 TSL 1 (best) BASIC11.56□□□□□ -0.56
Trdv1A0A075B657 Tpm1-209ENSMUST00000113690 2890 ntTSL 3 BASIC11.56□□□□□ -0.56
Trdv1A0A075B657 Gm10518-201ENSMUST00000097454 1301 ntAPPRIS P1 BASIC11.56□□□□□ -0.56
Trdv1A0A075B657 Impdh1-207ENSMUST00000162099 2580 ntAPPRIS P1 TSL 1 (best) BASIC11.56□□□□□ -0.56
Trdv1A0A075B657 Otop3-201ENSMUST00000019006 2422 ntAPPRIS P3 TSL 2 BASIC11.56□□□□□ -0.56
Trdv1A0A075B657 Nfkbie-201ENSMUST00000024742 2422 ntAPPRIS P1 TSL 1 (best) BASIC11.56□□□□□ -0.56
Trdv1A0A075B657 Cnksr2-202ENSMUST00000112513 4471 ntTSL 5 BASIC11.56□□□□□ -0.56
Trdv1A0A075B657 Apc-202ENSMUST00000079362 8867 ntAPPRIS P2 TSL 1 (best) BASIC11.56□□□□□ -0.56
Trdv1A0A075B657 Spag1-202ENSMUST00000171205 3219 ntAPPRIS P1 TSL 1 (best) BASIC11.56□□□□□ -0.56
Trdv1A0A075B657 Dnajc27-202ENSMUST00000049584 2934 ntAPPRIS P1 TSL 2 BASIC11.56□□□□□ -0.56
Trdv1A0A075B657 Tubg1-201ENSMUST00000043680 1802 ntAPPRIS P1 TSL 1 (best) BASIC11.56□□□□□ -0.56
Trdv1A0A075B657 Slc25a2-201ENSMUST00000058635 1369 ntAPPRIS P1 BASIC11.55□□□□□ -0.56
Trdv1A0A075B657 Espn-220ENSMUST00000207676 4618 ntAPPRIS ALT2 TSL 5 BASIC11.55□□□□□ -0.56
Trdv1A0A075B657 Bst1-201ENSMUST00000101237 2856 ntAPPRIS P1 TSL 1 (best) BASIC11.55□□□□□ -0.56
Trdv1A0A075B657 Hsd3b7-202ENSMUST00000106271 1713 ntTSL 5 BASIC11.55□□□□□ -0.56
Trdv1A0A075B657 Tgfb1i1-207ENSMUST00000167965 1746 ntAPPRIS P2 TSL 1 (best) BASIC11.55□□□□□ -0.56
Trdv1A0A075B657 Gm5922-201ENSMUST00000214963 1723 ntTSL 1 (best) BASIC11.55□□□□□ -0.56
Trdv1A0A075B657 Mier2-201ENSMUST00000062855 2562 ntAPPRIS P3 TSL 1 (best) BASIC11.55□□□□□ -0.56
Trdv1A0A075B657 Sf3a1-201ENSMUST00000002198 4920 ntAPPRIS P1 TSL 1 (best) BASIC11.55□□□□□ -0.56
Trdv1A0A075B657 Srrm3-204ENSMUST00000144211 3932 ntAPPRIS P1 TSL 1 (best) BASIC11.55□□□□□ -0.56
Trdv1A0A075B657 Cct7-201ENSMUST00000032078 2441 ntAPPRIS P1 TSL 1 (best) BASIC11.55□□□□□ -0.56
Trdv1A0A075B657 Foxj3-201ENSMUST00000044564 4789 ntAPPRIS P3 TSL 1 (best) BASIC11.55□□□□□ -0.56
Trdv1A0A075B657 Pigv-201ENSMUST00000062118 3979 ntAPPRIS P1 TSL 1 (best) BASIC11.55□□□□□ -0.56
Trdv1A0A075B657 Syt3-201ENSMUST00000118831 2627 ntAPPRIS P1 TSL 5 BASIC11.55□□□□□ -0.56
Trdv1A0A075B657 Col8a2-201ENSMUST00000070132 4332 ntAPPRIS P1 TSL 1 (best) BASIC11.55□□□□□ -0.56
Trdv1A0A075B657 Arrdc4-202ENSMUST00000118110 1129 ntAPPRIS ALT2 TSL 1 (best) BASIC11.55□□□□□ -0.56
Trdv1A0A075B657 Gm15565-201ENSMUST00000118890 427 ntBASIC11.55□□□□□ -0.56
Trdv1A0A075B657 Gm11767-201ENSMUST00000129379 493 ntTSL 1 (best) BASIC11.55□□□□□ -0.56
Trdv1A0A075B657 AC153794.1-201ENSMUST00000169148 126 ntBASIC11.55□□□□□ -0.56
Trdv1A0A075B657 Sbsn-202ENSMUST00000182227 432 ntAPPRIS ALT2 TSL 5 BASIC11.55□□□□□ -0.56
Trdv1A0A075B657 Sbsn-203ENSMUST00000182229 732 ntAPPRIS ALT2 TSL 1 (best) BASIC11.55□□□□□ -0.56
Trdv1A0A075B657 Pagr1a-203ENSMUST00000206416 558 ntTSL 3 BASIC11.55□□□□□ -0.56
Trdv1A0A075B657 Flt3l-206ENSMUST00000210197 834 ntAPPRIS ALT2 TSL 5 BASIC11.55□□□□□ -0.56
Trdv1A0A075B657 AC117588.1-201ENSMUST00000228510 999 ntBASIC11.55□□□□□ -0.56
Trdv1A0A075B657 Sec11c-201ENSMUST00000025394 807 ntAPPRIS P1 TSL 1 (best) BASIC11.55□□□□□ -0.56
Trdv1A0A075B657 Spsb2-202ENSMUST00000052727 1219 ntAPPRIS P1 TSL 3 BASIC11.55□□□□□ -0.56
Trdv1A0A075B657 Prr29-201ENSMUST00000009354 1112 ntTSL 1 (best) BASIC11.55□□□□□ -0.56
Trdv1A0A075B657 Tmpo-202ENSMUST00000072239 3533 ntTSL 1 (best) BASIC11.55□□□□□ -0.56
Trdv1A0A075B657 Gnb2-203ENSMUST00000111023 1471 ntTSL 5 BASIC11.55□□□□□ -0.56
Trdv1A0A075B657 Nap1l1-201ENSMUST00000065917 1486 ntAPPRIS P1 TSL 1 (best) BASIC11.55□□□□□ -0.56
Trdv1A0A075B657 Hps5-201ENSMUST00000014562 4953 ntAPPRIS P3 TSL 1 (best) BASIC11.55□□□□□ -0.56
Trdv1A0A075B657 Ilvbl-209ENSMUST00000218885 2233 ntAPPRIS P1 TSL 1 (best) BASIC11.55□□□□□ -0.56
Trdv1A0A075B657 Pias2-201ENSMUST00000114776 2089 ntAPPRIS ALT2 TSL 1 (best) BASIC11.55□□□□□ -0.56
Trdv1A0A075B657 Grik4-202ENSMUST00000114865 5887 ntAPPRIS P1 TSL 1 (best) BASIC11.55□□□□□ -0.56
Trdv1A0A075B657 Lrp11-201ENSMUST00000019931 3386 ntAPPRIS P2 TSL 1 (best) BASIC11.54□□□□□ -0.56
Trdv1A0A075B657 Coasy-201ENSMUST00000001806 2138 ntAPPRIS P1 TSL 1 (best) BASIC11.54□□□□□ -0.56
Trdv1A0A075B657 Nt5e-201ENSMUST00000034992 3995 ntAPPRIS P1 TSL 1 (best) BASIC11.54□□□□□ -0.56
Trdv1A0A075B657 Ski-202ENSMUST00000084103 5309 ntTSL 5 BASIC11.54□□□□□ -0.56
Trdv1A0A075B657 Dnmt3b-202ENSMUST00000072997 4208 ntAPPRIS P4 TSL 1 (best) BASIC11.54□□□□□ -0.56
Trdv1A0A075B657 Gm8242-201ENSMUST00000193029 1420 ntBASIC11.54□□□□□ -0.56
Trdv1A0A075B657 Sema3b-204ENSMUST00000102531 2958 ntAPPRIS P1 TSL 1 (best) BASIC11.54□□□□□ -0.56
Trdv1A0A075B657 Flt4-201ENSMUST00000020617 6255 ntAPPRIS P1 TSL 1 (best) BASIC11.54□□□□□ -0.56
Trdv1A0A075B657 Nhs-202ENSMUST00000087085 8805 ntAPPRIS ALT2 TSL 1 (best) BASIC11.54□□□□□ -0.56
Trdv1A0A075B657 Sptlc1-201ENSMUST00000021920 2606 ntAPPRIS P1 TSL 1 (best) BASIC11.54□□□□□ -0.56
Trdv1A0A075B657 Kif7-203ENSMUST00000183846 4577 ntAPPRIS ALT2 TSL 5 BASIC11.54□□□□□ -0.56
Trdv1A0A075B657 Atp2a3-201ENSMUST00000021142 4593 ntAPPRIS P3 TSL 1 (best) BASIC11.54□□□□□ -0.56
Trdv1A0A075B657 Hist1h2bf-201ENSMUST00000105106 461 ntAPPRIS P1 BASIC11.54□□□□□ -0.56
Trdv1A0A075B657 Prkcz-203ENSMUST00000105624 694 ntTSL 1 (best) BASIC11.54□□□□□ -0.56
Trdv1A0A075B657 Gm8344-201ENSMUST00000119813 856 ntBASIC11.54□□□□□ -0.56
Trdv1A0A075B657 2210408F21Rik-208ENSMUST00000144612 450 ntTSL 3 BASIC11.54□□□□□ -0.56
Trdv1A0A075B657 Tmem208-201ENSMUST00000015000 785 ntAPPRIS P1 TSL 1 (best) BASIC11.54□□□□□ -0.56
Trdv1A0A075B657 Msh3-205ENSMUST00000187424 666 ntTSL 2 BASIC11.54□□□□□ -0.56
Trdv1A0A075B657 AL669916.2-201ENSMUST00000213219 358 ntTSL 2 BASIC11.54□□□□□ -0.56
Trdv1A0A075B657 Tmem242-201ENSMUST00000005053 948 ntAPPRIS P1 TSL 1 (best) BASIC11.54□□□□□ -0.56
Trdv1A0A075B657 Mtnr1b-201ENSMUST00000057920 1095 ntAPPRIS P1 TSL 1 (best) BASIC11.54□□□□□ -0.56
Trdv1A0A075B657 Elfn2-201ENSMUST00000088592 4846 ntAPPRIS P1 TSL 1 (best) BASIC11.54□□□□□ -0.56
Trdv1A0A075B657 Miip-202ENSMUST00000119975 1879 ntAPPRIS ALT2 TSL 1 (best) BASIC11.54□□□□□ -0.56
Trdv1A0A075B657 Tpr-203ENSMUST00000124973 7430 ntAPPRIS P2 TSL 1 (best) BASIC11.54□□□□□ -0.56
Trdv1A0A075B657 Mpped1-201ENSMUST00000046168 3265 ntAPPRIS P1 TSL 1 (best) BASIC11.54□□□□□ -0.56
Trdv1A0A075B657 Ptpn6-210ENSMUST00000174265 1743 ntTSL 5 BASIC11.54□□□□□ -0.56
Trdv1A0A075B657 Ssu2-201ENSMUST00000060847 1321 ntAPPRIS P1 TSL 1 (best) BASIC11.54□□□□□ -0.56
Trdv1A0A075B657 Smtnl2-202ENSMUST00000108500 3572 ntAPPRIS ALT2 TSL 1 (best) BASIC11.54□□□□□ -0.56
Trdv1A0A075B657 Tsn-201ENSMUST00000027623 7063 ntAPPRIS P1 TSL 1 (best) BASIC11.54□□□□□ -0.56
Trdv1A0A075B657 Gpt2-201ENSMUST00000034136 3639 ntAPPRIS P1 TSL 1 (best) BASIC11.54□□□□□ -0.56
Trdv1A0A075B657 Chst8-204ENSMUST00000205259 1980 ntAPPRIS P1 TSL 5 BASIC11.54□□□□□ -0.56
Trdv1A0A075B657 Krt25-201ENSMUST00000038004 1989 ntAPPRIS P1 TSL 1 (best) BASIC11.54□□□□□ -0.56
Trdv1A0A075B657 Slc24a3-201ENSMUST00000081121 1788 ntAPPRIS P2 TSL 5 BASIC11.54□□□□□ -0.56
Trdv1A0A075B657 Mocs1-201ENSMUST00000024797 2646 ntTSL 5 BASIC11.54□□□□□ -0.56
Trdv1A0A075B657 Ss18-203ENSMUST00000092041 2997 ntAPPRIS ALT1 TSL 1 (best) BASIC11.53□□□□□ -0.56
Trdv1A0A075B657 Trim11-203ENSMUST00000108810 2301 ntTSL 1 (best) BASIC11.53□□□□□ -0.56
Trdv1A0A075B657 Ralgds-203ENSMUST00000113893 3683 ntAPPRIS ALT2 TSL 1 (best) BASIC11.53□□□□□ -0.56
Trdv1A0A075B657 Gabra4-201ENSMUST00000031121 4108 ntAPPRIS P2 TSL 1 (best) BASIC11.53□□□□□ -0.56
Trdv1A0A075B657 Ralgapb-203ENSMUST00000109486 8383 ntAPPRIS P2 TSL 1 (best) BASIC11.53□□□□□ -0.56
Trdv1A0A075B657 Klf15-202ENSMUST00000113530 2374 ntAPPRIS P1 TSL 5 BASIC11.53□□□□□ -0.56
Trdv1A0A075B657 Agpat1-208ENSMUST00000174595 1911 ntAPPRIS P1 TSL 5 BASIC11.53□□□□□ -0.56
Trdv1A0A075B657 Ylpm1-207ENSMUST00000168977 4893 ntAPPRIS ALT2 TSL 5 BASIC11.53□□□□□ -0.56
Trdv1A0A075B657 Sox21-201ENSMUST00000170662 3799 ntAPPRIS P1 BASIC11.53□□□□□ -0.56
Trdv1A0A075B657 Myocd-202ENSMUST00000102635 4935 ntAPPRIS P3 TSL 1 (best) BASIC11.53□□□□□ -0.56
Trdv1A0A075B657 Ankrd13b-202ENSMUST00000092892 3336 ntAPPRIS P2 TSL 5 BASIC11.53□□□□□ -0.56
Trdv1A0A075B657 Tchp-201ENSMUST00000094441 2882 ntAPPRIS P1 TSL 1 (best) BASIC11.53□□□□□ -0.56
Trdv1A0A075B657 Mctp1-204ENSMUST00000125209 4715 ntAPPRIS ALT2 TSL 1 (best) BASIC11.53□□□□□ -0.56
Trdv1A0A075B657 Diaph2-207ENSMUST00000167619 8439 ntAPPRIS ALT2 TSL 5 BASIC11.53□□□□□ -0.56
Trdv1A0A075B657 Ap4b1-204ENSMUST00000106824 2412 ntTSL 5 BASIC11.53□□□□□ -0.56
Trdv1A0A075B657 Ndufa5-202ENSMUST00000118558 315 ntTSL 2 BASIC11.53□□□□□ -0.56
Trdv1A0A075B657 BC048679-202ENSMUST00000144156 640 ntAPPRIS ALT2 TSL 1 (best) BASIC11.53□□□□□ -0.56
Retrieved 100 of 76,532 protein–RNA pairs in 22.4 ms