Protein–RNA interactions for Protein: A0A075B653

Trav16, T cell receptor alpha variable 16 (Fragment), mousemouse

Predictions only

Length 116 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav16A0A075B653 Bbx-204ENSMUST00000114477 4516 ntAPPRIS ALT2 TSL 1 (best) BASIC11.74□□□□□ -0.53
Trav16A0A075B653 Aqp11-205ENSMUST00000206389 3737 ntAPPRIS P1 TSL 1 (best) BASIC11.74□□□□□ -0.53
Trav16A0A075B653 Ldb3-208ENSMUST00000228044 1883 ntAPPRIS ALT2 BASIC11.74□□□□□ -0.53
Trav16A0A075B653 Zfp36l1-201ENSMUST00000021552 2990 ntAPPRIS P1 TSL 1 (best) BASIC11.74□□□□□ -0.53
Trav16A0A075B653 Mfsd1-201ENSMUST00000029344 3011 ntAPPRIS P1 TSL 1 (best) BASIC11.74□□□□□ -0.53
Trav16A0A075B653 Dhodh-201ENSMUST00000123605 2039 ntAPPRIS P1 TSL 1 (best) BASIC11.74□□□□□ -0.53
Trav16A0A075B653 3110082I17Rik-204ENSMUST00000198474 2030 ntTSL 2 BASIC11.74□□□□□ -0.53
Trav16A0A075B653 Spon2-201ENSMUST00000046186 2045 ntAPPRIS P1 TSL 1 (best) BASIC11.74□□□□□ -0.53
Trav16A0A075B653 Ccdc157-202ENSMUST00000101626 5153 ntAPPRIS P3 TSL 1 (best) BASIC11.74□□□□□ -0.53
Trav16A0A075B653 Gpr146-201ENSMUST00000051293 4157 ntAPPRIS P1 TSL 1 (best) BASIC11.74□□□□□ -0.53
Trav16A0A075B653 Dnm1-205ENSMUST00000113365 3257 ntAPPRIS ALT1 TSL 5 BASIC11.74□□□□□ -0.53
Trav16A0A075B653 Fam53b-203ENSMUST00000097999 5465 ntAPPRIS P1 TSL 1 (best) BASIC11.74□□□□□ -0.53
Trav16A0A075B653 Pld2-202ENSMUST00000108556 3391 ntTSL 1 (best) BASIC11.74□□□□□ -0.53
Trav16A0A075B653 Mfsd6-201ENSMUST00000087701 3493 ntAPPRIS ALT2 TSL 1 (best) BASIC11.74□□□□□ -0.53
Trav16A0A075B653 Csnk1d-201ENSMUST00000018274 3675 ntAPPRIS P4 TSL 1 (best) BASIC11.74□□□□□ -0.53
Trav16A0A075B653 Fasn-201ENSMUST00000055655 10050 ntAPPRIS P2 TSL 1 (best) BASIC11.74□□□□□ -0.53
Trav16A0A075B653 Gm15545-203ENSMUST00000150613 1059 ntTSL 1 (best) BASIC11.74□□□□□ -0.53
Trav16A0A075B653 D330020A13Rik-201ENSMUST00000181956 1069 ntAPPRIS P1 BASIC11.74□□□□□ -0.53
Trav16A0A075B653 Gm27389-201ENSMUST00000183622 195 ntBASIC11.74□□□□□ -0.53
Trav16A0A075B653 Gm42884-202ENSMUST00000202523 423 ntTSL 3 BASIC11.74□□□□□ -0.53
Trav16A0A075B653 Gm45709-201ENSMUST00000213052 1075 ntTSL 5 BASIC11.74□□□□□ -0.53
Trav16A0A075B653 Krtcap3-201ENSMUST00000054829 904 ntAPPRIS P1 TSL 1 (best) BASIC11.74□□□□□ -0.53
Trav16A0A075B653 Mrps12-201ENSMUST00000056078 722 ntAPPRIS P1 TSL 1 (best) BASIC11.74□□□□□ -0.53
Trav16A0A075B653 Rrp15-201ENSMUST00000001339 1321 ntAPPRIS P1 TSL 1 (best) BASIC11.74□□□□□ -0.53
Trav16A0A075B653 Itgb3-201ENSMUST00000021028 5784 ntAPPRIS P1 TSL 1 (best) BASIC11.74□□□□□ -0.53
Trav16A0A075B653 Myef2-206ENSMUST00000142718 2942 ntAPPRIS ALT2 TSL 5 BASIC11.74□□□□□ -0.53
Trav16A0A075B653 Col1a1-201ENSMUST00000001547 5930 ntAPPRIS P1 TSL 1 (best) BASIC11.74□□□□□ -0.53
Trav16A0A075B653 Bcl11b-201ENSMUST00000066060 8111 ntAPPRIS P4 TSL 1 (best) BASIC11.74□□□□□ -0.53
Trav16A0A075B653 Ubqln1-201ENSMUST00000058735 3686 ntAPPRIS ALT2 TSL 1 (best) BASIC11.74□□□□□ -0.53
Trav16A0A075B653 Smo-201ENSMUST00000001812 3779 ntAPPRIS P1 TSL 1 (best) BASIC11.74□□□□□ -0.53
Trav16A0A075B653 Wnk1-203ENSMUST00000088644 11330 ntAPPRIS ALT2 TSL 5 BASIC11.74□□□□□ -0.53
Trav16A0A075B653 Cdx2-201ENSMUST00000031650 2261 ntAPPRIS P1 TSL 1 (best) BASIC11.74□□□□□ -0.53
Trav16A0A075B653 Acbd5-215ENSMUST00000228050 4804 ntAPPRIS ALT2 BASIC11.74□□□□□ -0.53
Trav16A0A075B653 Sumo3-201ENSMUST00000020501 2630 ntAPPRIS P3 TSL 1 (best) BASIC11.73□□□□□ -0.53
Trav16A0A075B653 Cacna1g-203ENSMUST00000103166 8104 ntAPPRIS ALT2 TSL 5 BASIC11.73□□□□□ -0.53
Trav16A0A075B653 2810402E24Rik-201ENSMUST00000190699 3040 ntBASIC11.73□□□□□ -0.53
Trav16A0A075B653 Ripor2-201ENSMUST00000038477 3371 ntAPPRIS ALT2 TSL 1 (best) BASIC11.73□□□□□ -0.53
Trav16A0A075B653 Cpne4-201ENSMUST00000057742 3959 ntAPPRIS P1 TSL 1 (best) BASIC11.73□□□□□ -0.53
Trav16A0A075B653 Ephb1-201ENSMUST00000035129 4667 ntAPPRIS P1 TSL 1 (best) BASIC11.73□□□□□ -0.53
Trav16A0A075B653 Foxj3-201ENSMUST00000044564 4789 ntAPPRIS P3 TSL 1 (best) BASIC11.73□□□□□ -0.53
Trav16A0A075B653 Zfr2-201ENSMUST00000117798 3349 ntAPPRIS P1 TSL 5 BASIC11.73□□□□□ -0.53
Trav16A0A075B653 Rpl18-ps2-201ENSMUST00000118863 567 ntBASIC11.73□□□□□ -0.53
Trav16A0A075B653 Gm13436-201ENSMUST00000120418 567 ntBASIC11.73□□□□□ -0.53
Trav16A0A075B653 Igf2os-203ENSMUST00000141681 4778 ntTSL 1 (best) BASIC11.73□□□□□ -0.53
Trav16A0A075B653 Cadps2-209ENSMUST00000142913 4533 ntAPPRIS ALT2 TSL 5 BASIC11.73□□□□□ -0.53
Trav16A0A075B653 Cr1l-208ENSMUST00000194111 1501 ntAPPRIS ALT2 TSL 1 (best) BASIC11.73□□□□□ -0.53
Trav16A0A075B653 AC127302.2-201ENSMUST00000215212 268 ntBASIC11.73□□□□□ -0.53
Trav16A0A075B653 Alx1-204ENSMUST00000217946 1542 ntTSL 5 BASIC11.73□□□□□ -0.53
Trav16A0A075B653 Ttc32-203ENSMUST00000219488 768 ntTSL 3 BASIC11.73□□□□□ -0.53
Trav16A0A075B653 CT030684.3-201ENSMUST00000227308 2445 ntBASIC11.73□□□□□ -0.53
Trav16A0A075B653 Aste1-201ENSMUST00000035181 2755 ntAPPRIS P3 TSL 1 (best) BASIC11.73□□□□□ -0.53
Trav16A0A075B653 Pbx3-201ENSMUST00000040638 2587 ntAPPRIS P3 TSL 1 (best) BASIC11.73□□□□□ -0.53
Trav16A0A075B653 Ccdc85a-201ENSMUST00000042534 5332 ntAPPRIS ALT2 TSL 1 (best) BASIC11.73□□□□□ -0.53
Trav16A0A075B653 Cyp2a5-201ENSMUST00000005685 2013 ntAPPRIS P1 TSL 1 (best) BASIC11.73□□□□□ -0.53
Trav16A0A075B653 Cep63-201ENSMUST00000093791 2696 ntTSL 1 (best) BASIC11.73□□□□□ -0.53
Trav16A0A075B653 Ren1-201ENSMUST00000094556 1592 ntAPPRIS P1 TSL 1 (best) BASIC11.73□□□□□ -0.53
Trav16A0A075B653 Robo4-205ENSMUST00000214185 4952 ntAPPRIS ALT2 TSL 1 (best) BASIC11.73□□□□□ -0.53
Trav16A0A075B653 Med25-210ENSMUST00000208253 3693 ntAPPRIS P1 TSL 1 (best) BASIC11.73□□□□□ -0.53
Trav16A0A075B653 Ccdc117-201ENSMUST00000020776 3372 ntAPPRIS P1 TSL 1 (best) BASIC11.73□□□□□ -0.53
Trav16A0A075B653 Tmem108-204ENSMUST00000189588 2850 ntAPPRIS P1 TSL 1 (best) BASIC11.73□□□□□ -0.53
Trav16A0A075B653 Taf2-201ENSMUST00000041733 5031 ntAPPRIS P1 TSL 1 (best) BASIC11.72□□□□□ -0.53
Trav16A0A075B653 Usp19-201ENSMUST00000006854 4791 ntAPPRIS P3 TSL 1 (best) BASIC11.72□□□□□ -0.53
Trav16A0A075B653 Pou2f2-209ENSMUST00000175774 7047 ntAPPRIS ALT2 TSL 1 (best) BASIC11.72□□□□□ -0.53
Trav16A0A075B653 Clec2h-201ENSMUST00000032518 2160 ntAPPRIS P1 TSL 1 (best) BASIC11.72□□□□□ -0.53
Trav16A0A075B653 Diaph2-207ENSMUST00000167619 8439 ntAPPRIS ALT2 TSL 5 BASIC11.72□□□□□ -0.53
Trav16A0A075B653 Mtrr-209ENSMUST00000223398 3861 ntAPPRIS P1 TSL 1 (best) BASIC11.72□□□□□ -0.53
Trav16A0A075B653 Slc10a3-202ENSMUST00000073067 1910 ntAPPRIS P2 TSL 1 (best) BASIC11.72□□□□□ -0.53
Trav16A0A075B653 Dnase1l2-201ENSMUST00000088506 1921 ntAPPRIS P1 TSL 1 (best) BASIC11.72□□□□□ -0.53
Trav16A0A075B653 Fnip2-201ENSMUST00000076136 3775 ntAPPRIS P2 TSL 5 BASIC11.72□□□□□ -0.53
Trav16A0A075B653 Col2a1-202ENSMUST00000088355 4862 ntAPPRIS P1 TSL 1 (best) BASIC11.72□□□□□ -0.53
Trav16A0A075B653 Gm5049-201ENSMUST00000195878 1590 ntBASIC11.72□□□□□ -0.53
Trav16A0A075B653 Ppp1r11-201ENSMUST00000040402 1599 ntAPPRIS P1 TSL 1 (best) BASIC11.72□□□□□ -0.53
Trav16A0A075B653 Suv39h1-203ENSMUST00000115638 3116 ntAPPRIS P1 TSL 1 (best) BASIC11.72□□□□□ -0.53
Trav16A0A075B653 Kbtbd7-201ENSMUST00000061222 4526 ntAPPRIS P1 BASIC11.72□□□□□ -0.53
Trav16A0A075B653 Caprin2-201ENSMUST00000072324 2952 ntAPPRIS ALT2 TSL 5 BASIC11.72□□□□□ -0.53
Trav16A0A075B653 Acvr1c-204ENSMUST00000112608 1497 ntAPPRIS ALT2 TSL 5 BASIC11.72□□□□□ -0.53
Trav16A0A075B653 Nomo1-201ENSMUST00000033121 4257 ntAPPRIS P1 TSL 1 (best) BASIC11.72□□□□□ -0.53
Trav16A0A075B653 AI593442-203ENSMUST00000213937 5674 ntAPPRIS P1 TSL 2 BASIC11.72□□□□□ -0.53
Trav16A0A075B653 Prkg1-202ENSMUST00000073581 2841 ntTSL 1 (best) BASIC11.72□□□□□ -0.53
Trav16A0A075B653 Olfr317-203ENSMUST00000216196 2781 ntAPPRIS P1 TSL 5 BASIC11.72□□□□□ -0.53
Trav16A0A075B653 Phactr3-203ENSMUST00000108915 2694 ntTSL 1 (best) BASIC11.72□□□□□ -0.53
Trav16A0A075B653 Phactr3-204ENSMUST00000108916 2656 ntTSL 1 (best) BASIC11.72□□□□□ -0.53
Trav16A0A075B653 Tmed3-201ENSMUST00000058488 1346 ntAPPRIS P1 TSL 1 (best) BASIC11.72□□□□□ -0.53
Trav16A0A075B653 Prkcz-201ENSMUST00000030922 2641 ntAPPRIS P1 TSL 1 (best) BASIC11.72□□□□□ -0.53
Trav16A0A075B653 Adam22-207ENSMUST00000115388 9161 ntAPPRIS ALT2 TSL 5 BASIC11.72□□□□□ -0.53
Trav16A0A075B653 Gm13420-201ENSMUST00000129574 1091 ntAPPRIS P1 TSL 5 BASIC11.72□□□□□ -0.53
Trav16A0A075B653 Arpc4-204ENSMUST00000204802 794 ntTSL 3 BASIC11.72□□□□□ -0.53
Trav16A0A075B653 Gm45894-202ENSMUST00000212728 1097 ntTSL 1 (best) BASIC11.72□□□□□ -0.53
Trav16A0A075B653 Pomc-204ENSMUST00000219543 1043 ntAPPRIS P1 TSL 1 (best) BASIC11.72□□□□□ -0.53
Trav16A0A075B653 Smim15-206ENSMUST00000226042 1092 ntAPPRIS P1 BASIC11.72□□□□□ -0.53
Trav16A0A075B653 Tesc-201ENSMUST00000031304 1031 ntAPPRIS P1 TSL 1 (best) BASIC11.72□□□□□ -0.53
Trav16A0A075B653 Cmtm7-201ENSMUST00000035009 993 ntAPPRIS P1 TSL 1 (best) BASIC11.72□□□□□ -0.53
Trav16A0A075B653 Eloa-201ENSMUST00000030427 4708 ntAPPRIS P1 TSL 1 (best) BASIC11.72□□□□□ -0.53
Trav16A0A075B653 Gtf2ird1-205ENSMUST00000100654 3156 ntTSL 1 (best) BASIC11.72□□□□□ -0.53
Trav16A0A075B653 Papd5-203ENSMUST00000119033 4624 ntAPPRIS P1 TSL 1 (best) BASIC11.72□□□□□ -0.53
Trav16A0A075B653 Ralgds-203ENSMUST00000113893 3683 ntAPPRIS ALT2 TSL 1 (best) BASIC11.72□□□□□ -0.53
Trav16A0A075B653 Ncmap-204ENSMUST00000105859 1801 ntAPPRIS P1 TSL 1 (best) BASIC11.72□□□□□ -0.53
Trav16A0A075B653 Mob4-202ENSMUST00000159311 1816 ntTSL 3 BASIC11.72□□□□□ -0.53
Trav16A0A075B653 Pdpk1-201ENSMUST00000052462 1832 ntAPPRIS ALT2 TSL 1 (best) BASIC11.72□□□□□ -0.53
Trav16A0A075B653 Myo1c-201ENSMUST00000069057 4547 ntTSL 1 (best) BASIC11.72□□□□□ -0.53
Retrieved 100 of 76,532 protein–RNA pairs in 67.5 ms