Protein–RNA interactions for Protein: Q8N196

SIX5, Homeobox protein SIX5, humanhuman

Predictions only

Length 739 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SIX5Q8N196 CLYBL-203ENST00000376355 6771 ntAPPRIS P1 TSL 2 BASIC18.48■□□□□ 0.55
SIX5Q8N196 LHX3-202ENST00000371748 2365 ntTSL 1 (best) BASIC18.48■□□□□ 0.55
SIX5Q8N196 FRRS1L-201ENST00000561981 8197 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
SIX5Q8N196 UNKL-205ENST00000397464 2180 ntTSL 2 BASIC18.48■□□□□ 0.55
SIX5Q8N196 ANKRD65-201ENST00000427211 1976 ntTSL 1 (best) BASIC18.48■□□□□ 0.55
SIX5Q8N196 NARF-204ENST00000390006 1766 ntTSL 2 BASIC18.48■□□□□ 0.55
SIX5Q8N196 ARHGAP9-202ENST00000393797 2912 ntAPPRIS ALT2 TSL 1 (best) BASIC18.48■□□□□ 0.55
SIX5Q8N196 LYPD3-201ENST00000244333 1694 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
SIX5Q8N196 STAC3-201ENST00000332782 1656 ntAPPRIS P1 TSL 2 BASIC18.48■□□□□ 0.55
SIX5Q8N196 SLC12A5-210ENST00000616202 2445 ntTSL 1 (best) BASIC18.48■□□□□ 0.55
SIX5Q8N196 NUP153-202ENST00000537253 6030 ntAPPRIS ALT2 TSL 2 BASIC18.48■□□□□ 0.55
SIX5Q8N196 C19orf70-201ENST00000309324 896 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
SIX5Q8N196 MIR149-201ENST00000384879 89 ntBASIC18.48■□□□□ 0.55
SIX5Q8N196 AL122058.1-202ENST00000426580 252 ntTSL 3 BASIC18.48■□□□□ 0.55
SIX5Q8N196 AL391069.3-201ENST00000455503 618 ntTSL 2 BASIC18.48■□□□□ 0.55
SIX5Q8N196 NDUFB2-208ENST00000471136 499 ntTSL 3 BASIC18.48■□□□□ 0.55
SIX5Q8N196 AC105202.1-202ENST00000522060 834 ntTSL 3 BASIC18.48■□□□□ 0.55
SIX5Q8N196 AC135050.2-203ENST00000529564 725 ntAPPRIS P1 TSL 4 BASIC18.48■□□□□ 0.55
SIX5Q8N196 LDLRAD2-203ENST00000543870 1180 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
SIX5Q8N196 NKAPP1-205ENST00000585790 367 ntBASIC18.48■□□□□ 0.55
SIX5Q8N196 AC010624.2-201ENST00000600998 575 ntTSL 5 BASIC18.48■□□□□ 0.55
SIX5Q8N196 SORBS3-221ENST00000523965 2028 ntTSL 1 (best) BASIC18.48■□□□□ 0.55
SIX5Q8N196 SOCS2-201ENST00000340600 2761 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
SIX5Q8N196 MRPL10-203ENST00000414011 1622 ntTSL 3 BASIC18.48■□□□□ 0.55
SIX5Q8N196 CHST11-205ENST00000549260 5696 ntAPPRIS ALT1 TSL 1 (best) BASIC18.48■□□□□ 0.55
SIX5Q8N196 SIX5-203ENST00000560168 1975 ntTSL 4 BASIC18.48■□□□□ 0.55
SIX5Q8N196 AC099343.3-201ENST00000605834 2503 ntBASIC18.48■□□□□ 0.55
SIX5Q8N196 NAPRT-203ENST00000435154 1877 ntTSL 2 BASIC18.48■□□□□ 0.55
SIX5Q8N196 FIP1L1-207ENST00000507922 1335 ntTSL 1 (best) BASIC18.48■□□□□ 0.55
SIX5Q8N196 GDF7-201ENST00000272224 9749 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
SIX5Q8N196 ZBTB33-202ENST00000557385 2346 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
SIX5Q8N196 SENP5-204ENST00000445299 2491 ntTSL 2 BASIC18.47■□□□□ 0.55
SIX5Q8N196 MUS81-201ENST00000308110 2392 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
SIX5Q8N196 BRICD5-201ENST00000328540 1913 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
SIX5Q8N196 CRLF3-201ENST00000324238 2957 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
SIX5Q8N196 TMEM79-201ENST00000295694 2191 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
SIX5Q8N196 SYBU-201ENST00000276646 2870 ntAPPRIS ALT2 TSL 1 (best) BASIC18.47■□□□□ 0.55
SIX5Q8N196 TLK2-202ENST00000343388 3227 ntAPPRIS ALT1 TSL 1 (best) BASIC18.47■□□□□ 0.55
SIX5Q8N196 FAM129C-208ENST00000599164 2073 ntAPPRIS ALT2 TSL 2 BASIC18.47■□□□□ 0.55
SIX5Q8N196 ENTPD6-202ENST00000360031 2766 ntAPPRIS ALT2 TSL 1 (best) BASIC18.47■□□□□ 0.55
SIX5Q8N196 CGREF1-201ENST00000260595 1177 ntAPPRIS ALT2 TSL 5 BASIC18.47■□□□□ 0.55
SIX5Q8N196 BRCC3-202ENST00000340647 1101 ntAPPRIS P2 TSL 2 BASIC18.47■□□□□ 0.55
SIX5Q8N196 HCCS-202ENST00000380762 1072 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
SIX5Q8N196 AC007952.1-201ENST00000399087 553 ntTSL 1 (best) BASIC18.47■□□□□ 0.55
SIX5Q8N196 AC007952.2-202ENST00000399093 556 ntTSL 1 (best) BASIC18.47■□□□□ 0.55
SIX5Q8N196 AP006288.1-201ENST00000446065 395 ntBASIC18.47■□□□□ 0.55
SIX5Q8N196 AC063976.1-201ENST00000457890 381 ntTSL 2 BASIC18.47■□□□□ 0.55
SIX5Q8N196 ATP6V0D1-203ENST00000540149 1262 ntTSL 2 BASIC18.47■□□□□ 0.55
SIX5Q8N196 AP005019.1-201ENST00000545254 664 ntTSL 3 BASIC18.47■□□□□ 0.55
SIX5Q8N196 AC097376.2-204ENST00000609359 627 ntTSL 2 BASIC18.47■□□□□ 0.55
SIX5Q8N196 AXIN2-208ENST00000611991 1019 ntTSL 5 BASIC18.47■□□□□ 0.55
SIX5Q8N196 AC009154.2-201ENST00000621177 724 ntBASIC18.47■□□□□ 0.55
SIX5Q8N196 AC106017.2-202ENST00000628484 536 ntTSL 1 (best) BASIC18.47■□□□□ 0.55
SIX5Q8N196 RAB34-226ENST00000636772 1180 ntTSL 5 BASIC18.47■□□□□ 0.55
SIX5Q8N196 FAM110A-201ENST00000246100 1619 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
SIX5Q8N196 PARS2-201ENST00000371279 2347 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
SIX5Q8N196 TMEM189-201ENST00000371650 2222 ntAPPRIS ALT1 TSL 1 (best) BASIC18.47■□□□□ 0.55
SIX5Q8N196 SEPT11-209ENST00000510515 1886 ntTSL 2 BASIC18.47■□□□□ 0.55
SIX5Q8N196 KLF14-201ENST00000583337 2827 ntAPPRIS P1 BASIC18.47■□□□□ 0.55
SIX5Q8N196 CORO6-212ENST00000584969 1416 ntAPPRIS ALT1 TSL 5 BASIC18.47■□□□□ 0.55
SIX5Q8N196 GLB1-202ENST00000307377 2018 ntTSL 1 (best) BASIC18.47■□□□□ 0.55
SIX5Q8N196 PHOSPHO1-202ENST00000413580 2173 ntTSL 2 BASIC18.47■□□□□ 0.55
SIX5Q8N196 ACOT7-202ENST00000377842 1813 ntAPPRIS ALT2 TSL 1 (best) BASIC18.46■□□□□ 0.55
SIX5Q8N196 MRGPRG-AS1-201ENST00000420873 1818 ntTSL 2 BASIC18.46■□□□□ 0.55
SIX5Q8N196 VWA8-AS1-201ENST00000611103 2079 ntTSL 2 BASIC18.46■□□□□ 0.55
SIX5Q8N196 YAP1-208ENST00000531439 1490 ntAPPRIS ALT2 TSL 1 (best) BASIC18.46■□□□□ 0.55
SIX5Q8N196 IFNL4-204ENST00000634967 1493 ntAPPRIS ALT2 TSL 1 (best) BASIC18.46■□□□□ 0.55
SIX5Q8N196 PLEKHG2-202ENST00000409797 2205 ntAPPRIS ALT2 TSL 2 BASIC18.46■□□□□ 0.55
SIX5Q8N196 ZNF517-202ENST00000525105 1383 ntTSL 1 (best) BASIC18.46■□□□□ 0.55
SIX5Q8N196 ASL-204ENST00000395331 1538 ntTSL 5 BASIC18.46■□□□□ 0.55
SIX5Q8N196 STARD7-AS1-202ENST00000446816 1527 ntTSL 2 BASIC18.46■□□□□ 0.55
SIX5Q8N196 CYP2D7-208ENST00000614967 1504 ntTSL 5 BASIC18.46■□□□□ 0.55
SIX5Q8N196 CLUH-201ENST00000435359 5224 ntAPPRIS P2 TSL 5 BASIC18.46■□□□□ 0.55
SIX5Q8N196 HIST1H2BL-201ENST00000377401 488 ntAPPRIS P1 BASIC18.46■□□□□ 0.55
SIX5Q8N196 CAMTA1-IT1-201ENST00000427317 365 ntTSL 3 BASIC18.46■□□□□ 0.55
SIX5Q8N196 AC009947.1-201ENST00000444350 727 ntBASIC18.46■□□□□ 0.55
SIX5Q8N196 AC012363.1-201ENST00000455707 575 ntTSL 4 BASIC18.46■□□□□ 0.55
SIX5Q8N196 CDKN2A-209ENST00000498628 926 ntTSL 2 BASIC18.46■□□□□ 0.55
SIX5Q8N196 AC008429.1-203ENST00000518894 548 ntTSL 4 BASIC18.46■□□□□ 0.55
SIX5Q8N196 MSRA-206ENST00000521209 814 ntTSL 3 BASIC18.46■□□□□ 0.55
SIX5Q8N196 HOPX-214ENST00000556614 1138 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
SIX5Q8N196 RPS29-206ENST00000557111 488 ntTSL 2 BASIC18.46■□□□□ 0.55
SIX5Q8N196 CMTM3-205ENST00000562707 714 ntAPPRIS P1 TSL 3 BASIC18.46■□□□□ 0.55
SIX5Q8N196 AL662799.1-201ENST00000630418 496 ntTSL 5 BASIC18.46■□□□□ 0.55
SIX5Q8N196 HEIH-201ENST00000623091 1652 ntBASIC18.46■□□□□ 0.55
SIX5Q8N196 NFKBIE-204ENST00000619360 2327 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
SIX5Q8N196 CRMP1-201ENST00000324989 3146 ntTSL 1 (best) BASIC18.46■□□□□ 0.55
SIX5Q8N196 FLT1-201ENST00000282397 7092 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
SIX5Q8N196 SLC39A5-209ENST00000454355 1968 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
SIX5Q8N196 CHRNB2-205ENST00000637900 2390 ntAPPRIS ALT1 TSL 5 BASIC18.46■□□□□ 0.55
SIX5Q8N196 SULF2-201ENST00000359930 4915 ntAPPRIS P4 TSL 1 (best) BASIC18.46■□□□□ 0.55
SIX5Q8N196 ENDOV-225ENST00000522751 1475 ntTSL 5 BASIC18.46■□□□□ 0.54
SIX5Q8N196 METTL21A-208ENST00000448007 1770 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
SIX5Q8N196 UPP1-201ENST00000331803 1932 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
SIX5Q8N196 MEN1-206ENST00000377321 2614 ntTSL 1 (best) BASIC18.45■□□□□ 0.54
SIX5Q8N196 CYMP-203ENST00000474680 1263 ntBASIC18.45■□□□□ 0.54
SIX5Q8N196 KIAA0930-215ENST00000496226 589 ntTSL 5 BASIC18.45■□□□□ 0.54
SIX5Q8N196 AL133375.1-201ENST00000500590 980 ntTSL 5 BASIC18.45■□□□□ 0.54
SIX5Q8N196 MRNIP-205ENST00000518235 1244 ntAPPRIS ALT2 TSL 2 BASIC18.45■□□□□ 0.54
SIX5Q8N196 KRT18P41-201ENST00000518924 1277 ntBASIC18.45■□□□□ 0.54
Retrieved 100 of 98,524 protein–RNA pairs in 29.9 ms