Protein–RNA interactions for Protein: Q8IY18

SMC5, Structural maintenance of chromosomes protein 5, humanhuman

Predictions only

Length 1,101 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SMC5Q8IY18 WIF1-201ENST00000286574 2238 ntAPPRIS P1 TSL 1 (best) BASIC22.38■■□□□ 1.17
SMC5Q8IY18 EXOC5-201ENST00000340918 2632 ntTSL 2 BASIC22.38■■□□□ 1.17
SMC5Q8IY18 SDC1-203ENST00000403076 1523 ntTSL 1 (best) BASIC22.38■■□□□ 1.17
SMC5Q8IY18 LRRC27-214ENST00000625755 1738 ntAPPRIS ALT2 TSL 1 (best) BASIC22.38■■□□□ 1.17
SMC5Q8IY18 PRRT2-219ENST00000637565 1733 ntTSL 5 BASIC22.38■■□□□ 1.17
SMC5Q8IY18 LMNA-208ENST00000448611 1943 ntTSL 2 BASIC22.38■■□□□ 1.17
SMC5Q8IY18 HES7-201ENST00000317814 678 ntAPPRIS P3 TSL 1 (best) BASIC22.38■■□□□ 1.17
SMC5Q8IY18 COMTD1-201ENST00000372538 976 ntAPPRIS P1 TSL 1 (best) BASIC22.38■■□□□ 1.17
SMC5Q8IY18 MNX1-AS1-201ENST00000480284 1041 ntTSL 1 (best) BASIC22.38■■□□□ 1.17
SMC5Q8IY18 COX11P1-201ENST00000489116 835 ntBASIC22.38■■□□□ 1.17
SMC5Q8IY18 MYD88-211ENST00000495303 976 ntTSL 1 (best) BASIC22.38■■□□□ 1.17
SMC5Q8IY18 FAM104A-205ENST00000581110 512 ntTSL 2 BASIC22.38■■□□□ 1.17
SMC5Q8IY18 UQCR11-201ENST00000585671 753 ntAPPRIS P1 TSL 1 (best) BASIC22.38■■□□□ 1.17
SMC5Q8IY18 NDUFAB1-201ENST00000007516 717 ntAPPRIS P1 TSL 1 (best) BASIC22.38■■□□□ 1.17
SMC5Q8IY18 SLC22A1-203ENST00000457470 1452 ntTSL 5 BASIC22.38■■□□□ 1.17
SMC5Q8IY18 CPT2-208ENST00000636891 2746 ntTSL 5 BASIC22.38■■□□□ 1.17
SMC5Q8IY18 RNF2-201ENST00000367509 1677 ntTSL 2 BASIC22.38■■□□□ 1.17
SMC5Q8IY18 ZBED3-AS1-208ENST00000512001 1668 ntTSL 3 BASIC22.38■■□□□ 1.17
SMC5Q8IY18 FFAR2-201ENST00000246549 2051 ntAPPRIS P1 BASIC22.38■■□□□ 1.17
SMC5Q8IY18 LINC01554-202ENST00000436592 2052 ntTSL 1 (best) BASIC22.38■■□□□ 1.17
SMC5Q8IY18 PDCD7-201ENST00000204549 2851 ntAPPRIS P2 TSL 1 (best) BASIC22.38■■□□□ 1.17
SMC5Q8IY18 LRRC14-201ENST00000292524 5328 ntAPPRIS P1 TSL 1 (best) BASIC22.38■■□□□ 1.17
SMC5Q8IY18 PAX4-204ENST00000463946 1613 ntTSL 1 (best) BASIC22.38■■□□□ 1.17
SMC5Q8IY18 AC013275.1-201ENST00000413602 2019 ntTSL 1 (best) BASIC22.38■■□□□ 1.17
SMC5Q8IY18 TRAPPC2L-201ENST00000301021 2215 ntAPPRIS P1 TSL 1 (best) BASIC22.38■■□□□ 1.17
SMC5Q8IY18 IGLON5-201ENST00000270642 2606 ntAPPRIS P1 TSL 5 BASIC22.38■■□□□ 1.17
SMC5Q8IY18 TAL1-202ENST00000371884 4642 ntAPPRIS P1 TSL 1 (best) BASIC22.38■■□□□ 1.17
SMC5Q8IY18 HARS-201ENST00000307633 1780 ntTSL 2 BASIC22.38■■□□□ 1.17
SMC5Q8IY18 CHRNB4-202ENST00000412074 1355 ntTSL 1 (best) BASIC22.38■■□□□ 1.17
SMC5Q8IY18 AANAT-201ENST00000250615 1913 ntTSL 1 (best) BASIC22.37■■□□□ 1.17
SMC5Q8IY18 APOA5-203ENST00000542499 1929 ntAPPRIS P1 TSL 5 BASIC22.37■■□□□ 1.17
SMC5Q8IY18 AP001922.1-201ENST00000499390 1504 ntTSL 1 (best) BASIC22.37■■□□□ 1.17
SMC5Q8IY18 CEP83-AS1-201ENST00000623122 2482 ntBASIC22.37■■□□□ 1.17
SMC5Q8IY18 AC022898.2-201ENST00000616822 1312 ntBASIC22.37■■□□□ 1.17
SMC5Q8IY18 TBX2-201ENST00000240328 3339 ntAPPRIS P1 TSL 1 (best) BASIC22.37■■□□□ 1.17
SMC5Q8IY18 SERPINB6-208ENST00000616722 2047 ntTSL 2 BASIC22.37■■□□□ 1.17
SMC5Q8IY18 MOGS-205ENST00000452063 2568 ntAPPRIS ALT2 TSL 1 (best) BASIC22.37■■□□□ 1.17
SMC5Q8IY18 TERF1P1-201ENST00000311003 1181 ntBASIC22.37■■□□□ 1.17
SMC5Q8IY18 CD7-201ENST00000312648 1281 ntAPPRIS P2 TSL 1 (best) BASIC22.37■■□□□ 1.17
SMC5Q8IY18 MDK-205ENST00000405308 1166 ntAPPRIS P2 TSL 2 BASIC22.37■■□□□ 1.17
SMC5Q8IY18 AC113347.1-201ENST00000413321 391 ntBASIC22.37■■□□□ 1.17
SMC5Q8IY18 AP005717.1-202ENST00000523563 419 ntTSL 3 BASIC22.37■■□□□ 1.17
SMC5Q8IY18 C17orf62-230ENST00000583617 866 ntTSL 5 BASIC22.37■■□□□ 1.17
SMC5Q8IY18 AC004076.1-201ENST00000596831 664 ntAPPRIS P1 TSL 2 BASIC22.37■■□□□ 1.17
SMC5Q8IY18 C16orf74-203ENST00000602675 744 ntAPPRIS ALT2 TSL 1 (best) BASIC22.37■■□□□ 1.17
SMC5Q8IY18 AL136038.4-201ENST00000603606 1261 ntBASIC22.37■■□□□ 1.17
SMC5Q8IY18 CD24-206ENST00000620405 586 ntAPPRIS ALT2 TSL 2 BASIC22.37■■□□□ 1.17
SMC5Q8IY18 AC011558.1-201ENST00000623459 338 ntBASIC22.37■■□□□ 1.17
SMC5Q8IY18 DLK1-202ENST00000341267 4722 ntAPPRIS P1 TSL 1 (best) BASIC22.37■■□□□ 1.17
SMC5Q8IY18 ZBTB16-201ENST00000335953 2523 ntAPPRIS P1 TSL 1 (best) BASIC22.37■■□□□ 1.17
SMC5Q8IY18 EPS8L2-205ENST00000526198 2289 ntAPPRIS ALT2 TSL 1 (best) BASIC22.37■■□□□ 1.17
SMC5Q8IY18 GRIN3B-201ENST00000234389 3281 ntAPPRIS P1 TSL 1 (best) BASIC22.37■■□□□ 1.17
SMC5Q8IY18 ZNF655-203ENST00000357864 1370 ntTSL 2 BASIC22.37■■□□□ 1.17
SMC5Q8IY18 SEPT9-236ENST00000591088 1691 ntAPPRIS ALT2 TSL 2 BASIC22.36■■□□□ 1.17
SMC5Q8IY18 TBC1D9-201ENST00000442267 5306 ntAPPRIS P1 TSL 1 (best) BASIC22.36■■□□□ 1.17
SMC5Q8IY18 SNX1-208ENST00000559844 1971 ntAPPRIS P1 TSL 1 (best) BASIC22.36■■□□□ 1.17
SMC5Q8IY18 GAB1-201ENST00000262994 2648 ntAPPRIS ALT1 TSL 1 (best) BASIC22.36■■□□□ 1.17
SMC5Q8IY18 KLHL22-201ENST00000328879 2616 ntAPPRIS P1 TSL 1 (best) BASIC22.36■■□□□ 1.17
SMC5Q8IY18 PRPF31-202ENST00000391755 1767 ntTSL 5 BASIC22.36■■□□□ 1.17
SMC5Q8IY18 POU4F3-201ENST00000230732 1182 ntAPPRIS P1 TSL 1 (best) BASIC22.36■■□□□ 1.17
SMC5Q8IY18 STARP1-201ENST00000397973 869 ntBASIC22.36■■□□□ 1.17
SMC5Q8IY18 APBB3-216ENST00000511201 1014 ntTSL 5 BASIC22.36■■□□□ 1.17
SMC5Q8IY18 AL442663.3-201ENST00000554737 1000 ntTSL 3 BASIC22.36■■□□□ 1.17
SMC5Q8IY18 RPARP-AS1-206ENST00000596366 631 ntTSL 3 BASIC22.36■■□□□ 1.17
SMC5Q8IY18 AL031432.5-201ENST00000641059 760 ntBASIC22.36■■□□□ 1.17
SMC5Q8IY18 PYGL-201ENST00000216392 3048 ntAPPRIS P1 TSL 1 (best) BASIC22.36■■□□□ 1.17
SMC5Q8IY18 C6orf203-202ENST00000405204 1420 ntAPPRIS P1 TSL 2 BASIC22.36■■□□□ 1.17
SMC5Q8IY18 CD99P1-204ENST00000435581 2788 ntTSL 2 BASIC22.36■■□□□ 1.17
SMC5Q8IY18 DAP3-214ENST00000471642 1671 ntTSL 5 BASIC22.36■■□□□ 1.17
SMC5Q8IY18 PDE4D-204ENST00000358923 2969 ntTSL 1 (best) BASIC22.35■■□□□ 1.17
SMC5Q8IY18 DOC2A-209ENST00000564979 1630 ntAPPRIS P1 TSL 1 (best) BASIC22.35■■□□□ 1.17
SMC5Q8IY18 AC004832.3-202ENST00000439838 1470 ntAPPRIS P1 TSL 2 BASIC22.35■■□□□ 1.17
SMC5Q8IY18 RABL2A-204ENST00000393167 2179 ntAPPRIS P3 TSL 1 (best) BASIC22.35■■□□□ 1.17
SMC5Q8IY18 NDUFS7-210ENST00000539480 1743 ntTSL 2 BASIC22.35■■□□□ 1.17
SMC5Q8IY18 PIP5K1A-207ENST00000441902 2297 ntTSL 2 BASIC22.35■■□□□ 1.17
SMC5Q8IY18 GPR6-201ENST00000275169 1089 ntAPPRIS P1 BASIC22.35■■□□□ 1.17
SMC5Q8IY18 ANKRD20A18P-201ENST00000359341 492 ntBASIC22.35■■□□□ 1.17
SMC5Q8IY18 LCE4A-202ENST00000368777 672 ntAPPRIS P1 TSL 2 BASIC22.35■■□□□ 1.17
SMC5Q8IY18 GUCA2B-201ENST00000372581 597 ntAPPRIS P1 TSL 1 (best) BASIC22.35■■□□□ 1.17
SMC5Q8IY18 TSPO2-202ENST00000373161 958 ntAPPRIS P1 TSL 1 (best) BASIC22.35■■□□□ 1.17
SMC5Q8IY18 TSPY8-203ENST00000383005 435 ntTSL 5 BASIC22.35■■□□□ 1.17
SMC5Q8IY18 KRT18P65-201ENST00000439811 1286 ntBASIC22.35■■□□□ 1.17
SMC5Q8IY18 AL365295.1-202ENST00000456100 562 ntTSL 4 BASIC22.35■■□□□ 1.17
SMC5Q8IY18 TSPO2-203ENST00000470917 699 ntAPPRIS P1 TSL 1 (best) BASIC22.35■■□□□ 1.17
SMC5Q8IY18 AC026471.3-201ENST00000565137 578 ntTSL 2 BASIC22.35■■□□□ 1.17
SMC5Q8IY18 AC073912.3-201ENST00000624414 853 ntBASIC22.35■■□□□ 1.17
SMC5Q8IY18 AC133561.5-201ENST00000635547 218 ntBASIC22.35■■□□□ 1.17
SMC5Q8IY18 TCIRG1-201ENST00000265686 2677 ntAPPRIS P1 TSL 1 (best) BASIC22.35■■□□□ 1.17
SMC5Q8IY18 RIN1-201ENST00000311320 2693 ntAPPRIS P1 TSL 1 (best) BASIC22.35■■□□□ 1.17
SMC5Q8IY18 ZNF48-206ENST00000622647 2695 ntTSL 4 BASIC22.35■■□□□ 1.17
SMC5Q8IY18 RTKN-203ENST00000305557 2646 ntAPPRIS P3 TSL 5 BASIC22.35■■□□□ 1.17
SMC5Q8IY18 KCTD15-202ENST00000430256 2555 ntAPPRIS P1 TSL 2 BASIC22.35■■□□□ 1.17
SMC5Q8IY18 CENPT-215ENST00000564817 1638 ntAPPRIS ALT2 TSL 5 BASIC22.35■■□□□ 1.17
SMC5Q8IY18 PPP1R16A-202ENST00000435887 2273 ntAPPRIS P1 TSL 1 (best) BASIC22.34■■□□□ 1.17
SMC5Q8IY18 VHL-202ENST00000345392 2696 ntTSL 1 (best) BASIC22.34■■□□□ 1.17
SMC5Q8IY18 GBX2-203ENST00000551105 1307 ntTSL 1 (best) BASIC22.34■■□□□ 1.17
SMC5Q8IY18 MARK2-209ENST00000509502 2862 ntAPPRIS ALT2 TSL 2 BASIC22.34■■□□□ 1.17
SMC5Q8IY18 AC133561.2-201ENST00000380145 1802 ntTSL 2 BASIC22.34■■□□□ 1.17
SMC5Q8IY18 ARNTL-205ENST00000403510 2745 ntTSL 2 BASIC22.34■■□□□ 1.17
SMC5Q8IY18 BDKRB1-201ENST00000216629 1687 ntAPPRIS P1 TSL 1 (best) BASIC22.34■■□□□ 1.17
Retrieved 100 of 98,524 protein–RNA pairs in 33.8 ms