Protein–RNA interactions for Protein: Q5SXM2

SNAPC4, snRNA-activating protein complex subunit 4, humanhuman

Predictions only

Length 1,469 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SNAPC4Q5SXM2 EGR3-204ENST00000522910 1553 ntAPPRIS ALT1 TSL 2 BASIC29.38■■■□□ 2.29
SNAPC4Q5SXM2 DMRT2-204ENST00000382251 2292 ntAPPRIS P1 TSL 5 BASIC29.38■■■□□ 2.29
SNAPC4Q5SXM2 C22orf39-201ENST00000333059 1221 ntAPPRIS P1 TSL 1 (best) BASIC29.38■■■□□ 2.29
SNAPC4Q5SXM2 KANK4-202ENST00000354381 2103 ntTSL 2 BASIC29.38■■■□□ 2.29
SNAPC4Q5SXM2 SLC9A3-AS1-205ENST00000606319 477 ntTSL 3 BASIC29.38■■■□□ 2.29
SNAPC4Q5SXM2 Z92544.3-201ENST00000624747 417 ntBASIC29.38■■■□□ 2.29
SNAPC4Q5SXM2 AL805961.1-202ENST00000641562 540 ntBASIC29.38■■■□□ 2.29
SNAPC4Q5SXM2 ZNF688-201ENST00000223459 2506 ntAPPRIS P1 TSL 1 (best) BASIC29.38■■■□□ 2.29
SNAPC4Q5SXM2 SNAI3-AS1-205ENST00000568633 2096 ntBASIC29.38■■■□□ 2.29
SNAPC4Q5SXM2 TUBA4B-203ENST00000490341 1380 ntAPPRIS P1 TSL 2 BASIC29.38■■■□□ 2.29
SNAPC4Q5SXM2 CHST8-203ENST00000438847 2133 ntAPPRIS P1 TSL 1 (best) BASIC29.38■■■□□ 2.29
SNAPC4Q5SXM2 AC027312.1-201ENST00000523591 1571 ntTSL 5 BASIC29.38■■■□□ 2.29
SNAPC4Q5SXM2 SLC1A5-203ENST00000542575 2882 ntAPPRIS P1 TSL 1 (best) BASIC29.38■■■□□ 2.29
SNAPC4Q5SXM2 ARHGAP22-210ENST00000477708 1951 ntTSL 1 (best) BASIC29.38■■■□□ 2.29
SNAPC4Q5SXM2 SPACA4-201ENST00000321762 972 ntAPPRIS P1 BASIC29.37■■■□□ 2.29
SNAPC4Q5SXM2 ICOSLG-201ENST00000344330 1009 ntAPPRIS ALT2 TSL 1 (best) BASIC29.37■■■□□ 2.29
SNAPC4Q5SXM2 NDUFB2-202ENST00000460088 420 ntTSL 3 BASIC29.37■■■□□ 2.29
SNAPC4Q5SXM2 LINC01336-202ENST00000506086 479 ntTSL 5 BASIC29.37■■■□□ 2.29
SNAPC4Q5SXM2 CYB561-217ENST00000582997 877 ntTSL 5 BASIC29.37■■■□□ 2.29
SNAPC4Q5SXM2 OSM-201ENST00000215781 1854 ntAPPRIS P3 TSL 1 (best) BASIC29.37■■■□□ 2.29
SNAPC4Q5SXM2 SH3BP5-203ENST00000408919 1880 ntTSL 1 (best) BASIC29.37■■■□□ 2.29
SNAPC4Q5SXM2 LINC01123-202ENST00000419296 2436 ntTSL 2 BASIC29.37■■■□□ 2.29
SNAPC4Q5SXM2 TFDP2-202ENST00000467072 1853 ntAPPRIS P3 TSL 1 (best) BASIC29.37■■■□□ 2.29
SNAPC4Q5SXM2 IFRD2-202ENST00000417626 2109 ntTSL 1 (best) BASIC29.37■■■□□ 2.29
SNAPC4Q5SXM2 AMACR-204ENST00000382085 1195 ntTSL 1 (best) BASIC29.36■■■□□ 2.29
SNAPC4Q5SXM2 ACTG1P14-201ENST00000446382 1122 ntBASIC29.36■■■□□ 2.29
SNAPC4Q5SXM2 AZIN1-AS1-212ENST00000520538 476 ntTSL 3 BASIC29.36■■■□□ 2.29
SNAPC4Q5SXM2 AC092902.6-201ENST00000641783 218 ntBASIC29.36■■■□□ 2.29
SNAPC4Q5SXM2 HOXC4-201ENST00000303406 1524 ntAPPRIS P1 TSL 1 (best) BASIC29.36■■■□□ 2.29
SNAPC4Q5SXM2 ZNF397-204ENST00000585800 2046 ntTSL 5 BASIC29.36■■■□□ 2.29
SNAPC4Q5SXM2 FAM20C-201ENST00000313766 2751 ntAPPRIS P1 TSL 1 (best) BASIC29.36■■■□□ 2.29
SNAPC4Q5SXM2 DHRS7-201ENST00000216500 2322 ntAPPRIS P1 TSL 5 BASIC29.36■■■□□ 2.29
SNAPC4Q5SXM2 TYMS-203ENST00000323274 1662 ntAPPRIS P1 TSL 1 (best) BASIC29.36■■■□□ 2.29
SNAPC4Q5SXM2 TMEM191A-208ENST00000450925 1961 ntTSL 2 BASIC29.36■■■□□ 2.29
SNAPC4Q5SXM2 NFKBIB-202ENST00000392079 991 ntTSL 5 BASIC29.36■■■□□ 2.29
SNAPC4Q5SXM2 AL049612.1-201ENST00000427017 694 ntTSL 5 BASIC29.36■■■□□ 2.29
SNAPC4Q5SXM2 ADH5P3-201ENST00000433842 1137 ntBASIC29.36■■■□□ 2.29
SNAPC4Q5SXM2 AL451067.1-201ENST00000453111 394 ntTSL 2 BASIC29.36■■■□□ 2.29
SNAPC4Q5SXM2 AC234772.2-201ENST00000456532 375 ntTSL 3 BASIC29.36■■■□□ 2.29
SNAPC4Q5SXM2 AC023141.5-201ENST00000458585 616 ntBASIC29.36■■■□□ 2.29
SNAPC4Q5SXM2 AC099482.1-201ENST00000563471 481 ntTSL 2 BASIC29.36■■■□□ 2.29
SNAPC4Q5SXM2 TBX18-206ENST00000606784 1230 ntTSL 1 (best) BASIC29.36■■■□□ 2.29
SNAPC4Q5SXM2 RELA-202ENST00000406246 2700 ntAPPRIS P3 TSL 1 (best) BASIC29.35■■■□□ 2.29
SNAPC4Q5SXM2 PTHLH-203ENST00000395872 1318 ntAPPRIS ALT1 TSL 5 BASIC29.35■■■□□ 2.29
SNAPC4Q5SXM2 BCAR1-209ENST00000546196 1340 ntBASIC29.35■■■□□ 2.29
SNAPC4Q5SXM2 AC011944.1-201ENST00000316148 1900 ntTSL 2 BASIC29.35■■■□□ 2.29
SNAPC4Q5SXM2 TRMT6-202ENST00000453074 2239 ntTSL 2 BASIC29.35■■■□□ 2.29
SNAPC4Q5SXM2 MVK-201ENST00000228510 1956 ntAPPRIS P1 TSL 1 (best) BASIC29.35■■■□□ 2.29
SNAPC4Q5SXM2 TM2D3-207ENST00000559107 1353 ntTSL 3 BASIC29.35■■■□□ 2.29
SNAPC4Q5SXM2 KRT3-201ENST00000417996 2319 ntAPPRIS P1 TSL 1 (best) BASIC29.35■■■□□ 2.29
SNAPC4Q5SXM2 FYN-204ENST00000368678 2573 ntAPPRIS ALT1 TSL 5 BASIC29.35■■■□□ 2.29
SNAPC4Q5SXM2 AC242426.3-201ENST00000440377 1571 ntTSL 2 BASIC29.35■■■□□ 2.29
SNAPC4Q5SXM2 FAM66B-202ENST00000606573 2630 ntTSL 1 (best) BASIC29.35■■■□□ 2.29
SNAPC4Q5SXM2 GLYCTK-202ENST00000436784 1982 ntAPPRIS P1 TSL 1 (best) BASIC29.35■■■□□ 2.29
SNAPC4Q5SXM2 AL079301.1-201ENST00000424580 1633 ntTSL 2 BASIC29.35■■■□□ 2.29
SNAPC4Q5SXM2 TMEM88-202ENST00000574668 510 ntTSL 2 BASIC29.35■■■□□ 2.29
SNAPC4Q5SXM2 BRSK2-212ENST00000531197 3163 ntAPPRIS ALT2 TSL 1 (best) BASIC29.35■■■□□ 2.29
SNAPC4Q5SXM2 MALT1-201ENST00000345724 2866 ntAPPRIS ALT2 TSL 1 (best) BASIC29.35■■■□□ 2.29
SNAPC4Q5SXM2 ENGASE-205ENST00000579016 2579 ntAPPRIS P1 TSL 1 (best) BASIC29.34■■■□□ 2.29
SNAPC4Q5SXM2 KIF25-AS1-201ENST00000414364 1420 ntTSL 2 BASIC29.34■■■□□ 2.29
SNAPC4Q5SXM2 SPNS1-203ENST00000334536 2027 ntTSL 1 (best) BASIC29.34■■■□□ 2.29
SNAPC4Q5SXM2 CSNK1D-204ENST00000398519 1580 ntTSL 5 BASIC29.34■■■□□ 2.29
SNAPC4Q5SXM2 STYXL1-208ENST00000451157 1570 ntTSL 1 (best) BASIC29.34■■■□□ 2.29
SNAPC4Q5SXM2 PAX4-204ENST00000463946 1613 ntTSL 1 (best) BASIC29.34■■■□□ 2.29
SNAPC4Q5SXM2 RELB-202ENST00000505236 2219 ntAPPRIS ALT2 TSL 5 BASIC29.34■■■□□ 2.29
SNAPC4Q5SXM2 MRPL16-201ENST00000300151 1182 ntAPPRIS P1 TSL 1 (best) BASIC29.34■■■□□ 2.29
SNAPC4Q5SXM2 FAM221A-202ENST00000409192 888 ntTSL 1 (best) BASIC29.34■■■□□ 2.29
SNAPC4Q5SXM2 AC005034.1-201ENST00000426657 489 ntBASIC29.34■■■□□ 2.29
SNAPC4Q5SXM2 AC106897.1-201ENST00000512874 394 ntTSL 2 BASIC29.34■■■□□ 2.29
SNAPC4Q5SXM2 AC004835.2-201ENST00000603762 682 ntBASIC29.34■■■□□ 2.29
SNAPC4Q5SXM2 AC012645.4-201ENST00000610691 1061 ntBASIC29.34■■■□□ 2.29
SNAPC4Q5SXM2 AJ011932.1-201ENST00000621707 465 ntBASIC29.34■■■□□ 2.29
SNAPC4Q5SXM2 CYB561-213ENST00000581573 2344 ntAPPRIS P1 TSL 1 (best) BASIC29.34■■■□□ 2.29
SNAPC4Q5SXM2 ARSA-203ENST00000395619 1824 ntAPPRIS P1 TSL 5 BASIC29.34■■■□□ 2.29
SNAPC4Q5SXM2 MID1IP1-202ENST00000378474 1889 ntAPPRIS P1 TSL 1 (best) BASIC29.34■■■□□ 2.29
SNAPC4Q5SXM2 HOXC10-201ENST00000303460 1936 ntAPPRIS P1 TSL 1 (best) BASIC29.34■■■□□ 2.29
SNAPC4Q5SXM2 KRT85-202ENST00000544265 1387 ntTSL 2 BASIC29.34■■■□□ 2.29
SNAPC4Q5SXM2 KMT5B-203ENST00000401547 2666 ntTSL 1 (best) BASIC29.33■■■□□ 2.29
SNAPC4Q5SXM2 SLC34A3-202ENST00000538474 2162 ntAPPRIS P1 TSL 5 BASIC29.33■■■□□ 2.29
SNAPC4Q5SXM2 AL606970.3-201ENST00000446811 2246 ntTSL 2 BASIC29.33■■■□□ 2.29
SNAPC4Q5SXM2 RELB-201ENST00000221452 2294 ntAPPRIS P2 TSL 1 (best) BASIC29.33■■■□□ 2.29
SNAPC4Q5SXM2 ST6GALNAC4-201ENST00000335791 1691 ntAPPRIS P1 TSL 1 (best) BASIC29.33■■■□□ 2.29
SNAPC4Q5SXM2 AC132938.6-201ENST00000623828 1655 ntBASIC29.33■■■□□ 2.29
SNAPC4Q5SXM2 AOC1-202ENST00000416793 2453 ntTSL 1 (best) BASIC29.33■■■□□ 2.29
SNAPC4Q5SXM2 MORN1-203ENST00000378531 1798 ntAPPRIS P3 TSL 2 BASIC29.33■■■□□ 2.29
SNAPC4Q5SXM2 MRPL53-201ENST00000258105 1162 ntAPPRIS P1 TSL 1 (best) BASIC29.33■■■□□ 2.29
SNAPC4Q5SXM2 ATP23-201ENST00000300145 1245 ntAPPRIS P1 TSL 1 (best) BASIC29.33■■■□□ 2.29
SNAPC4Q5SXM2 HIST1H3D-201ENST00000356476 411 ntAPPRIS P1 BASIC29.33■■■□□ 2.29
SNAPC4Q5SXM2 RHOQP3-201ENST00000437982 621 ntBASIC29.33■■■□□ 2.29
SNAPC4Q5SXM2 AC008127.1-201ENST00000548424 499 ntTSL 5 BASIC29.33■■■□□ 2.29
SNAPC4Q5SXM2 AL391261.2-201ENST00000554907 773 ntTSL 2 BASIC29.33■■■□□ 2.29
SNAPC4Q5SXM2 AC243562.3-201ENST00000559866 1212 ntTSL 1 (best) BASIC29.33■■■□□ 2.29
SNAPC4Q5SXM2 AC022145.2-201ENST00000598203 171 ntBASIC29.33■■■□□ 2.29
SNAPC4Q5SXM2 AQP6-205ENST00000618286 829 ntTSL 5 BASIC29.33■■■□□ 2.29
SNAPC4Q5SXM2 EML2-220ENST00000589876 2364 ntAPPRIS ALT2 TSL 1 (best) BASIC29.33■■■□□ 2.29
SNAPC4Q5SXM2 ME2-218ENST00000640965 2476 ntTSL 5 BASIC29.33■■■□□ 2.29
SNAPC4Q5SXM2 TPBGL-201ENST00000562197 2793 ntAPPRIS P1 BASIC29.33■■■□□ 2.29
SNAPC4Q5SXM2 AD000671.2-201ENST00000589807 1925 ntAPPRIS P1 TSL 2 BASIC29.32■■■□□ 2.28
SNAPC4Q5SXM2 AC073107.1-201ENST00000633579 1962 ntTSL 5 BASIC29.32■■■□□ 2.28
SNAPC4Q5SXM2 IGFALS-201ENST00000215539 2116 ntAPPRIS P1 TSL 1 (best) BASIC29.32■■■□□ 2.28
Retrieved 100 of 98,524 protein–RNA pairs in 53.8 ms