Protein–RNA interactions for Protein: P35951

Ldlr, Low-density lipoprotein receptor, mousemouse

Predictions only

Length 862 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LdlrP35951 Vsig2-201ENSMUST00000002008 1166 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
LdlrP35951 AC160980.1-201ENSMUST00000224136 970 ntBASIC15.1■□□□□ 0.01
LdlrP35951 1700037H04Rik-201ENSMUST00000028800 832 ntAPPRIS ALT1 TSL 1 (best) BASIC15.1■□□□□ 0.01
LdlrP35951 Gimap3-201ENSMUST00000038811 1968 ntAPPRIS P1 TSL 2 BASIC15.1■□□□□ 0.01
LdlrP35951 Grm6-204ENSMUST00000171427 4330 ntAPPRIS P1 TSL 5 BASIC15.1■□□□□ 0.01
LdlrP35951 Sphk1-211ENSMUST00000141798 1532 ntAPPRIS P4 TSL 1 (best) BASIC15.1■□□□□ 0.01
LdlrP35951 Gm45844-204ENSMUST00000209833 1524 ntAPPRIS ALT2 TSL 5 BASIC15.1■□□□□ 0.01
LdlrP35951 Gpd1l-204ENSMUST00000146623 4391 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
LdlrP35951 Olfr317-202ENSMUST00000215513 2769 ntAPPRIS P1 TSL 5 BASIC15.1■□□□□ 0.01
LdlrP35951 Ubr2-202ENSMUST00000113337 7633 ntAPPRIS P3 TSL 1 (best) BASIC15.1■□□□□ 0.01
LdlrP35951 Efemp2-204ENSMUST00000165485 1557 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
LdlrP35951 Fkbp14-202ENSMUST00000117375 1830 ntTSL 1 (best) BASIC15.1■□□□□ 0.01
LdlrP35951 Pus1-204ENSMUST00000112426 1389 ntTSL 1 (best) BASIC15.1■□□□□ 0.01
LdlrP35951 Fzd6-202ENSMUST00000179165 4325 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
LdlrP35951 Fam219b-201ENSMUST00000093833 3001 ntTSL 1 (best) BASIC15.09■□□□□ 0.01
LdlrP35951 Tgfb1i1-207ENSMUST00000167965 1746 ntAPPRIS P2 TSL 1 (best) BASIC15.09■□□□□ 0.01
LdlrP35951 Garem2-201ENSMUST00000058045 3865 ntAPPRIS P1 TSL 5 BASIC15.09■□□□□ 0.01
LdlrP35951 Nde1-201ENSMUST00000023359 2287 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
LdlrP35951 Polr3d-202ENSMUST00000180358 2032 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
LdlrP35951 Ebf4-202ENSMUST00000110287 2580 ntAPPRIS ALT2 TSL 5 BASIC15.09■□□□□ 0.01
LdlrP35951 Ttpa-202ENSMUST00000117632 3123 ntTSL 5 BASIC15.09■□□□□ 0.01
LdlrP35951 Tpm1-215ENSMUST00000113705 1759 ntTSL 1 (best) BASIC15.09■□□□□ 0.01
LdlrP35951 A230065H16Rik-201ENSMUST00000150384 670 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
LdlrP35951 Rprl3-201ENSMUST00000157400 290 ntBASIC15.09■□□□□ 0.01
LdlrP35951 Sbsn-202ENSMUST00000182227 432 ntAPPRIS ALT2 TSL 5 BASIC15.09■□□□□ 0.01
LdlrP35951 Sbsn-203ENSMUST00000182229 732 ntAPPRIS ALT2 TSL 1 (best) BASIC15.09■□□□□ 0.01
LdlrP35951 Gm27002-201ENSMUST00000182789 620 ntTSL 2 BASIC15.09■□□□□ 0.01
LdlrP35951 Gm29246-201ENSMUST00000189221 349 ntTSL 3 BASIC15.09■□□□□ 0.01
LdlrP35951 Wdr1-205ENSMUST00000201260 2139 ntTSL 1 (best) BASIC15.09■□□□□ 0.01
LdlrP35951 AC138767.1-201ENSMUST00000222661 415 ntBASIC15.09■□□□□ 0.01
LdlrP35951 Rgp1-201ENSMUST00000030190 1292 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
LdlrP35951 Tbcc-201ENSMUST00000040434 1164 ntAPPRIS P1 BASIC15.09■□□□□ 0.01
LdlrP35951 Gm5145-201ENSMUST00000095633 837 ntAPPRIS P1 BASIC15.09■□□□□ 0.01
LdlrP35951 Map6d1-201ENSMUST00000040880 3273 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
LdlrP35951 Lmf1-202ENSMUST00000116641 1858 ntAPPRIS P2 TSL 5 BASIC15.09■□□□□ 0.01
LdlrP35951 Lmf1-201ENSMUST00000063344 1861 ntAPPRIS ALT2 TSL 5 BASIC15.09■□□□□ 0.01
LdlrP35951 Farp2-201ENSMUST00000120301 3937 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
LdlrP35951 Sik1-201ENSMUST00000024839 4511 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
LdlrP35951 Cope-201ENSMUST00000066469 1300 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
LdlrP35951 Kif26a-201ENSMUST00000128402 6918 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
LdlrP35951 Galnt13-203ENSMUST00000112635 7531 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
LdlrP35951 Irf7-201ENSMUST00000026571 1916 ntAPPRIS P3 TSL 1 (best) BASIC15.09■□□□□ 0.01
LdlrP35951 Map7d1-203ENSMUST00000122129 3249 ntAPPRIS ALT2 TSL 5 BASIC15.09■□□□□ 0.01
LdlrP35951 Sptlc1-201ENSMUST00000021920 2606 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
LdlrP35951 Hip1r-201ENSMUST00000000939 6735 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
LdlrP35951 Kit-204ENSMUST00000144270 5241 ntAPPRIS ALT2 TSL 1 (best) BASIC15.09■□□□□ 0.01
LdlrP35951 Gm14780-201ENSMUST00000118387 2737 ntBASIC15.08■□□□□ 0.01
LdlrP35951 Amz2-202ENSMUST00000092500 2816 ntAPPRIS P2 TSL 1 (best) BASIC15.08■□□□□ 0.01
LdlrP35951 Tnxb-202ENSMUST00000168533 9381 ntTSL 1 (best) BASIC15.08■□□□□ 0.01
LdlrP35951 Cpsf6-207ENSMUST00000176686 2200 ntTSL 1 (best) BASIC15.08■□□□□ 0
LdlrP35951 Irs3-201ENSMUST00000057314 2337 ntAPPRIS P2 TSL 1 (best) BASIC15.08■□□□□ 0
LdlrP35951 Mastl-201ENSMUST00000028119 5590 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0
LdlrP35951 Poc1b-204ENSMUST00000159990 3449 ntTSL 1 (best) BASIC15.08■□□□□ 0
LdlrP35951 Gm4609-201ENSMUST00000106443 1002 ntBASIC15.08■□□□□ 0
LdlrP35951 Gm5138-201ENSMUST00000113842 1002 ntBASIC15.08■□□□□ 0
LdlrP35951 Gm15191-201ENSMUST00000117933 1000 ntBASIC15.08■□□□□ 0
LdlrP35951 Gm12182-201ENSMUST00000118655 1008 ntBASIC15.08■□□□□ 0
LdlrP35951 Gm13882-201ENSMUST00000120886 1002 ntBASIC15.08■□□□□ 0
LdlrP35951 Gm12134-201ENSMUST00000122109 520 ntBASIC15.08■□□□□ 0
LdlrP35951 Gm10284-201ENSMUST00000145057 1005 ntBASIC15.08■□□□□ 0
LdlrP35951 Gm10481-201ENSMUST00000179228 1002 ntBASIC15.08■□□□□ 0
LdlrP35951 Gapdh-ps15-201ENSMUST00000180966 1002 ntBASIC15.08■□□□□ 0
LdlrP35951 Gm2574-201ENSMUST00000181051 1002 ntBASIC15.08■□□□□ 0
LdlrP35951 Gm3200-201ENSMUST00000181493 1002 ntBASIC15.08■□□□□ 0
LdlrP35951 Gm8825-201ENSMUST00000182565 998 ntBASIC15.08■□□□□ 0
LdlrP35951 Gm4518-201ENSMUST00000182638 718 ntBASIC15.08■□□□□ 0
LdlrP35951 Gm8330-201ENSMUST00000182754 1008 ntBASIC15.08■□□□□ 0
LdlrP35951 Gm4575-201ENSMUST00000182991 1002 ntBASIC15.08■□□□□ 0
LdlrP35951 Gm8709-201ENSMUST00000183230 1012 ntBASIC15.08■□□□□ 0
LdlrP35951 Pts-206ENSMUST00000214873 511 ntTSL 5 BASIC15.08■□□□□ 0
LdlrP35951 Gm6296-201ENSMUST00000222599 943 ntBASIC15.08■□□□□ 0
LdlrP35951 Gm10293-201ENSMUST00000076317 1002 ntBASIC15.08■□□□□ 0
LdlrP35951 Gm6316-201ENSMUST00000082064 1020 ntBASIC15.08■□□□□ 0
LdlrP35951 Cbfa2t3-201ENSMUST00000006525 3161 ntAPPRIS ALT2 TSL 2 BASIC15.08■□□□□ 0
LdlrP35951 Ogfrl1-201ENSMUST00000027343 4844 ntAPPRIS P1 TSL 3 BASIC15.08■□□□□ 0
LdlrP35951 Fam241b-204ENSMUST00000125704 1769 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0
LdlrP35951 Maea-201ENSMUST00000114449 2193 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0
LdlrP35951 Zfp410-201ENSMUST00000045931 2597 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0
LdlrP35951 Dusp15-203ENSMUST00000123121 2993 ntAPPRIS P1 TSL 3 BASIC15.08■□□□□ 0
LdlrP35951 Vps72-201ENSMUST00000009102 1456 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0
LdlrP35951 Lrrc24-202ENSMUST00000049956 1904 ntAPPRIS P1 TSL 1 (best) BASIC15.07■□□□□ 0
LdlrP35951 Klhl42-201ENSMUST00000036003 6267 ntAPPRIS P1 TSL 1 (best) BASIC15.07■□□□□ 0
LdlrP35951 Mpped1-201ENSMUST00000046168 3265 ntAPPRIS P1 TSL 1 (best) BASIC15.07■□□□□ 0
LdlrP35951 Tomm70a-201ENSMUST00000166897 3778 ntAPPRIS P1 TSL 1 (best) BASIC15.07■□□□□ 0
LdlrP35951 Gm10605-202ENSMUST00000183019 3198 ntBASIC15.07■□□□□ 0
LdlrP35951 Ttc24-201ENSMUST00000050258 2251 ntAPPRIS P1 TSL 1 (best) BASIC15.07■□□□□ 0
LdlrP35951 Gm13830-201ENSMUST00000124378 417 ntTSL 1 (best) BASIC15.07■□□□□ 0
LdlrP35951 Smarca5-ps-202ENSMUST00000171805 1284 ntBASIC15.07■□□□□ 0
LdlrP35951 4930477E14Rik-201ENSMUST00000181412 621 ntTSL 1 (best) BASIC15.07■□□□□ 0
LdlrP35951 Gm27217-201ENSMUST00000183438 882 ntTSL 1 (best) BASIC15.07■□□□□ 0
LdlrP35951 Msh3-205ENSMUST00000187424 666 ntTSL 2 BASIC15.07■□□□□ 0
LdlrP35951 Tac4-201ENSMUST00000021242 1251 ntAPPRIS P1 TSL 1 (best) BASIC15.07■□□□□ 0
LdlrP35951 Cbr2-201ENSMUST00000026148 1110 ntAPPRIS P1 TSL 1 (best) BASIC15.07■□□□□ 0
LdlrP35951 Sf3b6-201ENSMUST00000046207 1180 ntAPPRIS P1 TSL 1 (best) BASIC15.07■□□□□ 0
LdlrP35951 Mrpl34-201ENSMUST00000048914 607 ntAPPRIS P1 TSL 1 (best) BASIC15.07■□□□□ 0
LdlrP35951 Gfm2-211ENSMUST00000161913 1829 ntTSL 2 BASIC15.07■□□□□ 0
LdlrP35951 Tchp-201ENSMUST00000094441 2882 ntAPPRIS P1 TSL 1 (best) BASIC15.07■□□□□ 0
LdlrP35951 Il10rb-201ENSMUST00000023691 1850 ntAPPRIS P1 TSL 1 (best) BASIC15.07■□□□□ 0
LdlrP35951 Dmtn-201ENSMUST00000022694 5418 ntAPPRIS ALT1 TSL 5 BASIC15.07■□□□□ 0
LdlrP35951 Nrxn1-209ENSMUST00000161402 4953 ntTSL 5 BASIC15.07■□□□□ 0
Retrieved 100 of 76,532 protein–RNA pairs in 41.6 ms