Protein–RNA interactions for Protein: Q9ES97

Rtn3, Reticulon-3, mousemouse

Predictions only

Length 964 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rtn3Q9ES97 Crim1-201ENSMUST00000112498 5995 ntAPPRIS P1 TSL 1 (best) BASIC23.83■■□□□ 1.41
Rtn3Q9ES97 Dbndd2-202ENSMUST00000069385 1658 ntAPPRIS P1 TSL 1 (best) BASIC23.83■■□□□ 1.4
Rtn3Q9ES97 Scn1b-201ENSMUST00000098548 1573 ntAPPRIS P1 TSL 1 (best) BASIC23.82■■□□□ 1.4
Rtn3Q9ES97 Nelfe-202ENSMUST00000165953 1381 ntAPPRIS P1 TSL 1 (best) BASIC23.81■■□□□ 1.4
Rtn3Q9ES97 Hoxc13-201ENSMUST00000001700 2461 ntAPPRIS P1 TSL 1 (best) BASIC23.81■■□□□ 1.4
Rtn3Q9ES97 Tbr1-202ENSMUST00000102737 1406 ntTSL 2 BASIC23.81■■□□□ 1.4
Rtn3Q9ES97 Gm4419-202ENSMUST00000226239 1431 ntBASIC23.81■■□□□ 1.4
Rtn3Q9ES97 Hoxb9-201ENSMUST00000000010 2574 ntAPPRIS P1 TSL 1 (best) BASIC23.81■■□□□ 1.4
Rtn3Q9ES97 Trafd1-201ENSMUST00000042312 2503 ntAPPRIS P4 TSL 1 (best) BASIC23.8■■□□□ 1.4
Rtn3Q9ES97 Lsm14b-201ENSMUST00000055485 2534 ntAPPRIS P1 TSL 1 (best) BASIC23.8■■□□□ 1.4
Rtn3Q9ES97 Kdf1-202ENSMUST00000105901 1699 ntAPPRIS P2 TSL 1 (best) BASIC23.8■■□□□ 1.4
Rtn3Q9ES97 Azin2-202ENSMUST00000106068 2049 ntAPPRIS P1 TSL 5 BASIC23.8■■□□□ 1.4
Rtn3Q9ES97 Arpc2-203ENSMUST00000113820 1439 ntAPPRIS P1 TSL 1 (best) BASIC23.8■■□□□ 1.4
Rtn3Q9ES97 Crct1-201ENSMUST00000029521 718 ntAPPRIS P1 TSL 1 (best) BASIC23.8■■□□□ 1.4
Rtn3Q9ES97 Bag2-201ENSMUST00000044691 1860 ntAPPRIS P1 TSL 1 (best) BASIC23.8■■□□□ 1.4
Rtn3Q9ES97 Zfp768-202ENSMUST00000205266 2513 ntAPPRIS ALT2 TSL 5 BASIC23.8■■□□□ 1.4
Rtn3Q9ES97 Ltb4r1-201ENSMUST00000057569 1394 ntAPPRIS P1 TSL 1 (best) BASIC23.79■■□□□ 1.4
Rtn3Q9ES97 Smurf1-203ENSMUST00000110677 5420 ntTSL 5 BASIC23.79■■□□□ 1.4
Rtn3Q9ES97 Cdc42bpg-201ENSMUST00000025681 5995 ntAPPRIS P1 TSL 5 BASIC23.78■■□□□ 1.4
Rtn3Q9ES97 Pom121-201ENSMUST00000111171 5580 ntAPPRIS P1 TSL 1 (best) BASIC23.78■■□□□ 1.4
Rtn3Q9ES97 Frmd5-201ENSMUST00000110592 2222 ntAPPRIS P1 TSL 5 BASIC23.78■■□□□ 1.4
Rtn3Q9ES97 Mir3960-201ENSMUST00000198213 73 ntBASIC23.78■■□□□ 1.4
Rtn3Q9ES97 Stbd1-202ENSMUST00000200941 523 ntTSL 1 (best) BASIC23.78■■□□□ 1.4
Rtn3Q9ES97 Rnf39-201ENSMUST00000040498 1579 ntAPPRIS P1 TSL 1 (best) BASIC23.78■■□□□ 1.4
Rtn3Q9ES97 Sh3gl3-201ENSMUST00000032874 1647 ntAPPRIS P1 TSL 1 (best) BASIC23.77■■□□□ 1.4
Rtn3Q9ES97 2410022M11Rik-201ENSMUST00000186474 1911 ntBASIC23.77■■□□□ 1.4
Rtn3Q9ES97 Micu2-201ENSMUST00000022543 2329 ntAPPRIS P1 TSL 1 (best) BASIC23.77■■□□□ 1.4
Rtn3Q9ES97 Ildr2-203ENSMUST00000192638 2587 ntAPPRIS ALT2 TSL 1 (best) BASIC23.77■■□□□ 1.4
Rtn3Q9ES97 A230020J21Rik-202ENSMUST00000192407 1649 ntTSL 2 BASIC23.77■■□□□ 1.4
Rtn3Q9ES97 Mthfd2l-201ENSMUST00000071652 2159 ntAPPRIS P1 TSL 5 BASIC23.76■■□□□ 1.39
Rtn3Q9ES97 Cbln2-203ENSMUST00000122464 1907 ntAPPRIS P1 TSL 1 (best) BASIC23.76■■□□□ 1.39
Rtn3Q9ES97 Porcn-201ENSMUST00000077595 1872 ntAPPRIS P4 TSL 1 (best) BASIC23.76■■□□□ 1.39
Rtn3Q9ES97 Porcn-204ENSMUST00000089403 1854 ntAPPRIS ALT1 TSL 1 (best) BASIC23.76■■□□□ 1.39
Rtn3Q9ES97 Fbxw4-201ENSMUST00000046869 2068 ntAPPRIS P1 TSL 1 (best) BASIC23.75■■□□□ 1.39
Rtn3Q9ES97 Iars2-202ENSMUST00000110974 2431 ntTSL 1 (best) BASIC23.75■■□□□ 1.39
Rtn3Q9ES97 Tmem70-203ENSMUST00000177501 1636 ntAPPRIS P3 TSL 1 (best) BASIC23.75■■□□□ 1.39
Rtn3Q9ES97 Thap8-202ENSMUST00000108187 1184 ntAPPRIS P5 TSL 2 BASIC23.75■■□□□ 1.39
Rtn3Q9ES97 Atp5j-201ENSMUST00000023608 809 ntAPPRIS P1 TSL 1 (best) BASIC23.75■■□□□ 1.39
Rtn3Q9ES97 Nxph3-201ENSMUST00000058866 2099 ntAPPRIS P1 TSL 1 (best) BASIC23.75■■□□□ 1.39
Rtn3Q9ES97 Ddx43-201ENSMUST00000113367 2207 ntAPPRIS P1 TSL 5 BASIC23.75■■□□□ 1.39
Rtn3Q9ES97 Fbl-201ENSMUST00000042405 1197 ntAPPRIS P1 TSL 1 (best) BASIC23.74■■□□□ 1.39
Rtn3Q9ES97 P3h3-201ENSMUST00000023958 2850 ntAPPRIS P1 TSL 1 (best) BASIC23.74■■□□□ 1.39
Rtn3Q9ES97 Armc10-201ENSMUST00000072896 2221 ntAPPRIS P1 TSL 1 (best) BASIC23.74■■□□□ 1.39
Rtn3Q9ES97 Pkd1-207ENSMUST00000228550 1050 ntBASIC23.73■■□□□ 1.39
Rtn3Q9ES97 Traf3ip1-203ENSMUST00000189341 2257 ntAPPRIS ALT2 TSL 5 BASIC23.73■■□□□ 1.39
Rtn3Q9ES97 Gm26533-201ENSMUST00000180550 1790 ntTSL 1 (best) BASIC23.73■■□□□ 1.39
Rtn3Q9ES97 Abhd17c-201ENSMUST00000117085 2238 ntAPPRIS P1 TSL 1 (best) BASIC23.72■■□□□ 1.39
Rtn3Q9ES97 Strn3-202ENSMUST00000169503 2791 ntTSL 1 (best) BASIC23.71■■□□□ 1.39
Rtn3Q9ES97 Kctd2-201ENSMUST00000103035 1764 ntAPPRIS P1 TSL 1 (best) BASIC23.71■■□□□ 1.39
Rtn3Q9ES97 Map2k7-201ENSMUST00000003027 1626 ntTSL 1 (best) BASIC23.71■■□□□ 1.39
Rtn3Q9ES97 Gm13889-201ENSMUST00000099689 1386 ntBASIC23.71■■□□□ 1.39
Rtn3Q9ES97 Gm40983-202ENSMUST00000222598 1198 ntTSL 5 BASIC23.71■■□□□ 1.39
Rtn3Q9ES97 Gjd3-201ENSMUST00000062931 837 ntAPPRIS P1 BASIC23.71■■□□□ 1.39
Rtn3Q9ES97 Rfxap-201ENSMUST00000044373 2162 ntAPPRIS ALT2 TSL 1 (best) BASIC23.7■■□□□ 1.38
Rtn3Q9ES97 Nnat-208ENSMUST00000173595 927 ntTSL 2 BASIC23.7■■□□□ 1.38
Rtn3Q9ES97 Card19-201ENSMUST00000048946 804 ntAPPRIS P1 TSL 1 (best) BASIC23.7■■□□□ 1.38
Rtn3Q9ES97 Tmem192-202ENSMUST00000079896 916 ntTSL 1 (best) BASIC23.7■■□□□ 1.38
Rtn3Q9ES97 Srarp-201ENSMUST00000094544 905 ntAPPRIS P1 TSL 1 (best) BASIC23.7■■□□□ 1.38
Rtn3Q9ES97 Sorcs2-202ENSMUST00000070720 2089 ntTSL 1 (best) BASIC23.7■■□□□ 1.38
Rtn3Q9ES97 Spsb3-202ENSMUST00000068508 2004 ntTSL 1 (best) BASIC23.7■■□□□ 1.38
Rtn3Q9ES97 Capza2-201ENSMUST00000015877 2537 ntAPPRIS P1 TSL 1 (best) BASIC23.7■■□□□ 1.38
Rtn3Q9ES97 Kctd5-201ENSMUST00000017090 2443 ntAPPRIS P1 TSL 1 (best) BASIC23.69■■□□□ 1.38
Rtn3Q9ES97 Arpc5l-202ENSMUST00000112862 1339 ntAPPRIS P1 TSL 1 (best) BASIC23.69■■□□□ 1.38
Rtn3Q9ES97 Mtm1-204ENSMUST00000101501 770 ntTSL 1 (best) BASIC23.69■■□□□ 1.38
Rtn3Q9ES97 A030005K14Rik-201ENSMUST00000193762 1093 ntAPPRIS P1 BASIC23.69■■□□□ 1.38
Rtn3Q9ES97 Acvr2b-201ENSMUST00000035093 1729 ntTSL 5 BASIC23.69■■□□□ 1.38
Rtn3Q9ES97 Plpp2-204ENSMUST00000166804 1566 ntAPPRIS ALT2 TSL 1 (best) BASIC23.69■■□□□ 1.38
Rtn3Q9ES97 Dbp-201ENSMUST00000080885 1837 ntAPPRIS P1 TSL 1 (best) BASIC23.68■■□□□ 1.38
Rtn3Q9ES97 Cnep1r1-201ENSMUST00000095214 1731 ntAPPRIS P1 TSL 1 (best) BASIC23.68■■□□□ 1.38
Rtn3Q9ES97 Gng3-201ENSMUST00000096259 1699 ntAPPRIS P1 TSL 1 (best) BASIC23.68■■□□□ 1.38
Rtn3Q9ES97 AC125444.1-201ENSMUST00000223536 639 ntAPPRIS P1 BASIC23.68■■□□□ 1.38
Rtn3Q9ES97 Nckap5los-201ENSMUST00000159738 1712 ntTSL 2 BASIC23.67■■□□□ 1.38
Rtn3Q9ES97 Bean1-205ENSMUST00000212979 2131 ntAPPRIS P4 TSL 5 BASIC23.67■■□□□ 1.38
Rtn3Q9ES97 Ppp1cc-202ENSMUST00000102528 2384 ntAPPRIS P1 TSL 1 (best) BASIC23.67■■□□□ 1.38
Rtn3Q9ES97 Usp12-201ENSMUST00000085614 4327 ntAPPRIS P1 TSL 1 (best) BASIC23.66■■□□□ 1.38
Rtn3Q9ES97 Gm11687-201ENSMUST00000118911 886 ntBASIC23.66■■□□□ 1.38
Rtn3Q9ES97 Scarna2-201ENSMUST00000157560 414 ntBASIC23.66■■□□□ 1.38
Rtn3Q9ES97 Dcun1d5-201ENSMUST00000034499 1122 ntTSL 1 (best) BASIC23.66■■□□□ 1.38
Rtn3Q9ES97 Gadd45a-201ENSMUST00000043098 1223 ntAPPRIS P1 TSL 1 (best) BASIC23.66■■□□□ 1.38
Rtn3Q9ES97 Gm9806-201ENSMUST00000051080 552 ntBASIC23.66■■□□□ 1.38
Rtn3Q9ES97 E330009J07Rik-201ENSMUST00000039008 1949 ntTSL 1 (best) BASIC23.66■■□□□ 1.38
Rtn3Q9ES97 Lrrc59-201ENSMUST00000021239 2837 ntAPPRIS P1 TSL 1 (best) BASIC23.66■■□□□ 1.38
Rtn3Q9ES97 Dctpp1-201ENSMUST00000035276 676 ntAPPRIS P1 TSL 1 (best) BASIC23.65■■□□□ 1.38
Rtn3Q9ES97 Hs3st6-201ENSMUST00000044922 1219 ntAPPRIS P1 TSL 1 (best) BASIC23.65■■□□□ 1.38
Rtn3Q9ES97 Mlycd-201ENSMUST00000098367 2128 ntAPPRIS P1 TSL 1 (best) BASIC23.65■■□□□ 1.38
Rtn3Q9ES97 Ccnl2-201ENSMUST00000030944 2442 ntAPPRIS P1 TSL 1 (best) BASIC23.64■■□□□ 1.38
Rtn3Q9ES97 Rnf19b-206ENSMUST00000168461 2532 ntAPPRIS P2 TSL 5 BASIC23.64■■□□□ 1.38
Rtn3Q9ES97 Gm15918-201ENSMUST00000137259 689 ntTSL 3 BASIC23.64■■□□□ 1.37
Rtn3Q9ES97 Gm20512-201ENSMUST00000172483 618 ntTSL 1 (best) BASIC23.64■■□□□ 1.37
Rtn3Q9ES97 Gm45364-201ENSMUST00000210883 159 ntBASIC23.64■■□□□ 1.37
Rtn3Q9ES97 Dvl1-208ENSMUST00000168552 2776 ntAPPRIS P1 TSL 1 (best) BASIC23.64■■□□□ 1.37
Rtn3Q9ES97 Igfbp3-201ENSMUST00000020702 2421 ntAPPRIS P1 TSL 1 (best) BASIC23.64■■□□□ 1.37
Rtn3Q9ES97 Phf23-202ENSMUST00000101526 1706 ntAPPRIS ALT2 TSL 1 (best) BASIC23.64■■□□□ 1.37
Rtn3Q9ES97 Vkorc1l1-201ENSMUST00000051758 3112 ntAPPRIS P1 TSL 1 (best) BASIC23.63■■□□□ 1.37
Rtn3Q9ES97 Gm9888-201ENSMUST00000150678 965 ntTSL 1 (best) BASIC23.63■■□□□ 1.37
Rtn3Q9ES97 Ptx3-201ENSMUST00000029421 1898 ntAPPRIS P1 TSL 1 (best) BASIC23.63■■□□□ 1.37
Rtn3Q9ES97 Adgrb1-202ENSMUST00000170845 2704 ntTSL 5 BASIC23.63■■□□□ 1.37
Rtn3Q9ES97 Nsun2-208ENSMUST00000176485 2408 ntAPPRIS ALT2 TSL 5 BASIC23.63■■□□□ 1.37
Rtn3Q9ES97 Ybx3-202ENSMUST00000087865 1684 ntAPPRIS ALT2 TSL 1 (best) BASIC23.63■■□□□ 1.37
Rtn3Q9ES97 Abhd17b-201ENSMUST00000052556 2475 ntAPPRIS P1 TSL 5 BASIC23.62■■□□□ 1.37
Retrieved 100 of 76,532 protein–RNA pairs in 19.2 ms