Protein–RNA interactions for Protein: Q9ER62

Tnfrsf22, Tumor necrosis factor receptor superfamily member 22, mousemouse

Predictions only

Length 198 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Tnfrsf22Q9ER62 Kif1c-205ENSMUST00000152618 1943 ntTSL 1 (best) BASIC21.09■□□□□ 0.97
Tnfrsf22Q9ER62 Otud5-205ENSMUST00000115668 2543 ntTSL 1 (best) BASIC21.09■□□□□ 0.97
Tnfrsf22Q9ER62 Gm20458-201ENSMUST00000164863 1369 ntAPPRIS P1 TSL 5 BASIC21.09■□□□□ 0.97
Tnfrsf22Q9ER62 Sdccag3-202ENSMUST00000077983 1955 ntAPPRIS ALT2 TSL 1 (best) BASIC21.08■□□□□ 0.97
Tnfrsf22Q9ER62 Rasgef1c-203ENSMUST00000093142 2216 ntAPPRIS P3 TSL 1 (best) BASIC21.08■□□□□ 0.97
Tnfrsf22Q9ER62 Rab4a-202ENSMUST00000118535 1419 ntAPPRIS P1 TSL 1 (best) BASIC21.08■□□□□ 0.97
Tnfrsf22Q9ER62 Gm20109-201ENSMUST00000180802 671 ntTSL 1 (best) BASIC21.08■□□□□ 0.97
Tnfrsf22Q9ER62 Cbr3-201ENSMUST00000039620 1170 ntAPPRIS P1 TSL 1 (best) BASIC21.08■□□□□ 0.97
Tnfrsf22Q9ER62 Fam220a-201ENSMUST00000067145 2198 ntAPPRIS P1 TSL 1 (best) BASIC21.08■□□□□ 0.97
Tnfrsf22Q9ER62 Scn1b-201ENSMUST00000098548 1573 ntAPPRIS P1 TSL 1 (best) BASIC21.08■□□□□ 0.97
Tnfrsf22Q9ER62 Usf1-210ENSMUST00000167546 1822 ntAPPRIS P1 TSL 5 BASIC21.08■□□□□ 0.96
Tnfrsf22Q9ER62 Mapkap1-202ENSMUST00000113124 1758 ntAPPRIS ALT1 TSL 5 BASIC21.08■□□□□ 0.96
Tnfrsf22Q9ER62 Vegfa-211ENSMUST00000167860 975 ntTSL 1 (best) BASIC21.07■□□□□ 0.96
Tnfrsf22Q9ER62 Hnrnpk-210ENSMUST00000176558 1053 ntTSL 2 BASIC21.07■□□□□ 0.96
Tnfrsf22Q9ER62 Ildr2-202ENSMUST00000192426 1238 ntTSL 1 (best) BASIC21.07■□□□□ 0.96
Tnfrsf22Q9ER62 Vegfa-212ENSMUST00000214739 1107 ntAPPRIS ALT2 TSL 1 (best) BASIC21.07■□□□□ 0.96
Tnfrsf22Q9ER62 Vegfa-213ENSMUST00000217017 1179 ntAPPRIS P4 TSL 1 (best) BASIC21.07■□□□□ 0.96
Tnfrsf22Q9ER62 Ddrgk1-201ENSMUST00000089559 1238 ntAPPRIS P1 TSL 1 (best) BASIC21.07■□□□□ 0.96
Tnfrsf22Q9ER62 Ei24-202ENSMUST00000163192 2309 ntAPPRIS P1 TSL 1 (best) BASIC21.07■□□□□ 0.96
Tnfrsf22Q9ER62 Nhlrc1-201ENSMUST00000052747 2294 ntAPPRIS P1 BASIC21.07■□□□□ 0.96
Tnfrsf22Q9ER62 Kcnj6-201ENSMUST00000095873 1773 ntTSL 1 (best) BASIC21.06■□□□□ 0.96
Tnfrsf22Q9ER62 Maf-201ENSMUST00000069009 3223 ntAPPRIS ALT2 TSL 1 (best) BASIC21.06■□□□□ 0.96
Tnfrsf22Q9ER62 A030014E15Rik-201ENSMUST00000223400 796 ntAPPRIS P1 BASIC21.06■□□□□ 0.96
Tnfrsf22Q9ER62 Bloc1s2-201ENSMUST00000079033 878 ntAPPRIS P1 TSL 1 (best) BASIC21.06■□□□□ 0.96
Tnfrsf22Q9ER62 Gm7276-201ENSMUST00000097520 1252 ntAPPRIS P1 BASIC21.06■□□□□ 0.96
Tnfrsf22Q9ER62 Fzd9-201ENSMUST00000062572 2293 ntAPPRIS P1 BASIC21.06■□□□□ 0.96
Tnfrsf22Q9ER62 Pura-201ENSMUST00000051301 3145 ntAPPRIS P1 TSL 1 (best) BASIC21.05■□□□□ 0.96
Tnfrsf22Q9ER62 Krtap28-10-201ENSMUST00000188323 957 ntAPPRIS P1 BASIC21.05■□□□□ 0.96
Tnfrsf22Q9ER62 Fam149b-201ENSMUST00000037698 924 ntTSL 1 (best) BASIC21.05■□□□□ 0.96
Tnfrsf22Q9ER62 Rab4b-201ENSMUST00000093040 1192 ntAPPRIS P1 TSL 1 (best) BASIC21.05■□□□□ 0.96
Tnfrsf22Q9ER62 Ildr2-206ENSMUST00000194964 2467 ntAPPRIS ALT2 TSL 1 (best) BASIC21.05■□□□□ 0.96
Tnfrsf22Q9ER62 Maz-204ENSMUST00000206254 2282 ntTSL 5 BASIC21.04■□□□□ 0.96
Tnfrsf22Q9ER62 Btf3l4-203ENSMUST00000102741 1033 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
Tnfrsf22Q9ER62 Gm5067-201ENSMUST00000170449 1009 ntBASIC21.04■□□□□ 0.96
Tnfrsf22Q9ER62 Gm44428-201ENSMUST00000204474 874 ntBASIC21.04■□□□□ 0.96
Tnfrsf22Q9ER62 Olfm2-203ENSMUST00000215999 1895 ntAPPRIS ALT2 TSL 3 BASIC21.04■□□□□ 0.96
Tnfrsf22Q9ER62 Slc44a1-203ENSMUST00000107646 1974 ntTSL 5 BASIC21.04■□□□□ 0.96
Tnfrsf22Q9ER62 Csrp1-201ENSMUST00000027677 1823 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
Tnfrsf22Q9ER62 Csrp1-202ENSMUST00000097561 1828 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
Tnfrsf22Q9ER62 Fam168b-201ENSMUST00000047534 5030 ntAPPRIS P1 TSL 1 (best) BASIC21.03■□□□□ 0.96
Tnfrsf22Q9ER62 Tspan33-202ENSMUST00000115250 1977 ntAPPRIS ALT1 TSL 1 (best) BASIC21.03■□□□□ 0.96
Tnfrsf22Q9ER62 St7-205ENSMUST00000081635 2115 ntTSL 1 (best) BASIC21.03■□□□□ 0.96
Tnfrsf22Q9ER62 Mxra7-201ENSMUST00000021170 2063 ntAPPRIS P3 TSL 1 (best) BASIC21.03■□□□□ 0.96
Tnfrsf22Q9ER62 Prph-202ENSMUST00000047104 1865 ntAPPRIS P3 TSL 1 (best) BASIC21.03■□□□□ 0.96
Tnfrsf22Q9ER62 Smurf1-203ENSMUST00000110677 5420 ntTSL 5 BASIC21.02■□□□□ 0.95
Tnfrsf22Q9ER62 Slc39a13-203ENSMUST00000111436 1291 ntTSL 1 (best) BASIC21.01■□□□□ 0.95
Tnfrsf22Q9ER62 Nudt3-203ENSMUST00000114886 996 ntTSL 2 BASIC21.01■□□□□ 0.95
Tnfrsf22Q9ER62 Hpf1-204ENSMUST00000146863 531 ntTSL 2 BASIC21.01■□□□□ 0.95
Tnfrsf22Q9ER62 A830092H15Rik-201ENSMUST00000099182 1229 ntBASIC21.01■□□□□ 0.95
Tnfrsf22Q9ER62 Gm10499-202ENSMUST00000174778 1698 ntTSL 1 (best) BASIC21.01■□□□□ 0.95
Tnfrsf22Q9ER62 Gm10420-201ENSMUST00000121713 882 ntBASIC21■□□□□ 0.95
Tnfrsf22Q9ER62 Sft2d1-210ENSMUST00000154553 1049 ntAPPRIS P1 TSL 1 (best) BASIC21■□□□□ 0.95
Tnfrsf22Q9ER62 Ipmk-203ENSMUST00000121446 1492 ntAPPRIS ALT2 TSL 5 BASIC21■□□□□ 0.95
Tnfrsf22Q9ER62 Gpr27-201ENSMUST00000101122 2388 ntAPPRIS P1 BASIC21■□□□□ 0.95
Tnfrsf22Q9ER62 Emc8-208ENSMUST00000181950 747 ntTSL 2 BASIC20.99■□□□□ 0.95
Tnfrsf22Q9ER62 Efcc1-202ENSMUST00000159570 2293 ntAPPRIS P2 TSL 5 BASIC20.99■□□□□ 0.95
Tnfrsf22Q9ER62 D17Wsu92e-201ENSMUST00000075076 1470 ntTSL 1 (best) BASIC20.99■□□□□ 0.95
Tnfrsf22Q9ER62 Dennd5a-202ENSMUST00000106722 4862 ntTSL 1 (best) BASIC20.99■□□□□ 0.95
Tnfrsf22Q9ER62 Tsen34-204ENSMUST00000108630 1779 ntTSL 1 (best) BASIC20.98■□□□□ 0.95
Tnfrsf22Q9ER62 Siah1a-201ENSMUST00000045296 1968 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
Tnfrsf22Q9ER62 Pou4f1-201ENSMUST00000053016 4445 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
Tnfrsf22Q9ER62 Ebf4-203ENSMUST00000110288 2982 ntAPPRIS ALT2 TSL 5 BASIC20.98■□□□□ 0.95
Tnfrsf22Q9ER62 Slc25a33-201ENSMUST00000105686 1887 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
Tnfrsf22Q9ER62 Tmem9b-201ENSMUST00000033333 1703 ntAPPRIS P2 TSL 1 (best) BASIC20.98■□□□□ 0.95
Tnfrsf22Q9ER62 Tmem11-201ENSMUST00000062677 1457 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
Tnfrsf22Q9ER62 Shox2-204ENSMUST00000162439 1081 ntTSL 1 (best) BASIC20.97■□□□□ 0.95
Tnfrsf22Q9ER62 Lsm4-205ENSMUST00000210987 636 ntTSL 5 BASIC20.97■□□□□ 0.95
Tnfrsf22Q9ER62 Igfbp3-202ENSMUST00000135887 1709 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
Tnfrsf22Q9ER62 Rnf19b-201ENSMUST00000030584 2414 ntAPPRIS ALT2 TSL 5 BASIC20.97■□□□□ 0.95
Tnfrsf22Q9ER62 Ttc9-201ENSMUST00000036116 2042 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
Tnfrsf22Q9ER62 Zdhhc2-205ENSMUST00000167766 1759 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
Tnfrsf22Q9ER62 Htatsf1-202ENSMUST00000114751 1128 ntTSL 1 (best) BASIC20.96■□□□□ 0.95
Tnfrsf22Q9ER62 Dnajc21-201ENSMUST00000136591 2060 ntAPPRIS P1 TSL 5 BASIC20.96■□□□□ 0.95
Tnfrsf22Q9ER62 Tsc22d1-204ENSMUST00000110888 4999 ntTSL 1 (best) BASIC20.96■□□□□ 0.95
Tnfrsf22Q9ER62 Sh3rf1-201ENSMUST00000034060 5479 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
Tnfrsf22Q9ER62 Sike1-202ENSMUST00000119450 774 ntTSL 3 BASIC20.95■□□□□ 0.94
Tnfrsf22Q9ER62 Pgls-201ENSMUST00000034264 893 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
Tnfrsf22Q9ER62 Crim1-201ENSMUST00000112498 5995 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
Tnfrsf22Q9ER62 Snta1-201ENSMUST00000028991 2125 ntAPPRIS ALT2 TSL 1 (best) BASIC20.95■□□□□ 0.94
Tnfrsf22Q9ER62 Galr3-201ENSMUST00000058004 1245 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
Tnfrsf22Q9ER62 AC164433.2-201ENSMUST00000226346 1701 ntBASIC20.94■□□□□ 0.94
Tnfrsf22Q9ER62 Srd5a3-201ENSMUST00000031143 1747 ntAPPRIS P2 TSL 1 (best) BASIC20.93■□□□□ 0.94
Tnfrsf22Q9ER62 Epop-201ENSMUST00000052281 2314 ntAPPRIS P1 BASIC20.93■□□□□ 0.94
Tnfrsf22Q9ER62 Cyp2r1-202ENSMUST00000119712 917 ntTSL 5 BASIC20.93■□□□□ 0.94
Tnfrsf22Q9ER62 H1fx-201ENSMUST00000056403 1217 ntAPPRIS P1 BASIC20.93■□□□□ 0.94
Tnfrsf22Q9ER62 Spsb3-205ENSMUST00000120943 1949 ntAPPRIS ALT2 TSL 1 (best) BASIC20.92■□□□□ 0.94
Tnfrsf22Q9ER62 Hdac2-201ENSMUST00000019911 2005 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
Tnfrsf22Q9ER62 Tbc1d25-203ENSMUST00000143984 2184 ntAPPRIS ALT2 TSL 5 BASIC20.92■□□□□ 0.94
Tnfrsf22Q9ER62 Hnrnpul1-202ENSMUST00000108401 1240 ntTSL 1 (best) BASIC20.92■□□□□ 0.94
Tnfrsf22Q9ER62 Aldoa-214ENSMUST00000207534 741 ntAPPRIS P1 TSL 5 BASIC20.92■□□□□ 0.94
Tnfrsf22Q9ER62 B230377A18Rik-202ENSMUST00000192921 1364 ntBASIC20.92■□□□□ 0.94
Tnfrsf22Q9ER62 Usp2-206ENSMUST00000176416 1486 ntAPPRIS ALT2 TSL 1 (best) BASIC20.92■□□□□ 0.94
Tnfrsf22Q9ER62 Hnrnpl-201ENSMUST00000038572 2142 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
Tnfrsf22Q9ER62 Fam126a-206ENSMUST00000197617 2288 ntTSL 5 BASIC20.92■□□□□ 0.94
Tnfrsf22Q9ER62 Runx2-211ENSMUST00000162629 1607 ntAPPRIS ALT2 TSL 5 BASIC20.9■□□□□ 0.94
Tnfrsf22Q9ER62 Tmem106c-201ENSMUST00000064200 1635 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
Tnfrsf22Q9ER62 Zc3h6-201ENSMUST00000110319 1484 ntTSL 1 (best) BASIC20.9■□□□□ 0.94
Tnfrsf22Q9ER62 Ppp1r35-201ENSMUST00000031739 956 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
Tnfrsf22Q9ER62 Foxd2-201ENSMUST00000068654 2592 ntAPPRIS P1 BASIC20.9■□□□□ 0.94
Tnfrsf22Q9ER62 Ran-202ENSMUST00000111343 2423 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.94
Retrieved 100 of 76,532 protein–RNA pairs in 14.3 ms