Protein–RNA interactions for Protein: Q9DB85

Rrp8, Ribosomal RNA-processing protein 8, mousemouse

Known RBP Predictions only

Length 457 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rrp8Q9DB85 Phf2os1-201ENSMUST00000123212 498 ntTSL 3 BASIC22.25■■□□□ 1.15
Rrp8Q9DB85 Casd1-204ENSMUST00000181734 1063 ntTSL 5 BASIC22.25■■□□□ 1.15
Rrp8Q9DB85 Ak2-201ENSMUST00000030583 986 ntAPPRIS P4 TSL 1 (best) BASIC22.25■■□□□ 1.15
Rrp8Q9DB85 Tirap-205ENSMUST00000176685 1783 ntAPPRIS P1 TSL 1 (best) BASIC22.25■■□□□ 1.15
Rrp8Q9DB85 Vax1-201ENSMUST00000172821 1044 ntAPPRIS P1 TSL 1 (best) BASIC22.24■■□□□ 1.15
Rrp8Q9DB85 Mt2-201ENSMUST00000034214 511 ntAPPRIS P1 TSL 1 (best) BASIC22.24■■□□□ 1.15
Rrp8Q9DB85 B230377A18Rik-202ENSMUST00000192921 1364 ntBASIC22.24■■□□□ 1.15
Rrp8Q9DB85 Amer2-203ENSMUST00000225247 2662 ntBASIC22.24■■□□□ 1.15
Rrp8Q9DB85 Dhrs11-201ENSMUST00000047560 1254 ntAPPRIS P1 TSL 1 (best) BASIC22.23■■□□□ 1.15
Rrp8Q9DB85 Runx2-211ENSMUST00000162629 1607 ntAPPRIS ALT2 TSL 5 BASIC22.23■■□□□ 1.15
Rrp8Q9DB85 Jdp2-201ENSMUST00000050687 1643 ntAPPRIS P1 TSL 1 (best) BASIC22.23■■□□□ 1.15
Rrp8Q9DB85 H2afy-202ENSMUST00000045788 1933 ntTSL 1 (best) BASIC22.23■■□□□ 1.15
Rrp8Q9DB85 Gm43566-201ENSMUST00000196851 808 ntBASIC22.22■■□□□ 1.15
Rrp8Q9DB85 AC093043.1-201ENSMUST00000226700 898 ntBASIC22.22■■□□□ 1.15
Rrp8Q9DB85 Mpnd-208ENSMUST00000159996 1444 ntAPPRIS ALT2 TSL 5 BASIC22.22■■□□□ 1.15
Rrp8Q9DB85 Pdpk1-203ENSMUST00000115407 1730 ntTSL 5 BASIC22.21■■□□□ 1.15
Rrp8Q9DB85 Suv39h2-202ENSMUST00000060618 1831 ntTSL 1 (best) BASIC22.21■■□□□ 1.15
Rrp8Q9DB85 Unc119-201ENSMUST00000002127 1329 ntAPPRIS P1 TSL 1 (best) BASIC22.21■■□□□ 1.15
Rrp8Q9DB85 Tmem11-201ENSMUST00000062677 1457 ntAPPRIS P1 TSL 1 (best) BASIC22.21■■□□□ 1.15
Rrp8Q9DB85 Gng12-203ENSMUST00000114224 680 ntAPPRIS P1 TSL 3 BASIC22.2■■□□□ 1.14
Rrp8Q9DB85 Gng12-206ENSMUST00000114227 1125 ntAPPRIS P1 TSL 1 (best) BASIC22.2■■□□□ 1.14
Rrp8Q9DB85 A930002H24Rik-201ENSMUST00000050753 492 ntAPPRIS P1 BASIC22.2■■□□□ 1.14
Rrp8Q9DB85 Ube2k-206ENSMUST00000201984 1449 ntTSL 3 BASIC22.2■■□□□ 1.14
Rrp8Q9DB85 0610009L18Rik-201ENSMUST00000143813 619 ntTSL 2 BASIC22.19■■□□□ 1.14
Rrp8Q9DB85 Gm45444-201ENSMUST00000211394 898 ntBASIC22.19■■□□□ 1.14
Rrp8Q9DB85 Sarnp-203ENSMUST00000219512 953 ntTSL 3 BASIC22.19■■□□□ 1.14
Rrp8Q9DB85 Fgf16-201ENSMUST00000033581 1645 ntAPPRIS P1 TSL 1 (best) BASIC22.19■■□□□ 1.14
Rrp8Q9DB85 Ints11-202ENSMUST00000120794 1884 ntTSL 5 BASIC22.19■■□□□ 1.14
Rrp8Q9DB85 Mypop-203ENSMUST00000131087 1951 ntAPPRIS P1 TSL 5 BASIC22.19■■□□□ 1.14
Rrp8Q9DB85 Vdac1-202ENSMUST00000102758 2022 ntAPPRIS P1 TSL 1 (best) BASIC22.18■■□□□ 1.14
Rrp8Q9DB85 Gm13238-201ENSMUST00000117655 780 ntBASIC22.18■■□□□ 1.14
Rrp8Q9DB85 Fam168b-204ENSMUST00000170092 941 ntTSL 5 BASIC22.18■■□□□ 1.14
Rrp8Q9DB85 Rps24-207ENSMUST00000224568 714 ntBASIC22.18■■□□□ 1.14
Rrp8Q9DB85 Bri3-201ENSMUST00000056578 955 ntAPPRIS P1 TSL 1 (best) BASIC22.18■■□□□ 1.14
Rrp8Q9DB85 Syce2-202ENSMUST00000136026 1686 ntAPPRIS P3 TSL 1 (best) BASIC22.17■■□□□ 1.14
Rrp8Q9DB85 Exosc8-201ENSMUST00000029316 1300 ntAPPRIS P1 TSL 1 (best) BASIC22.17■■□□□ 1.14
Rrp8Q9DB85 Ndfip1-201ENSMUST00000025293 930 ntAPPRIS P1 TSL 1 (best) BASIC22.17■■□□□ 1.14
Rrp8Q9DB85 Ccna1-202ENSMUST00000197238 1719 ntAPPRIS P1 TSL 5 BASIC22.16■■□□□ 1.14
Rrp8Q9DB85 Cckbr-202ENSMUST00000181339 1326 ntTSL 1 (best) BASIC22.15■■□□□ 1.14
Rrp8Q9DB85 Gm28040-202ENSMUST00000184603 890 ntAPPRIS P1 TSL 2 BASIC22.15■■□□□ 1.14
Rrp8Q9DB85 Clpp-201ENSMUST00000002735 1207 ntAPPRIS P1 TSL 1 (best) BASIC22.15■■□□□ 1.14
Rrp8Q9DB85 Kcnk2-205ENSMUST00000192723 1642 ntAPPRIS ALT1 TSL 1 (best) BASIC22.15■■□□□ 1.14
Rrp8Q9DB85 Sox17-202ENSMUST00000116652 1512 ntAPPRIS P1 TSL 1 (best) BASIC22.15■■□□□ 1.14
Rrp8Q9DB85 Fn1-208ENSMUST00000186940 1350 ntTSL 1 (best) BASIC22.14■■□□□ 1.14
Rrp8Q9DB85 Tmem70-203ENSMUST00000177501 1636 ntAPPRIS P3 TSL 1 (best) BASIC22.14■■□□□ 1.14
Rrp8Q9DB85 Socs2-202ENSMUST00000119917 948 ntAPPRIS P1 TSL 1 (best) BASIC22.14■■□□□ 1.13
Rrp8Q9DB85 H2afj-202ENSMUST00000203982 577 ntAPPRIS ALT1 TSL 3 BASIC22.14■■□□□ 1.13
Rrp8Q9DB85 Srcap-202ENSMUST00000098025 1257 ntTSL 5 BASIC22.14■■□□□ 1.13
Rrp8Q9DB85 Hrasls-204ENSMUST00000162747 854 ntAPPRIS P1 TSL 1 (best) BASIC22.13■■□□□ 1.13
Rrp8Q9DB85 Gm20684-201ENSMUST00000176744 380 ntTSL 3 BASIC22.13■■□□□ 1.13
Rrp8Q9DB85 Adap1-201ENSMUST00000110865 2557 ntAPPRIS P1 TSL 5 BASIC22.13■■□□□ 1.13
Rrp8Q9DB85 Pde8b-204ENSMUST00000159608 2370 ntTSL 5 BASIC22.12■■□□□ 1.13
Rrp8Q9DB85 Hdgf-201ENSMUST00000005017 2245 ntAPPRIS P1 TSL 1 (best) BASIC22.12■■□□□ 1.13
Rrp8Q9DB85 Dusp2-201ENSMUST00000028846 1617 ntAPPRIS P1 TSL 1 (best) BASIC22.12■■□□□ 1.13
Rrp8Q9DB85 Kcnj6-201ENSMUST00000095873 1773 ntTSL 1 (best) BASIC22.12■■□□□ 1.13
Rrp8Q9DB85 Terf2-203ENSMUST00000116425 2471 ntTSL 1 (best) BASIC22.12■■□□□ 1.13
Rrp8Q9DB85 Gsc2-201ENSMUST00000012279 1172 ntAPPRIS P1 TSL 1 (best) BASIC22.11■■□□□ 1.13
Rrp8Q9DB85 Gm45095-201ENSMUST00000206736 254 ntTSL 5 BASIC22.11■■□□□ 1.13
Rrp8Q9DB85 Mogs-201ENSMUST00000032114 2780 ntAPPRIS P1 TSL 1 (best) BASIC22.11■■□□□ 1.13
Rrp8Q9DB85 Eif5a-213ENSMUST00000164359 1281 ntAPPRIS P1 TSL 5 BASIC22.1■■□□□ 1.13
Rrp8Q9DB85 Vegfb-201ENSMUST00000025914 1281 ntAPPRIS P3 TSL 1 (best) BASIC22.1■■□□□ 1.13
Rrp8Q9DB85 Rbm45-201ENSMUST00000046389 1898 ntAPPRIS P1 TSL 1 (best) BASIC22.1■■□□□ 1.13
Rrp8Q9DB85 Scn1b-201ENSMUST00000098548 1573 ntAPPRIS P1 TSL 1 (best) BASIC22.1■■□□□ 1.13
Rrp8Q9DB85 Thra-202ENSMUST00000103139 2246 ntAPPRIS P1 TSL 1 (best) BASIC22.1■■□□□ 1.13
Rrp8Q9DB85 Hoxd9-201ENSMUST00000059272 2136 ntAPPRIS P1 TSL 1 (best) BASIC22.09■■□□□ 1.13
Rrp8Q9DB85 Arhgap39-204ENSMUST00000176219 542 ntTSL 5 BASIC22.09■■□□□ 1.13
Rrp8Q9DB85 Gm20208-202ENSMUST00000219905 1528 ntTSL 1 (best) BASIC22.09■■□□□ 1.13
Rrp8Q9DB85 Nucks1-203ENSMUST00000189946 2375 ntAPPRIS ALT2 TSL 1 (best) BASIC22.09■■□□□ 1.13
Rrp8Q9DB85 Smurf1-203ENSMUST00000110677 5420 ntTSL 5 BASIC22.08■■□□□ 1.13
Rrp8Q9DB85 Rps19-202ENSMUST00000108429 633 ntAPPRIS P1 TSL 2 BASIC22.08■■□□□ 1.13
Rrp8Q9DB85 Ppia-202ENSMUST00000132846 1170 ntAPPRIS P1 TSL 1 (best) BASIC22.08■■□□□ 1.13
Rrp8Q9DB85 Rpl34-201ENSMUST00000062601 624 ntAPPRIS P1 TSL 1 (best) BASIC22.08■■□□□ 1.13
Rrp8Q9DB85 Dtnb-203ENSMUST00000164578 2355 ntTSL 1 (best) BASIC22.07■■□□□ 1.12
Rrp8Q9DB85 Glrx3-201ENSMUST00000064404 1685 ntAPPRIS P2 TSL 1 (best) BASIC22.07■■□□□ 1.12
Rrp8Q9DB85 Tmpo-203ENSMUST00000092219 1854 ntTSL 1 (best) BASIC22.07■■□□□ 1.12
Rrp8Q9DB85 1700065D16Rik-202ENSMUST00000188975 506 ntTSL 3 BASIC22.07■■□□□ 1.12
Rrp8Q9DB85 Tmem106c-201ENSMUST00000064200 1635 ntAPPRIS P1 TSL 1 (best) BASIC22.06■■□□□ 1.12
Rrp8Q9DB85 Papola-211ENSMUST00000166735 1033 ntTSL 1 (best) BASIC22.06■■□□□ 1.12
Rrp8Q9DB85 Gm42501-201ENSMUST00000200220 1026 ntBASIC22.06■■□□□ 1.12
Rrp8Q9DB85 March2-203ENSMUST00000172767 1381 ntAPPRIS P1 TSL 1 (best) BASIC22.06■■□□□ 1.12
Rrp8Q9DB85 Tmem55b-209ENSMUST00000162957 1465 ntTSL 1 (best) BASIC22.06■■□□□ 1.12
Rrp8Q9DB85 Hrh3-205ENSMUST00000165762 1368 ntAPPRIS ALT2 TSL 5 BASIC22.05■■□□□ 1.12
Rrp8Q9DB85 Ffar4-201ENSMUST00000067098 1393 ntAPPRIS P1 TSL 1 (best) BASIC22.05■■□□□ 1.12
Rrp8Q9DB85 Gm16599-201ENSMUST00000148082 1182 ntTSL 1 (best) BASIC22.05■■□□□ 1.12
Rrp8Q9DB85 1700097N02Rik-201ENSMUST00000188852 845 ntTSL 3 BASIC22.05■■□□□ 1.12
Rrp8Q9DB85 A430027H14Rik-201ENSMUST00000191809 1467 ntBASIC22.04■■□□□ 1.12
Rrp8Q9DB85 Susd3-203ENSMUST00000119721 1249 ntAPPRIS ALT2 TSL 1 (best) BASIC22.04■■□□□ 1.12
Rrp8Q9DB85 Pmpca-202ENSMUST00000114093 1638 ntTSL 1 (best) BASIC22.04■■□□□ 1.12
Rrp8Q9DB85 Btg3-201ENSMUST00000023570 1414 ntAPPRIS P1 TSL 1 (best) BASIC22.04■■□□□ 1.12
Rrp8Q9DB85 Zfp346-203ENSMUST00000159278 1253 ntAPPRIS ALT2 TSL 5 BASIC22.03■■□□□ 1.12
Rrp8Q9DB85 Gm45102-201ENSMUST00000207427 857 ntBASIC22.03■■□□□ 1.12
Rrp8Q9DB85 Pcf11-204ENSMUST00000208058 461 ntTSL 5 BASIC22.03■■□□□ 1.12
Rrp8Q9DB85 Fkbp1b-201ENSMUST00000020964 976 ntAPPRIS P1 TSL 1 (best) BASIC22.03■■□□□ 1.12
Rrp8Q9DB85 Tmem238-201ENSMUST00000168578 1375 ntAPPRIS P1 TSL 1 (best) BASIC22.02■■□□□ 1.12
Rrp8Q9DB85 Tmem235-201ENSMUST00000093905 1820 ntAPPRIS P1 TSL 5 BASIC22.02■■□□□ 1.12
Rrp8Q9DB85 Sos2-201ENSMUST00000035773 5607 ntAPPRIS P2 TSL 5 BASIC22.02■■□□□ 1.12
Rrp8Q9DB85 Gt(ROSA)26Sor-201ENSMUST00000124246 1181 ntTSL 1 (best) BASIC22.02■■□□□ 1.12
Rrp8Q9DB85 Camk2n2-201ENSMUST00000052939 1291 ntAPPRIS P1 TSL 1 (best) BASIC22.02■■□□□ 1.12
Rrp8Q9DB85 Gm14117-201ENSMUST00000122417 843 ntBASIC22.01■■□□□ 1.11
Rrp8Q9DB85 Gm9767-201ENSMUST00000041011 1193 ntAPPRIS P1 BASIC22.01■■□□□ 1.11
Retrieved 100 of 76,532 protein–RNA pairs in 31.3 ms