Protein–RNA interactions for Protein: Q920F6

Smc1b, Structural maintenance of chromosomes protein 1B, mousemouse

Predictions only

Length 1,248 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Smc1bQ920F6 Ppp4c-201ENSMUST00000032936 1359 ntAPPRIS P1 TSL 1 (best) BASIC25.81■■□□□ 1.72
Smc1bQ920F6 Gm7544-201ENSMUST00000222426 828 ntAPPRIS P1 BASIC25.8■■□□□ 1.72
Smc1bQ920F6 Tmem42-201ENSMUST00000084733 1041 ntAPPRIS P1 TSL 1 (best) BASIC25.8■■□□□ 1.72
Smc1bQ920F6 Serpinb6a-206ENSMUST00000167163 1654 ntAPPRIS P1 TSL 5 BASIC25.79■■□□□ 1.72
Smc1bQ920F6 Lmo2-202ENSMUST00000111140 1706 ntTSL 1 (best) BASIC25.79■■□□□ 1.72
Smc1bQ920F6 Inafm1-201ENSMUST00000169612 1605 ntAPPRIS P1 BASIC25.78■■□□□ 1.72
Smc1bQ920F6 Cd320-201ENSMUST00000002379 2209 ntAPPRIS P3 TSL 1 (best) BASIC25.78■■□□□ 1.72
Smc1bQ920F6 Gm39157-201ENSMUST00000212322 1180 ntTSL 5 BASIC25.78■■□□□ 1.72
Smc1bQ920F6 Hras-202ENSMUST00000097957 1199 ntAPPRIS P1 TSL 2 BASIC25.78■■□□□ 1.72
Smc1bQ920F6 Acot5-201ENSMUST00000046422 1518 ntAPPRIS P1 TSL 1 (best) BASIC25.78■■□□□ 1.72
Smc1bQ920F6 Psmb8-201ENSMUST00000025196 1628 ntAPPRIS P1 TSL 1 (best) BASIC25.77■■□□□ 1.72
Smc1bQ920F6 Hibadh-201ENSMUST00000031788 1825 ntAPPRIS P1 TSL 1 (best) BASIC25.77■■□□□ 1.72
Smc1bQ920F6 Slc35a2-211ENSMUST00000208640 486 ntTSL 5 BASIC25.76■■□□□ 1.71
Smc1bQ920F6 Foxk2-201ENSMUST00000106113 5029 ntAPPRIS P1 TSL 1 (best) BASIC25.75■■□□□ 1.71
Smc1bQ920F6 Msto1-202ENSMUST00000126245 1875 ntAPPRIS P1 TSL 1 (best) BASIC25.75■■□□□ 1.71
Smc1bQ920F6 Nog-201ENSMUST00000061728 1695 ntAPPRIS P1 BASIC25.75■■□□□ 1.71
Smc1bQ920F6 Gm13594-201ENSMUST00000137582 476 ntTSL 1 (best) BASIC25.75■■□□□ 1.71
Smc1bQ920F6 Mt2-201ENSMUST00000034214 511 ntAPPRIS P1 TSL 1 (best) BASIC25.75■■□□□ 1.71
Smc1bQ920F6 AC093043.1-201ENSMUST00000226700 898 ntBASIC25.74■■□□□ 1.71
Smc1bQ920F6 Syndig1l-201ENSMUST00000095550 2524 ntAPPRIS P1 TSL 1 (best) BASIC25.73■■□□□ 1.71
Smc1bQ920F6 Sin3b-202ENSMUST00000109950 1024 ntTSL 1 (best) BASIC25.73■■□□□ 1.71
Smc1bQ920F6 Gm2415-202ENSMUST00000134688 401 ntTSL 2 BASIC25.73■■□□□ 1.71
Smc1bQ920F6 Phf2os1-201ENSMUST00000123212 498 ntTSL 3 BASIC25.72■■□□□ 1.71
Smc1bQ920F6 AC153911.1-201ENSMUST00000220378 758 ntBASIC25.72■■□□□ 1.71
Smc1bQ920F6 Foxn3-209ENSMUST00000177451 2882 ntAPPRIS P1 TSL 1 (best) BASIC25.72■■□□□ 1.71
Smc1bQ920F6 Ube2j2-202ENSMUST00000103175 1309 ntAPPRIS P1 TSL 1 (best) BASIC25.71■■□□□ 1.71
Smc1bQ920F6 B230322F03Rik-201ENSMUST00000181932 1569 ntBASIC25.71■■□□□ 1.71
Smc1bQ920F6 Gm12905-201ENSMUST00000153814 658 ntTSL 2 BASIC25.71■■□□□ 1.71
Smc1bQ920F6 Rps24-207ENSMUST00000224568 714 ntBASIC25.71■■□□□ 1.71
Smc1bQ920F6 Galr3-201ENSMUST00000058004 1245 ntAPPRIS P1 TSL 1 (best) BASIC25.71■■□□□ 1.71
Smc1bQ920F6 Spryd7-202ENSMUST00000100496 1459 ntTSL 1 (best) BASIC25.71■■□□□ 1.71
Smc1bQ920F6 Dexi-201ENSMUST00000038281 1389 ntAPPRIS P1 TSL 1 (best) BASIC25.7■■□□□ 1.71
Smc1bQ920F6 Tdp2-201ENSMUST00000038039 1957 ntAPPRIS P1 TSL 1 (best) BASIC25.7■■□□□ 1.7
Smc1bQ920F6 Becn1-216ENSMUST00000170502 725 ntTSL 1 (best) BASIC25.7■■□□□ 1.7
Smc1bQ920F6 Ildr2-206ENSMUST00000194964 2467 ntAPPRIS ALT2 TSL 1 (best) BASIC25.7■■□□□ 1.7
Smc1bQ920F6 Plpp2-204ENSMUST00000166804 1566 ntAPPRIS ALT2 TSL 1 (best) BASIC25.69■■□□□ 1.7
Smc1bQ920F6 St3gal2-202ENSMUST00000117534 2177 ntTSL 1 (best) BASIC25.69■■□□□ 1.7
Smc1bQ920F6 Pou4f1-201ENSMUST00000053016 4445 ntAPPRIS P1 TSL 1 (best) BASIC25.69■■□□□ 1.7
Smc1bQ920F6 AC161180.1-201ENSMUST00000223439 933 ntAPPRIS P1 BASIC25.69■■□□□ 1.7
Smc1bQ920F6 Terc-201ENSMUST00000082862 423 ntBASIC25.69■■□□□ 1.7
Smc1bQ920F6 Fam174a-201ENSMUST00000059975 2112 ntAPPRIS P1 TSL 1 (best) BASIC25.69■■□□□ 1.7
Smc1bQ920F6 Ssbp4-205ENSMUST00000210369 1828 ntTSL 2 BASIC25.68■■□□□ 1.7
Smc1bQ920F6 Coprs-201ENSMUST00000033839 793 ntAPPRIS P1 TSL 1 (best) BASIC25.68■■□□□ 1.7
Smc1bQ920F6 Gm7276-201ENSMUST00000097520 1252 ntAPPRIS P1 BASIC25.68■■□□□ 1.7
Smc1bQ920F6 Hnrnpl-201ENSMUST00000038572 2142 ntAPPRIS P1 TSL 1 (best) BASIC25.67■■□□□ 1.7
Smc1bQ920F6 Usf2-203ENSMUST00000162228 960 ntTSL 5 BASIC25.67■■□□□ 1.7
Smc1bQ920F6 Fam98c-209ENSMUST00000164589 1293 ntAPPRIS P1 TSL 5 BASIC25.67■■□□□ 1.7
Smc1bQ920F6 AC102554.1-201ENSMUST00000216236 537 ntTSL 5 BASIC25.67■■□□□ 1.7
Smc1bQ920F6 P3h4-201ENSMUST00000066489 2178 ntAPPRIS P2 TSL 1 (best) BASIC25.67■■□□□ 1.7
Smc1bQ920F6 Eif5a-208ENSMUST00000108611 1353 ntAPPRIS P1 TSL 1 (best) BASIC25.67■■□□□ 1.7
Smc1bQ920F6 Papola-211ENSMUST00000166735 1033 ntTSL 1 (best) BASIC25.66■■□□□ 1.7
Smc1bQ920F6 AC166358.2-201ENSMUST00000223403 734 ntTSL 5 BASIC25.66■■□□□ 1.7
Smc1bQ920F6 Cdr2-201ENSMUST00000033169 2525 ntAPPRIS P1 TSL 1 (best) BASIC25.66■■□□□ 1.7
Smc1bQ920F6 Snx21-203ENSMUST00000152471 1243 ntTSL 1 (best) BASIC25.65■■□□□ 1.7
Smc1bQ920F6 Asph-201ENSMUST00000038564 1174 ntTSL 1 (best) BASIC25.65■■□□□ 1.7
Smc1bQ920F6 Asph-205ENSMUST00000098275 1007 ntTSL 5 BASIC25.65■■□□□ 1.7
Smc1bQ920F6 Ccdc136-206ENSMUST00000145310 1703 ntAPPRIS ALT2 TSL 5 BASIC25.64■■□□□ 1.7
Smc1bQ920F6 Nkx2-4-201ENSMUST00000067020 1725 ntAPPRIS P1 TSL 1 (best) BASIC25.64■■□□□ 1.7
Smc1bQ920F6 Gm6217-201ENSMUST00000222182 829 ntAPPRIS P1 BASIC25.64■■□□□ 1.7
Smc1bQ920F6 Thra-202ENSMUST00000103139 2246 ntAPPRIS P1 TSL 1 (best) BASIC25.64■■□□□ 1.69
Smc1bQ920F6 Ablim1-208ENSMUST00000111544 2231 ntTSL 5 BASIC25.64■■□□□ 1.69
Smc1bQ920F6 Syce3-201ENSMUST00000109314 448 ntAPPRIS P1 TSL 1 (best) BASIC25.63■■□□□ 1.69
Smc1bQ920F6 Socs2-202ENSMUST00000119917 948 ntAPPRIS P1 TSL 1 (best) BASIC25.63■■□□□ 1.69
Smc1bQ920F6 Gm15820-201ENSMUST00000201566 728 ntBASIC25.63■■□□□ 1.69
Smc1bQ920F6 Lsm4-205ENSMUST00000210987 636 ntTSL 5 BASIC25.63■■□□□ 1.69
Smc1bQ920F6 Pcsk1n-201ENSMUST00000041096 2193 ntAPPRIS P1 TSL 1 (best) BASIC25.63■■□□□ 1.69
Smc1bQ920F6 Onecut3-201ENSMUST00000051773 4776 ntAPPRIS P1 TSL 1 (best) BASIC25.63■■□□□ 1.69
Smc1bQ920F6 Gm20458-201ENSMUST00000164863 1369 ntAPPRIS P1 TSL 5 BASIC25.62■■□□□ 1.69
Smc1bQ920F6 A930002H24Rik-201ENSMUST00000050753 492 ntAPPRIS P1 BASIC25.62■■□□□ 1.69
Smc1bQ920F6 Fam50b-202ENSMUST00000221037 1345 ntAPPRIS P1 TSL 1 (best) BASIC25.62■■□□□ 1.69
Smc1bQ920F6 Qk-202ENSMUST00000097414 4658 ntAPPRIS P1 TSL 1 (best) BASIC25.61■■□□□ 1.69
Smc1bQ920F6 Htatsf1-202ENSMUST00000114751 1128 ntTSL 1 (best) BASIC25.61■■□□□ 1.69
Smc1bQ920F6 B4galt2-201ENSMUST00000030266 2312 ntAPPRIS P1 TSL 1 (best) BASIC25.6■■□□□ 1.69
Smc1bQ920F6 Syce2-202ENSMUST00000136026 1686 ntAPPRIS P3 TSL 1 (best) BASIC25.59■■□□□ 1.69
Smc1bQ920F6 Tead1-203ENSMUST00000084705 2543 ntAPPRIS ALT1 TSL 1 (best) BASIC25.59■■□□□ 1.69
Smc1bQ920F6 Nudt3-203ENSMUST00000114886 996 ntTSL 2 BASIC25.59■■□□□ 1.69
Smc1bQ920F6 Mpv17l2-201ENSMUST00000038626 980 ntAPPRIS P1 TSL 1 (best) BASIC25.59■■□□□ 1.69
Smc1bQ920F6 Deaf1-201ENSMUST00000080553 2135 ntAPPRIS P1 TSL 1 (best) BASIC25.58■■□□□ 1.69
Smc1bQ920F6 Olfm1-201ENSMUST00000028177 2757 ntAPPRIS P1 TSL 1 (best) BASIC25.58■■□□□ 1.69
Smc1bQ920F6 2510039O18Rik-201ENSMUST00000103232 2731 ntAPPRIS P1 TSL 1 (best) BASIC25.58■■□□□ 1.69
Smc1bQ920F6 Nelfe-201ENSMUST00000097343 1607 ntAPPRIS P1 TSL 5 BASIC25.58■■□□□ 1.69
Smc1bQ920F6 Srcap-211ENSMUST00000189136 1960 ntTSL 1 (best) BASIC25.58■■□□□ 1.69
Smc1bQ920F6 Jmy-202ENSMUST00000220513 1843 ntTSL 1 (best) BASIC25.58■■□□□ 1.68
Smc1bQ920F6 Mapk1-203ENSMUST00000115731 1747 ntAPPRIS P1 TSL 1 (best) BASIC25.57■■□□□ 1.68
Smc1bQ920F6 Cadps-201ENSMUST00000067491 5421 ntAPPRIS P4 TSL 1 (best) BASIC25.57■■□□□ 1.68
Smc1bQ920F6 Dnpep-201ENSMUST00000066668 2488 ntAPPRIS P3 TSL 1 (best) BASIC25.57■■□□□ 1.68
Smc1bQ920F6 D030046N08Rik-201ENSMUST00000162318 1570 ntTSL 1 (best) BASIC25.56■■□□□ 1.68
Smc1bQ920F6 Zc3h6-201ENSMUST00000110319 1484 ntTSL 1 (best) BASIC25.56■■□□□ 1.68
Smc1bQ920F6 Gemin7-203ENSMUST00000119912 653 ntAPPRIS P1 TSL 3 BASIC25.56■■□□□ 1.68
Smc1bQ920F6 1700097N02Rik-201ENSMUST00000188852 845 ntTSL 3 BASIC25.56■■□□□ 1.68
Smc1bQ920F6 Gm45102-201ENSMUST00000207427 857 ntBASIC25.56■■□□□ 1.68
Smc1bQ920F6 Gm10645-201ENSMUST00000098605 1090 ntAPPRIS P1 BASIC25.56■■□□□ 1.68
Smc1bQ920F6 Cited2-201ENSMUST00000038107 1979 ntAPPRIS P1 TSL 1 (best) BASIC25.55■■□□□ 1.68
Smc1bQ920F6 Gm43566-201ENSMUST00000196851 808 ntBASIC25.55■■□□□ 1.68
Smc1bQ920F6 Ccsap-201ENSMUST00000034452 2390 ntAPPRIS P1 TSL 1 (best) BASIC25.55■■□□□ 1.68
Smc1bQ920F6 Hrasls-204ENSMUST00000162747 854 ntAPPRIS P1 TSL 1 (best) BASIC25.54■■□□□ 1.68
Smc1bQ920F6 Camsap1-212ENSMUST00000183461 5090 ntAPPRIS ALT2 TSL 5 BASIC25.54■■□□□ 1.68
Smc1bQ920F6 Homer3-201ENSMUST00000003669 2323 ntAPPRIS ALT1 TSL 1 (best) BASIC25.53■■□□□ 1.68
Smc1bQ920F6 0610009L18Rik-201ENSMUST00000143813 619 ntTSL 2 BASIC25.53■■□□□ 1.68
Smc1bQ920F6 Kcnc3-206ENSMUST00000208651 2728 ntAPPRIS ALT2 TSL 5 BASIC25.53■■□□□ 1.68
Retrieved 100 of 76,532 protein–RNA pairs in 9.6 ms