Protein–RNA interactions for Protein: Q91Y02

Pcdhb18, Protocadherin beta-18, mousemouse

Predictions only

Length 792 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdhb18Q91Y02 Ssbp4-205ENSMUST00000210369 1828 ntTSL 2 BASIC23.64■■□□□ 1.38
Pcdhb18Q91Y02 Ei24-202ENSMUST00000163192 2309 ntAPPRIS P1 TSL 1 (best) BASIC23.64■■□□□ 1.38
Pcdhb18Q91Y02 Faim-202ENSMUST00000112911 803 ntAPPRIS ALT1 TSL 2 BASIC23.64■■□□□ 1.37
Pcdhb18Q91Y02 Gal3st1-202ENSMUST00000078757 1749 ntAPPRIS P1 TSL 1 (best) BASIC23.64■■□□□ 1.37
Pcdhb18Q91Y02 Gm7276-201ENSMUST00000097520 1252 ntAPPRIS P1 BASIC23.63■■□□□ 1.37
Pcdhb18Q91Y02 Etfa-201ENSMUST00000034866 1392 ntAPPRIS P1 TSL 1 (best) BASIC23.63■■□□□ 1.37
Pcdhb18Q91Y02 Crls1-201ENSMUST00000028835 1924 ntAPPRIS P1 TSL 1 (best) BASIC23.63■■□□□ 1.37
Pcdhb18Q91Y02 Jmy-202ENSMUST00000220513 1843 ntTSL 1 (best) BASIC23.62■■□□□ 1.37
Pcdhb18Q91Y02 Htatsf1-202ENSMUST00000114751 1128 ntTSL 1 (best) BASIC23.62■■□□□ 1.37
Pcdhb18Q91Y02 Gipc1-201ENSMUST00000019577 1522 ntAPPRIS P1 TSL 1 (best) BASIC23.62■■□□□ 1.37
Pcdhb18Q91Y02 Scrt2-201ENSMUST00000064061 3395 ntAPPRIS P1 TSL 5 BASIC23.62■■□□□ 1.37
Pcdhb18Q91Y02 Tm2d2-201ENSMUST00000033961 1281 ntAPPRIS P1 TSL 1 (best) BASIC23.61■■□□□ 1.37
Pcdhb18Q91Y02 Gm5812-201ENSMUST00000061073 957 ntBASIC23.61■■□□□ 1.37
Pcdhb18Q91Y02 Eya2-202ENSMUST00000088132 2447 ntAPPRIS P1 TSL 1 (best) BASIC23.61■■□□□ 1.37
Pcdhb18Q91Y02 Nudt3-203ENSMUST00000114886 996 ntTSL 2 BASIC23.6■■□□□ 1.37
Pcdhb18Q91Y02 Neurl1b-202ENSMUST00000182897 1231 ntTSL 5 BASIC23.6■■□□□ 1.37
Pcdhb18Q91Y02 Paqr3-202ENSMUST00000112968 1875 ntTSL 1 (best) BASIC23.6■■□□□ 1.37
Pcdhb18Q91Y02 Fzd9-201ENSMUST00000062572 2293 ntAPPRIS P1 BASIC23.59■■□□□ 1.37
Pcdhb18Q91Y02 5031425E22Rik-201ENSMUST00000101522 2110 ntBASIC23.59■■□□□ 1.37
Pcdhb18Q91Y02 Fam89b-203ENSMUST00000161368 1160 ntTSL 1 (best) BASIC23.59■■□□□ 1.37
Pcdhb18Q91Y02 Psip1-203ENSMUST00000107215 1898 ntTSL 1 (best) BASIC23.59■■□□□ 1.37
Pcdhb18Q91Y02 Gm4419-202ENSMUST00000226239 1431 ntBASIC23.59■■□□□ 1.37
Pcdhb18Q91Y02 Csnk1g2-201ENSMUST00000079773 2348 ntTSL 1 (best) BASIC23.58■■□□□ 1.37
Pcdhb18Q91Y02 Sec24d-208ENSMUST00000200333 307 ntTSL 1 (best) BASIC23.58■■□□□ 1.37
Pcdhb18Q91Y02 Gm21989-201ENSMUST00000174530 1609 ntTSL 1 (best) BASIC23.58■■□□□ 1.36
Pcdhb18Q91Y02 Gfra4-206ENSMUST00000110240 1426 ntAPPRIS ALT2 TSL 1 (best) BASIC23.58■■□□□ 1.36
Pcdhb18Q91Y02 Pxmp2-201ENSMUST00000031472 1041 ntAPPRIS P1 TSL 1 (best) BASIC23.57■■□□□ 1.36
Pcdhb18Q91Y02 Hopx-203ENSMUST00000120827 1217 ntAPPRIS P1 TSL 1 (best) BASIC23.56■■□□□ 1.36
Pcdhb18Q91Y02 Six3-201ENSMUST00000162695 2838 ntAPPRIS ALT2 TSL 5 BASIC23.56■■□□□ 1.36
Pcdhb18Q91Y02 Tirap-205ENSMUST00000176685 1783 ntAPPRIS P1 TSL 1 (best) BASIC23.55■■□□□ 1.36
Pcdhb18Q91Y02 Pdcd4-203ENSMUST00000165617 1806 ntAPPRIS P1 TSL 1 (best) BASIC23.55■■□□□ 1.36
Pcdhb18Q91Y02 Hnrnpul1-202ENSMUST00000108401 1240 ntTSL 1 (best) BASIC23.55■■□□□ 1.36
Pcdhb18Q91Y02 Acvr2b-201ENSMUST00000035093 1729 ntTSL 5 BASIC23.55■■□□□ 1.36
Pcdhb18Q91Y02 Gm15688-201ENSMUST00000161394 2418 ntTSL 1 (best) BASIC23.54■■□□□ 1.36
Pcdhb18Q91Y02 Suv39h2-202ENSMUST00000060618 1831 ntTSL 1 (best) BASIC23.54■■□□□ 1.36
Pcdhb18Q91Y02 Becn1-216ENSMUST00000170502 725 ntTSL 1 (best) BASIC23.54■■□□□ 1.36
Pcdhb18Q91Y02 H2-Q5-202ENSMUST00000172979 998 ntAPPRIS P1 TSL 5 BASIC23.54■■□□□ 1.36
Pcdhb18Q91Y02 Tmem42-201ENSMUST00000084733 1041 ntAPPRIS P1 TSL 1 (best) BASIC23.54■■□□□ 1.36
Pcdhb18Q91Y02 Sox3-201ENSMUST00000135107 2065 ntAPPRIS P1 BASIC23.54■■□□□ 1.36
Pcdhb18Q91Y02 Kctd2-201ENSMUST00000103035 1764 ntAPPRIS P1 TSL 1 (best) BASIC23.54■■□□□ 1.36
Pcdhb18Q91Y02 D17Wsu92e-201ENSMUST00000075076 1470 ntTSL 1 (best) BASIC23.54■■□□□ 1.36
Pcdhb18Q91Y02 Oaz2-206ENSMUST00000153700 1843 ntAPPRIS P2 TSL 5 BASIC23.54■■□□□ 1.36
Pcdhb18Q91Y02 Ints11-202ENSMUST00000120794 1884 ntTSL 5 BASIC23.53■■□□□ 1.36
Pcdhb18Q91Y02 Tmem127-202ENSMUST00000174288 842 ntTSL 2 BASIC23.53■■□□□ 1.36
Pcdhb18Q91Y02 AC161180.1-201ENSMUST00000223439 933 ntAPPRIS P1 BASIC23.53■■□□□ 1.36
Pcdhb18Q91Y02 Usf1-210ENSMUST00000167546 1822 ntAPPRIS P1 TSL 5 BASIC23.52■■□□□ 1.36
Pcdhb18Q91Y02 Mast2-203ENSMUST00000106485 5705 ntAPPRIS ALT2 TSL 1 (best) BASIC23.52■■□□□ 1.36
Pcdhb18Q91Y02 Mast2-204ENSMUST00000106486 5723 ntAPPRIS P4 TSL 1 (best) BASIC23.52■■□□□ 1.36
Pcdhb18Q91Y02 Fam50b-202ENSMUST00000221037 1345 ntAPPRIS P1 TSL 1 (best) BASIC23.52■■□□□ 1.36
Pcdhb18Q91Y02 Vdac1-202ENSMUST00000102758 2022 ntAPPRIS P1 TSL 1 (best) BASIC23.52■■□□□ 1.36
Pcdhb18Q91Y02 Agap3-201ENSMUST00000024123 3207 ntAPPRIS P1 TSL 1 (best) BASIC23.52■■□□□ 1.35
Pcdhb18Q91Y02 Mapkap1-202ENSMUST00000113124 1758 ntAPPRIS ALT1 TSL 5 BASIC23.51■■□□□ 1.35
Pcdhb18Q91Y02 Gxylt1-202ENSMUST00000057896 1891 ntAPPRIS ALT2 TSL 5 BASIC23.49■■□□□ 1.35
Pcdhb18Q91Y02 Gm29735-201ENSMUST00000209599 660 ntAPPRIS P1 BASIC23.49■■□□□ 1.35
Pcdhb18Q91Y02 H2afy-202ENSMUST00000045788 1933 ntTSL 1 (best) BASIC23.49■■□□□ 1.35
Pcdhb18Q91Y02 Zc3h6-201ENSMUST00000110319 1484 ntTSL 1 (best) BASIC23.49■■□□□ 1.35
Pcdhb18Q91Y02 Ipmk-203ENSMUST00000121446 1492 ntAPPRIS ALT2 TSL 5 BASIC23.48■■□□□ 1.35
Pcdhb18Q91Y02 Pura-201ENSMUST00000051301 3145 ntAPPRIS P1 TSL 1 (best) BASIC23.47■■□□□ 1.35
Pcdhb18Q91Y02 Frat2-201ENSMUST00000059231 2161 ntAPPRIS P1 BASIC23.47■■□□□ 1.35
Pcdhb18Q91Y02 Lsm4-201ENSMUST00000034311 925 ntAPPRIS P1 TSL 1 (best) BASIC23.47■■□□□ 1.35
Pcdhb18Q91Y02 Usp2-206ENSMUST00000176416 1486 ntAPPRIS ALT2 TSL 1 (best) BASIC23.47■■□□□ 1.35
Pcdhb18Q91Y02 Preb-209ENSMUST00000202567 1869 ntTSL 1 (best) BASIC23.47■■□□□ 1.35
Pcdhb18Q91Y02 Gm15546-201ENSMUST00000122095 826 ntBASIC23.46■■□□□ 1.35
Pcdhb18Q91Y02 Bag1-203ENSMUST00000191273 1348 ntAPPRIS ALT2 TSL 1 (best) BASIC23.46■■□□□ 1.35
Pcdhb18Q91Y02 Gm7544-201ENSMUST00000222426 828 ntAPPRIS P1 BASIC23.45■■□□□ 1.34
Pcdhb18Q91Y02 Hist2h3c1-201ENSMUST00000176059 1820 ntAPPRIS P1 BASIC23.45■■□□□ 1.34
Pcdhb18Q91Y02 Hist2h3c1-202ENSMUST00000177796 1825 ntBASIC23.45■■□□□ 1.34
Pcdhb18Q91Y02 Pde8b-204ENSMUST00000159608 2370 ntTSL 5 BASIC23.44■■□□□ 1.34
Pcdhb18Q91Y02 Thra-202ENSMUST00000103139 2246 ntAPPRIS P1 TSL 1 (best) BASIC23.44■■□□□ 1.34
Pcdhb18Q91Y02 Cyp2r1-202ENSMUST00000119712 917 ntTSL 5 BASIC23.44■■□□□ 1.34
Pcdhb18Q91Y02 Snx21-203ENSMUST00000152471 1243 ntTSL 1 (best) BASIC23.44■■□□□ 1.34
Pcdhb18Q91Y02 Dexi-201ENSMUST00000038281 1389 ntAPPRIS P1 TSL 1 (best) BASIC23.43■■□□□ 1.34
Pcdhb18Q91Y02 AC166358.2-201ENSMUST00000223403 734 ntTSL 5 BASIC23.43■■□□□ 1.34
Pcdhb18Q91Y02 Ntn5-203ENSMUST00000183120 1491 ntTSL 1 (best) BASIC23.43■■□□□ 1.34
Pcdhb18Q91Y02 Pdpk1-203ENSMUST00000115407 1730 ntTSL 5 BASIC23.42■■□□□ 1.34
Pcdhb18Q91Y02 Efcc1-202ENSMUST00000159570 2293 ntAPPRIS P2 TSL 5 BASIC23.42■■□□□ 1.34
Pcdhb18Q91Y02 Pdgfa-204ENSMUST00000110897 1287 ntAPPRIS P1 TSL 5 BASIC23.42■■□□□ 1.34
Pcdhb18Q91Y02 Gm2415-202ENSMUST00000134688 401 ntTSL 2 BASIC23.42■■□□□ 1.34
Pcdhb18Q91Y02 Gm12905-201ENSMUST00000153814 658 ntTSL 2 BASIC23.42■■□□□ 1.34
Pcdhb18Q91Y02 AC117769.4-201ENSMUST00000225679 685 ntBASIC23.42■■□□□ 1.34
Pcdhb18Q91Y02 Cdkn2c-202ENSMUST00000097921 2471 ntAPPRIS P1 TSL 1 (best) BASIC23.42■■□□□ 1.34
Pcdhb18Q91Y02 Eif5a-208ENSMUST00000108611 1353 ntAPPRIS P1 TSL 1 (best) BASIC23.41■■□□□ 1.34
Pcdhb18Q91Y02 Msto1-202ENSMUST00000126245 1875 ntAPPRIS P1 TSL 1 (best) BASIC23.41■■□□□ 1.34
Pcdhb18Q91Y02 Foxe3-201ENSMUST00000050940 867 ntAPPRIS P1 BASIC23.41■■□□□ 1.34
Pcdhb18Q91Y02 Nisch-222ENSMUST00000172142 2780 ntAPPRIS ALT2 TSL 1 (best) BASIC23.4■■□□□ 1.34
Pcdhb18Q91Y02 Gm43592-201ENSMUST00000196922 1165 ntBASIC23.4■■□□□ 1.34
Pcdhb18Q91Y02 Coprs-201ENSMUST00000033839 793 ntAPPRIS P1 TSL 1 (best) BASIC23.4■■□□□ 1.34
Pcdhb18Q91Y02 B230377A18Rik-202ENSMUST00000192921 1364 ntBASIC23.4■■□□□ 1.34
Pcdhb18Q91Y02 Gm6217-201ENSMUST00000222182 829 ntAPPRIS P1 BASIC23.39■■□□□ 1.33
Pcdhb18Q91Y02 Hras-202ENSMUST00000097957 1199 ntAPPRIS P1 TSL 2 BASIC23.39■■□□□ 1.33
Pcdhb18Q91Y02 Tmem70-203ENSMUST00000177501 1636 ntAPPRIS P3 TSL 1 (best) BASIC23.39■■□□□ 1.33
Pcdhb18Q91Y02 Kcnk2-205ENSMUST00000192723 1642 ntAPPRIS ALT1 TSL 1 (best) BASIC23.39■■□□□ 1.33
Pcdhb18Q91Y02 Runx2-211ENSMUST00000162629 1607 ntAPPRIS ALT2 TSL 5 BASIC23.38■■□□□ 1.33
Pcdhb18Q91Y02 Gm22567-201ENSMUST00000175542 342 ntBASIC23.38■■□□□ 1.33
Pcdhb18Q91Y02 Trappc6b-207ENSMUST00000218686 785 ntTSL 3 BASIC23.38■■□□□ 1.33
Pcdhb18Q91Y02 Mypop-201ENSMUST00000059331 2173 ntAPPRIS P1 TSL 5 BASIC23.38■■□□□ 1.33
Pcdhb18Q91Y02 Slc22a17-201ENSMUST00000050772 2290 ntTSL 1 (best) BASIC23.38■■□□□ 1.33
Pcdhb18Q91Y02 Tmem11-201ENSMUST00000062677 1457 ntAPPRIS P1 TSL 1 (best) BASIC23.37■■□□□ 1.33
Pcdhb18Q91Y02 Gm5522-201ENSMUST00000189483 1242 ntBASIC23.37■■□□□ 1.33
Pcdhb18Q91Y02 Dhrs11-201ENSMUST00000047560 1254 ntAPPRIS P1 TSL 1 (best) BASIC23.37■■□□□ 1.33
Retrieved 100 of 76,532 protein–RNA pairs in 130.6 ms