Protein–RNA interactions for Protein: Q8VIM6

Strc, Stereocilin, mousemouse

Predictions only

Length 1,809 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
StrcQ8VIM6 Gm37847-201ENSMUST00000192163 1497 ntBASIC28.1■■■□□ 2.09
StrcQ8VIM6 Gm31748-201ENSMUST00000194938 1497 ntBASIC28.1■■■□□ 2.09
StrcQ8VIM6 Gm13429-202ENSMUST00000128242 692 ntTSL 3 BASIC28.1■■■□□ 2.09
StrcQ8VIM6 Ap1ar-210ENSMUST00000200409 2580 ntTSL 5 BASIC28.09■■■□□ 2.09
StrcQ8VIM6 Dynlt1f-201ENSMUST00000179554 807 ntAPPRIS P1 TSL 1 (best) BASIC28.09■■■□□ 2.09
StrcQ8VIM6 Nenf-201ENSMUST00000046770 742 ntAPPRIS P1 TSL 1 (best) BASIC28.09■■■□□ 2.09
StrcQ8VIM6 Mpnd-209ENSMUST00000162883 1400 ntTSL 5 BASIC28.09■■■□□ 2.09
StrcQ8VIM6 Pi16-201ENSMUST00000114699 1243 ntAPPRIS ALT2 TSL 1 (best) BASIC28.08■■■□□ 2.09
StrcQ8VIM6 Hagh-201ENSMUST00000024974 1101 ntAPPRIS ALT1 TSL 5 BASIC28.08■■■□□ 2.09
StrcQ8VIM6 C1qtnf5-204ENSMUST00000114821 1365 ntAPPRIS P1 TSL 2 BASIC28.08■■■□□ 2.09
StrcQ8VIM6 Nrg3-202ENSMUST00000168810 2175 ntAPPRIS ALT2 TSL 1 (best) BASIC28.08■■■□□ 2.09
StrcQ8VIM6 Ramp1-202ENSMUST00000165855 852 ntTSL 2 BASIC28.07■■■□□ 2.08
StrcQ8VIM6 AC122379.1-201ENSMUST00000220658 355 ntTSL 3 BASIC28.07■■■□□ 2.08
StrcQ8VIM6 Gsk3a-201ENSMUST00000071739 2260 ntAPPRIS P2 TSL 2 BASIC28.07■■■□□ 2.08
StrcQ8VIM6 Ppia-202ENSMUST00000132846 1170 ntAPPRIS P1 TSL 1 (best) BASIC28.06■■■□□ 2.08
StrcQ8VIM6 Pgp-201ENSMUST00000053024 1027 ntAPPRIS P1 TSL 1 (best) BASIC28.06■■■□□ 2.08
StrcQ8VIM6 Bex1-201ENSMUST00000058125 866 ntAPPRIS P1 TSL 1 (best) BASIC28.06■■■□□ 2.08
StrcQ8VIM6 St7-202ENSMUST00000052113 2046 ntAPPRIS P1 TSL 1 (best) BASIC28.06■■■□□ 2.08
StrcQ8VIM6 4833418N17Rik-201ENSMUST00000064826 615 ntBASIC28.06■■■□□ 2.08
StrcQ8VIM6 Gal3st1-202ENSMUST00000078757 1749 ntAPPRIS P1 TSL 1 (best) BASIC28.05■■■□□ 2.08
StrcQ8VIM6 Fn1-208ENSMUST00000186940 1350 ntTSL 1 (best) BASIC28.05■■■□□ 2.08
StrcQ8VIM6 Smco4-203ENSMUST00000215907 994 ntAPPRIS P1 TSL 1 (best) BASIC28.05■■■□□ 2.08
StrcQ8VIM6 Fam96b-203ENSMUST00000164884 918 ntAPPRIS P1 TSL 1 (best) BASIC28.04■■■□□ 2.08
StrcQ8VIM6 Jmy-202ENSMUST00000220513 1843 ntTSL 1 (best) BASIC28.04■■■□□ 2.08
StrcQ8VIM6 Jmjd6-201ENSMUST00000047616 1668 ntAPPRIS P1 TSL 1 (best) BASIC28.04■■■□□ 2.08
StrcQ8VIM6 Det1-201ENSMUST00000032839 2269 ntAPPRIS P1 TSL 1 (best) BASIC28.03■■■□□ 2.08
StrcQ8VIM6 Tsg101-201ENSMUST00000014546 1949 ntAPPRIS P1 TSL 1 (best) BASIC28.03■■■□□ 2.08
StrcQ8VIM6 H2afy-202ENSMUST00000045788 1933 ntTSL 1 (best) BASIC28.03■■■□□ 2.08
StrcQ8VIM6 Mir155hg-202ENSMUST00000185662 1362 ntTSL 5 BASIC28.03■■■□□ 2.08
StrcQ8VIM6 Pfdn4-204ENSMUST00000109148 736 ntTSL 3 BASIC28.03■■■□□ 2.08
StrcQ8VIM6 Tfpt-204ENSMUST00000155592 1091 ntAPPRIS P3 TSL 1 (best) BASIC28.03■■■□□ 2.08
StrcQ8VIM6 1700065D16Rik-202ENSMUST00000188975 506 ntTSL 3 BASIC28.03■■■□□ 2.08
StrcQ8VIM6 Gm4419-202ENSMUST00000226239 1431 ntBASIC28.03■■■□□ 2.08
StrcQ8VIM6 Tlx2-201ENSMUST00000089641 1236 ntAPPRIS P1 TSL 1 (best) BASIC28.03■■■□□ 2.08
StrcQ8VIM6 Tmem11-201ENSMUST00000062677 1457 ntAPPRIS P1 TSL 1 (best) BASIC28.03■■■□□ 2.08
StrcQ8VIM6 4930524J08Rik-201ENSMUST00000046721 603 ntAPPRIS P1 BASIC28.02■■■□□ 2.08
StrcQ8VIM6 Nr2f6-201ENSMUST00000002466 2218 ntAPPRIS P1 TSL 1 (best) BASIC28.02■■■□□ 2.08
StrcQ8VIM6 Gm18755-201ENSMUST00000218030 1099 ntBASIC28.02■■■□□ 2.08
StrcQ8VIM6 Tmem55b-209ENSMUST00000162957 1465 ntTSL 1 (best) BASIC28.01■■■□□ 2.08
StrcQ8VIM6 Pdf-201ENSMUST00000055316 1306 ntAPPRIS P1 TSL 1 (best) BASIC28.01■■■□□ 2.07
StrcQ8VIM6 Gm42501-201ENSMUST00000200220 1026 ntBASIC28■■■□□ 2.07
StrcQ8VIM6 Gm35161-201ENSMUST00000221765 941 ntTSL 5 BASIC27.99■■■□□ 2.07
StrcQ8VIM6 Ccdc85c-201ENSMUST00000136175 1302 ntAPPRIS ALT2 TSL 5 BASIC27.99■■■□□ 2.07
StrcQ8VIM6 Sds-204ENSMUST00000201684 1288 ntAPPRIS P1 TSL 5 BASIC27.99■■■□□ 2.07
StrcQ8VIM6 Zbtb12-201ENSMUST00000052778 1858 ntAPPRIS P1 TSL 1 (best) BASIC27.99■■■□□ 2.07
StrcQ8VIM6 Rab40c-201ENSMUST00000026826 2466 ntAPPRIS P1 TSL 1 (best) BASIC27.99■■■□□ 2.07
StrcQ8VIM6 Gipc1-201ENSMUST00000019577 1522 ntAPPRIS P1 TSL 1 (best) BASIC27.98■■■□□ 2.07
StrcQ8VIM6 Susd3-203ENSMUST00000119721 1249 ntAPPRIS ALT2 TSL 1 (best) BASIC27.98■■■□□ 2.07
StrcQ8VIM6 Gm45095-201ENSMUST00000206736 254 ntTSL 5 BASIC27.98■■■□□ 2.07
StrcQ8VIM6 Scn1b-201ENSMUST00000098548 1573 ntAPPRIS P1 TSL 1 (best) BASIC27.97■■■□□ 2.07
StrcQ8VIM6 Fam92a-202ENSMUST00000108285 1639 ntAPPRIS P3 TSL 5 BASIC27.97■■■□□ 2.07
StrcQ8VIM6 Bcl7b-201ENSMUST00000031692 1758 ntAPPRIS P2 TSL 1 (best) BASIC27.97■■■□□ 2.07
StrcQ8VIM6 Hist2h3c1-201ENSMUST00000176059 1820 ntAPPRIS P1 BASIC27.97■■■□□ 2.07
StrcQ8VIM6 Hist2h3c1-202ENSMUST00000177796 1825 ntBASIC27.97■■■□□ 2.07
StrcQ8VIM6 Metrnl-201ENSMUST00000036742 1401 ntAPPRIS P2 TSL 1 (best) BASIC27.97■■■□□ 2.07
StrcQ8VIM6 Stk19-201ENSMUST00000077477 1120 ntAPPRIS P1 TSL 1 (best) BASIC27.97■■■□□ 2.07
StrcQ8VIM6 Sac3d1-201ENSMUST00000113533 1374 ntAPPRIS P1 TSL 1 (best) BASIC27.96■■■□□ 2.07
StrcQ8VIM6 Runx2-211ENSMUST00000162629 1607 ntAPPRIS ALT2 TSL 5 BASIC27.96■■■□□ 2.07
StrcQ8VIM6 Hmg20b-203ENSMUST00000105324 1540 ntAPPRIS P1 TSL 1 (best) BASIC27.96■■■□□ 2.07
StrcQ8VIM6 Sox17-202ENSMUST00000116652 1512 ntAPPRIS P1 TSL 1 (best) BASIC27.96■■■□□ 2.07
StrcQ8VIM6 Irx4-201ENSMUST00000022095 2589 ntAPPRIS P1 TSL 1 (best) BASIC27.95■■■□□ 2.07
StrcQ8VIM6 Vcpkmt-201ENSMUST00000058639 1027 ntAPPRIS P1 TSL 1 (best) BASIC27.95■■■□□ 2.07
StrcQ8VIM6 Fgf16-201ENSMUST00000033581 1645 ntAPPRIS P1 TSL 1 (best) BASIC27.95■■■□□ 2.06
StrcQ8VIM6 Gm10837-201ENSMUST00000100294 1536 ntAPPRIS P1 BASIC27.95■■■□□ 2.06
StrcQ8VIM6 Acad9-205ENSMUST00000196648 552 ntTSL 3 BASIC27.95■■■□□ 2.06
StrcQ8VIM6 Ubl7-208ENSMUST00000216841 1426 ntAPPRIS P1 TSL 5 BASIC27.94■■■□□ 2.06
StrcQ8VIM6 Ndfip1-201ENSMUST00000025293 930 ntAPPRIS P1 TSL 1 (best) BASIC27.94■■■□□ 2.06
StrcQ8VIM6 Wdr34-201ENSMUST00000113711 1814 ntAPPRIS P1 TSL 1 (best) BASIC27.93■■■□□ 2.06
StrcQ8VIM6 Ablim1-208ENSMUST00000111544 2231 ntTSL 5 BASIC27.92■■■□□ 2.06
StrcQ8VIM6 St3gal5-201ENSMUST00000069994 2258 ntAPPRIS P3 TSL 1 (best) BASIC27.92■■■□□ 2.06
StrcQ8VIM6 Hoxb3os-202ENSMUST00000147410 1945 ntTSL 5 BASIC27.91■■■□□ 2.06
StrcQ8VIM6 Ltb-203ENSMUST00000173600 905 ntAPPRIS ALT2 TSL 5 BASIC27.91■■■□□ 2.06
StrcQ8VIM6 Copz2-201ENSMUST00000018816 930 ntAPPRIS P1 TSL 1 (best) BASIC27.91■■■□□ 2.06
StrcQ8VIM6 Ssbp1-203ENSMUST00000117411 933 ntAPPRIS P1 TSL 1 (best) BASIC27.9■■■□□ 2.06
StrcQ8VIM6 AC117245.1-201ENSMUST00000215481 566 ntTSL 3 BASIC27.9■■■□□ 2.06
StrcQ8VIM6 Gadd45g-201ENSMUST00000021903 1071 ntAPPRIS P1 TSL 1 (best) BASIC27.89■■■□□ 2.06
StrcQ8VIM6 Pdcd4-203ENSMUST00000165617 1806 ntAPPRIS P1 TSL 1 (best) BASIC27.89■■■□□ 2.06
StrcQ8VIM6 Pdss1-207ENSMUST00000152170 1538 ntTSL 1 (best) BASIC27.89■■■□□ 2.05
StrcQ8VIM6 Micu3-201ENSMUST00000068999 2219 ntAPPRIS P1 TSL 5 BASIC27.88■■■□□ 2.05
StrcQ8VIM6 A430027H14Rik-201ENSMUST00000191809 1467 ntBASIC27.88■■■□□ 2.05
StrcQ8VIM6 Etfa-201ENSMUST00000034866 1392 ntAPPRIS P1 TSL 1 (best) BASIC27.88■■■□□ 2.05
StrcQ8VIM6 B230377A18Rik-202ENSMUST00000192921 1364 ntBASIC27.87■■■□□ 2.05
StrcQ8VIM6 Cldnd1-204ENSMUST00000162057 1540 ntAPPRIS P1 TSL 5 BASIC27.87■■■□□ 2.05
StrcQ8VIM6 Naxd-202ENSMUST00000177955 1307 ntAPPRIS P1 TSL 1 (best) BASIC27.87■■■□□ 2.05
StrcQ8VIM6 Tmem106c-201ENSMUST00000064200 1635 ntAPPRIS P1 TSL 1 (best) BASIC27.86■■■□□ 2.05
StrcQ8VIM6 Rabac1-201ENSMUST00000076961 899 ntAPPRIS P1 TSL 1 (best) BASIC27.86■■■□□ 2.05
StrcQ8VIM6 Dleu2-201ENSMUST00000180377 1165 ntTSL 1 (best) BASIC27.85■■■□□ 2.05
StrcQ8VIM6 Ccdc84-212ENSMUST00000217351 888 ntTSL 3 BASIC27.85■■■□□ 2.05
StrcQ8VIM6 Spata6-213ENSMUST00000153746 1444 ntTSL 1 (best) BASIC27.85■■■□□ 2.05
StrcQ8VIM6 Marcksl1-201ENSMUST00000062356 1605 ntAPPRIS P1 TSL 1 (best) BASIC27.85■■■□□ 2.05
StrcQ8VIM6 Tmem196-202ENSMUST00000183694 845 ntTSL 3 BASIC27.85■■■□□ 2.05
StrcQ8VIM6 Rap1a-202ENSMUST00000197094 782 ntTSL 3 BASIC27.85■■■□□ 2.05
StrcQ8VIM6 Slc37a3-211ENSMUST00000202749 434 ntTSL 5 BASIC27.85■■■□□ 2.05
StrcQ8VIM6 Gm10232-201ENSMUST00000089221 720 ntBASIC27.85■■■□□ 2.05
StrcQ8VIM6 Mpp6-203ENSMUST00000166318 2222 ntTSL 1 (best) BASIC27.84■■■□□ 2.05
StrcQ8VIM6 Txnrd2-201ENSMUST00000115604 1235 ntTSL 1 (best) BASIC27.84■■■□□ 2.05
StrcQ8VIM6 Ost4-202ENSMUST00000132253 1144 ntAPPRIS P1 TSL 1 (best) BASIC27.84■■■□□ 2.05
StrcQ8VIM6 Ssbp4-205ENSMUST00000210369 1828 ntTSL 2 BASIC27.84■■■□□ 2.05
StrcQ8VIM6 Eif5a-210ENSMUST00000108613 1343 ntAPPRIS P1 TSL 1 (best) BASIC27.84■■■□□ 2.05
StrcQ8VIM6 Gm2415-201ENSMUST00000128982 1474 ntTSL 1 (best) BASIC27.83■■■□□ 2.05
Retrieved 100 of 76,532 protein–RNA pairs in 39.5 ms