Protein–RNA interactions for Protein: Q8VHR0

Pcdh18, Protocadherin 18, mousemouse

Predictions only

Length 1,134 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdh18Q8VHR0 Dyrk1b-201ENSMUST00000085901 2534 ntAPPRIS P3 TSL 1 (best) BASIC21.56■■□□□ 1.04
Pcdh18Q8VHR0 Efcc1-201ENSMUST00000032132 2729 ntAPPRIS ALT2 TSL 5 BASIC21.56■■□□□ 1.04
Pcdh18Q8VHR0 Rpl19-ps4-201ENSMUST00000167150 625 ntBASIC21.56■■□□□ 1.04
Pcdh18Q8VHR0 Phox2a-201ENSMUST00000008090 1609 ntAPPRIS P1 TSL 1 (best) BASIC21.55■■□□□ 1.04
Pcdh18Q8VHR0 Cops6-202ENSMUST00000110951 1098 ntAPPRIS ALT2 TSL 1 (best) BASIC21.55■■□□□ 1.04
Pcdh18Q8VHR0 Slc16a11-211ENSMUST00000171032 1754 ntAPPRIS P1 TSL 5 BASIC21.55■■□□□ 1.04
Pcdh18Q8VHR0 Slc35f5-201ENSMUST00000027580 2733 ntAPPRIS P1 TSL 1 (best) BASIC21.54■■□□□ 1.04
Pcdh18Q8VHR0 Ccna1-202ENSMUST00000197238 1719 ntAPPRIS P1 TSL 5 BASIC21.54■■□□□ 1.04
Pcdh18Q8VHR0 Ppp4c-211ENSMUST00000206570 1400 ntAPPRIS P1 TSL 1 (best) BASIC21.54■■□□□ 1.04
Pcdh18Q8VHR0 Zfp523-202ENSMUST00000073534 2654 ntAPPRIS P1 TSL 5 BASIC21.53■■□□□ 1.04
Pcdh18Q8VHR0 Lrrc1-205ENSMUST00000183873 3121 ntAPPRIS P1 TSL 1 (best) BASIC21.53■■□□□ 1.04
Pcdh18Q8VHR0 Ezh2-201ENSMUST00000081721 2787 ntAPPRIS P2 TSL 1 (best) BASIC21.53■■□□□ 1.04
Pcdh18Q8VHR0 Endog-201ENSMUST00000015481 1063 ntAPPRIS P1 TSL 1 (best) BASIC21.53■■□□□ 1.04
Pcdh18Q8VHR0 A330023F24Rik-201ENSMUST00000181226 955 ntTSL 1 (best) BASIC21.53■■□□□ 1.04
Pcdh18Q8VHR0 Mtf2-202ENSMUST00000112626 1968 ntTSL 5 BASIC21.53■■□□□ 1.04
Pcdh18Q8VHR0 Pex10-201ENSMUST00000103180 1688 ntAPPRIS P1 TSL 1 (best) BASIC21.53■■□□□ 1.04
Pcdh18Q8VHR0 Pde8b-204ENSMUST00000159608 2370 ntTSL 5 BASIC21.52■■□□□ 1.04
Pcdh18Q8VHR0 4931440P22Rik-201ENSMUST00000099076 1786 ntTSL 1 (best) BASIC21.51■■□□□ 1.03
Pcdh18Q8VHR0 Tsen34-203ENSMUST00000108629 1238 ntTSL 1 (best) BASIC21.51■■□□□ 1.03
Pcdh18Q8VHR0 BC037034-201ENSMUST00000048421 2490 ntAPPRIS P1 TSL 1 (best) BASIC21.51■■□□□ 1.03
Pcdh18Q8VHR0 Tirap-205ENSMUST00000176685 1783 ntAPPRIS P1 TSL 1 (best) BASIC21.51■■□□□ 1.03
Pcdh18Q8VHR0 Hibadh-201ENSMUST00000031788 1825 ntAPPRIS P1 TSL 1 (best) BASIC21.5■■□□□ 1.03
Pcdh18Q8VHR0 Stac-201ENSMUST00000035083 2644 ntAPPRIS P1 TSL 1 (best) BASIC21.5■■□□□ 1.03
Pcdh18Q8VHR0 Ccdc122-201ENSMUST00000048208 1721 ntAPPRIS P3 TSL 1 (best) BASIC21.5■■□□□ 1.03
Pcdh18Q8VHR0 Pan3-201ENSMUST00000031651 5048 ntAPPRIS P2 TSL 5 BASIC21.5■■□□□ 1.03
Pcdh18Q8VHR0 E130309D02Rik-201ENSMUST00000046418 2208 ntAPPRIS P1 TSL 1 (best) BASIC21.5■■□□□ 1.03
Pcdh18Q8VHR0 Ppp1r14b-201ENSMUST00000070850 919 ntAPPRIS P1 TSL 1 (best) BASIC21.5■■□□□ 1.03
Pcdh18Q8VHR0 Scarb1-202ENSMUST00000111390 2367 ntTSL 1 (best) BASIC21.5■■□□□ 1.03
Pcdh18Q8VHR0 Lrrc14-201ENSMUST00000036423 2093 ntAPPRIS P1 TSL 1 (best) BASIC21.49■■□□□ 1.03
Pcdh18Q8VHR0 Strn3-201ENSMUST00000013130 3046 ntAPPRIS P1 TSL 1 (best) BASIC21.49■■□□□ 1.03
Pcdh18Q8VHR0 Cacnb3-202ENSMUST00000109150 2670 ntTSL 5 BASIC21.49■■□□□ 1.03
Pcdh18Q8VHR0 Zgpat-202ENSMUST00000108807 2072 ntAPPRIS P1 TSL 1 (best) BASIC21.49■■□□□ 1.03
Pcdh18Q8VHR0 Fance-203ENSMUST00000114803 1980 ntTSL 1 (best) BASIC21.48■■□□□ 1.03
Pcdh18Q8VHR0 Osbpl2-201ENSMUST00000040668 2805 ntAPPRIS P1 TSL 1 (best) BASIC21.48■■□□□ 1.03
Pcdh18Q8VHR0 Banp-202ENSMUST00000093078 2289 ntTSL 1 (best) BASIC21.48■■□□□ 1.03
Pcdh18Q8VHR0 Gm37847-201ENSMUST00000192163 1497 ntBASIC21.48■■□□□ 1.03
Pcdh18Q8VHR0 Gm31748-201ENSMUST00000194938 1497 ntBASIC21.48■■□□□ 1.03
Pcdh18Q8VHR0 Spg7-201ENSMUST00000108868 845 ntTSL 2 BASIC21.48■■□□□ 1.03
Pcdh18Q8VHR0 Dyrk1b-202ENSMUST00000172467 2523 ntTSL 1 (best) BASIC21.48■■□□□ 1.03
Pcdh18Q8VHR0 Susd6-203ENSMUST00000220238 2127 ntAPPRIS ALT2 TSL 1 (best) BASIC21.47■■□□□ 1.03
Pcdh18Q8VHR0 Dgat2-201ENSMUST00000033001 2262 ntAPPRIS P1 TSL 1 (best) BASIC21.47■■□□□ 1.03
Pcdh18Q8VHR0 Tsen34-204ENSMUST00000108630 1779 ntTSL 1 (best) BASIC21.47■■□□□ 1.03
Pcdh18Q8VHR0 Atpaf1-203ENSMUST00000176047 2330 ntAPPRIS P1 TSL 1 (best) BASIC21.47■■□□□ 1.03
Pcdh18Q8VHR0 Ankrd60-202ENSMUST00000119453 1084 ntAPPRIS P2 TSL 2 BASIC21.46■■□□□ 1.03
Pcdh18Q8VHR0 Mxi1-202ENSMUST00000025998 4996 ntAPPRIS P1 TSL 1 (best) BASIC21.46■■□□□ 1.03
Pcdh18Q8VHR0 Cadm1-209ENSMUST00000152459 1784 ntTSL 1 (best) BASIC21.46■■□□□ 1.03
Pcdh18Q8VHR0 Rbmxl2-201ENSMUST00000098135 1472 ntAPPRIS P1 BASIC21.45■■□□□ 1.03
Pcdh18Q8VHR0 Usp39-201ENSMUST00000070345 2244 ntAPPRIS P1 TSL 1 (best) BASIC21.45■■□□□ 1.03
Pcdh18Q8VHR0 Trpc1-201ENSMUST00000053785 2912 ntAPPRIS ALT2 TSL 1 (best) BASIC21.45■■□□□ 1.02
Pcdh18Q8VHR0 Scx-201ENSMUST00000043089 1136 ntAPPRIS P1 TSL 1 (best) BASIC21.45■■□□□ 1.02
Pcdh18Q8VHR0 Fezf2-201ENSMUST00000022262 2188 ntAPPRIS P1 TSL 1 (best) BASIC21.45■■□□□ 1.02
Pcdh18Q8VHR0 Thra-201ENSMUST00000064187 2452 ntTSL 1 (best) BASIC21.45■■□□□ 1.02
Pcdh18Q8VHR0 Pim3-201ENSMUST00000042818 2419 ntAPPRIS P1 TSL 1 (best) BASIC21.44■■□□□ 1.02
Pcdh18Q8VHR0 Cetn4-202ENSMUST00000075537 762 ntTSL 3 BASIC21.44■■□□□ 1.02
Pcdh18Q8VHR0 Nkain2-201ENSMUST00000092602 558 ntBASIC21.44■■□□□ 1.02
Pcdh18Q8VHR0 Sft2d3-201ENSMUST00000054984 2810 ntAPPRIS P1 BASIC21.44■■□□□ 1.02
Pcdh18Q8VHR0 Ewsr1-205ENSMUST00000102930 2174 ntAPPRIS ALT2 TSL 5 BASIC21.44■■□□□ 1.02
Pcdh18Q8VHR0 Esrra-201ENSMUST00000025906 2242 ntAPPRIS P1 TSL 1 (best) BASIC21.44■■□□□ 1.02
Pcdh18Q8VHR0 Bod1-202ENSMUST00000109415 799 ntAPPRIS P1 TSL 2 BASIC21.43■■□□□ 1.02
Pcdh18Q8VHR0 AC163623.1-201ENSMUST00000213738 727 ntAPPRIS P1 TSL 3 BASIC21.43■■□□□ 1.02
Pcdh18Q8VHR0 Pm20d2-202ENSMUST00000119167 1339 ntTSL 1 (best) BASIC21.43■■□□□ 1.02
Pcdh18Q8VHR0 Nisch-201ENSMUST00000022469 5559 ntAPPRIS P3 TSL 2 BASIC21.43■■□□□ 1.02
Pcdh18Q8VHR0 Particl-201ENSMUST00000205370 1560 ntBASIC21.43■■□□□ 1.02
Pcdh18Q8VHR0 Phf2-201ENSMUST00000035540 5494 ntAPPRIS P1 TSL 1 (best) BASIC21.42■■□□□ 1.02
Pcdh18Q8VHR0 Eml2-202ENSMUST00000117338 2765 ntAPPRIS ALT2 TSL 5 BASIC21.42■■□□□ 1.02
Pcdh18Q8VHR0 Socs2-213ENSMUST00000170690 2195 ntAPPRIS P1 TSL 3 BASIC21.42■■□□□ 1.02
Pcdh18Q8VHR0 Suds3-201ENSMUST00000086471 2425 ntAPPRIS P3 TSL 1 (best) BASIC21.42■■□□□ 1.02
Pcdh18Q8VHR0 Pou6f1-202ENSMUST00000073837 4953 ntTSL 1 (best) BASIC21.42■■□□□ 1.02
Pcdh18Q8VHR0 Rhbdl1-201ENSMUST00000026831 1711 ntAPPRIS P1 TSL 1 (best) BASIC21.41■■□□□ 1.02
Pcdh18Q8VHR0 Adprhl2-201ENSMUST00000102617 1672 ntAPPRIS P1 TSL 1 (best) BASIC21.41■■□□□ 1.02
Pcdh18Q8VHR0 Dnttip1-201ENSMUST00000017443 1664 ntAPPRIS P1 TSL 1 (best) BASIC21.41■■□□□ 1.02
Pcdh18Q8VHR0 Pradc1-201ENSMUST00000032080 1038 ntAPPRIS P1 TSL 1 (best) BASIC21.41■■□□□ 1.02
Pcdh18Q8VHR0 Dnajb2-202ENSMUST00000082158 1253 ntAPPRIS P1 TSL 5 BASIC21.41■■□□□ 1.02
Pcdh18Q8VHR0 Fbxl3-204ENSMUST00000132004 2534 ntTSL 1 (best) BASIC21.41■■□□□ 1.02
Pcdh18Q8VHR0 Wtap-204ENSMUST00000159986 3187 ntTSL 1 (best) BASIC21.41■■□□□ 1.02
Pcdh18Q8VHR0 Tspan33-202ENSMUST00000115250 1977 ntAPPRIS ALT1 TSL 1 (best) BASIC21.4■■□□□ 1.02
Pcdh18Q8VHR0 Rfx5-205ENSMUST00000107260 2355 ntAPPRIS P1 TSL 5 BASIC21.39■■□□□ 1.02
Pcdh18Q8VHR0 Hoxd1-201ENSMUST00000047793 1862 ntAPPRIS P1 TSL 1 (best) BASIC21.39■■□□□ 1.02
Pcdh18Q8VHR0 Lsm4-204ENSMUST00000210071 575 ntTSL 5 BASIC21.39■■□□□ 1.01
Pcdh18Q8VHR0 Rnf111-204ENSMUST00000213647 4961 ntAPPRIS ALT2 TSL 1 (best) BASIC21.39■■□□□ 1.01
Pcdh18Q8VHR0 Acss2-203ENSMUST00000103142 2145 ntTSL 5 BASIC21.38■■□□□ 1.01
Pcdh18Q8VHR0 Rxrb-201ENSMUST00000044858 2623 ntAPPRIS P4 TSL 1 (best) BASIC21.38■■□□□ 1.01
Pcdh18Q8VHR0 Spsb3-205ENSMUST00000120943 1949 ntAPPRIS ALT2 TSL 1 (best) BASIC21.38■■□□□ 1.01
Pcdh18Q8VHR0 Cebpa-202ENSMUST00000205391 2161 ntTSL 5 BASIC21.38■■□□□ 1.01
Pcdh18Q8VHR0 Fbxw4-201ENSMUST00000046869 2068 ntAPPRIS P1 TSL 1 (best) BASIC21.38■■□□□ 1.01
Pcdh18Q8VHR0 Cys1-207ENSMUST00000186602 1757 ntAPPRIS P1 TSL 1 (best) BASIC21.38■■□□□ 1.01
Pcdh18Q8VHR0 Man1a-203ENSMUST00000105470 2847 ntAPPRIS P1 TSL 5 BASIC21.37■■□□□ 1.01
Pcdh18Q8VHR0 Tmem200b-201ENSMUST00000094666 1370 ntAPPRIS P1 BASIC21.37■■□□□ 1.01
Pcdh18Q8VHR0 Lbx1-201ENSMUST00000099401 2484 ntAPPRIS P1 TSL 1 (best) BASIC21.37■■□□□ 1.01
Pcdh18Q8VHR0 Maz-203ENSMUST00000205568 2650 ntAPPRIS P1 TSL 5 BASIC21.37■■□□□ 1.01
Pcdh18Q8VHR0 Snx3-203ENSMUST00000105500 753 ntTSL 5 BASIC21.37■■□□□ 1.01
Pcdh18Q8VHR0 Uba52-207ENSMUST00000140679 697 ntAPPRIS P1 TSL 2 BASIC21.37■■□□□ 1.01
Pcdh18Q8VHR0 Gm31266-201ENSMUST00000192060 656 ntTSL 5 BASIC21.37■■□□□ 1.01
Pcdh18Q8VHR0 Bend6-201ENSMUST00000062289 2487 ntAPPRIS P1 TSL 1 (best) BASIC21.37■■□□□ 1.01
Pcdh18Q8VHR0 Cnnm1-202ENSMUST00000223787 2931 ntAPPRIS ALT2 BASIC21.37■■□□□ 1.01
Pcdh18Q8VHR0 Nrsn1-201ENSMUST00000057866 2222 ntAPPRIS P1 TSL 1 (best) BASIC21.36■■□□□ 1.01
Pcdh18Q8VHR0 Nab2-202ENSMUST00000099157 2311 ntTSL 1 (best) BASIC21.36■■□□□ 1.01
Pcdh18Q8VHR0 Prr5-201ENSMUST00000065499 1830 ntAPPRIS P3 TSL 1 (best) BASIC21.36■■□□□ 1.01
Pcdh18Q8VHR0 Map2k7-207ENSMUST00000110999 1578 ntTSL 1 (best) BASIC21.36■■□□□ 1.01
Pcdh18Q8VHR0 Mapkapk2-201ENSMUST00000016672 2854 ntAPPRIS P1 TSL 1 (best) BASIC21.35■■□□□ 1.01
Retrieved 100 of 76,532 protein–RNA pairs in 15.5 ms