Protein–RNA interactions for Protein: Q8R316

Hbp1, HMG box-containing protein 1, mousemouse

Predictions only

Length 516 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Hbp1Q8R316 Npas1-201ENSMUST00000002053 2091 ntAPPRIS P1 TSL 5 BASIC22.38■■□□□ 1.17
Hbp1Q8R316 Actr3b-202ENSMUST00000128727 2031 ntTSL 1 (best) BASIC22.38■■□□□ 1.17
Hbp1Q8R316 Slc39a13-203ENSMUST00000111436 1291 ntTSL 1 (best) BASIC22.38■■□□□ 1.17
Hbp1Q8R316 Gm20109-201ENSMUST00000180802 671 ntTSL 1 (best) BASIC22.38■■□□□ 1.17
Hbp1Q8R316 Aldoa-214ENSMUST00000207534 741 ntAPPRIS P1 TSL 5 BASIC22.38■■□□□ 1.17
Hbp1Q8R316 Fam149b-201ENSMUST00000037698 924 ntTSL 1 (best) BASIC22.38■■□□□ 1.17
Hbp1Q8R316 Tmem11-201ENSMUST00000062677 1457 ntAPPRIS P1 TSL 1 (best) BASIC22.37■■□□□ 1.17
Hbp1Q8R316 Krtap28-10-201ENSMUST00000188323 957 ntAPPRIS P1 BASIC22.37■■□□□ 1.17
Hbp1Q8R316 Dbndd2-202ENSMUST00000069385 1658 ntAPPRIS P1 TSL 1 (best) BASIC22.36■■□□□ 1.17
Hbp1Q8R316 Vmac-201ENSMUST00000067931 2174 ntAPPRIS P3 TSL 1 (best) BASIC22.36■■□□□ 1.17
Hbp1Q8R316 Arhgap9-203ENSMUST00000219026 1946 ntAPPRIS P2 TSL 1 (best) BASIC22.36■■□□□ 1.17
Hbp1Q8R316 2310061I04Rik-202ENSMUST00000146451 2081 ntTSL 1 (best) BASIC22.36■■□□□ 1.17
Hbp1Q8R316 Htatsf1-202ENSMUST00000114751 1128 ntTSL 1 (best) BASIC22.36■■□□□ 1.17
Hbp1Q8R316 Emc8-208ENSMUST00000181950 747 ntTSL 2 BASIC22.36■■□□□ 1.17
Hbp1Q8R316 Hpf1-204ENSMUST00000146863 531 ntTSL 2 BASIC22.35■■□□□ 1.17
Hbp1Q8R316 Bloc1s2-201ENSMUST00000079033 878 ntAPPRIS P1 TSL 1 (best) BASIC22.35■■□□□ 1.17
Hbp1Q8R316 Cyp2r1-202ENSMUST00000119712 917 ntTSL 5 BASIC22.34■■□□□ 1.17
Hbp1Q8R316 AC117769.4-201ENSMUST00000225679 685 ntBASIC22.34■■□□□ 1.17
Hbp1Q8R316 Tmem106c-201ENSMUST00000064200 1635 ntAPPRIS P1 TSL 1 (best) BASIC22.34■■□□□ 1.17
Hbp1Q8R316 Nrsn1-201ENSMUST00000057866 2222 ntAPPRIS P1 TSL 1 (best) BASIC22.34■■□□□ 1.17
Hbp1Q8R316 Igfbp3-202ENSMUST00000135887 1709 ntAPPRIS P1 TSL 1 (best) BASIC22.34■■□□□ 1.17
Hbp1Q8R316 Csrp1-201ENSMUST00000027677 1823 ntAPPRIS P1 TSL 1 (best) BASIC22.34■■□□□ 1.17
Hbp1Q8R316 Csrp1-202ENSMUST00000097561 1828 ntAPPRIS P1 TSL 1 (best) BASIC22.34■■□□□ 1.17
Hbp1Q8R316 Gm10499-202ENSMUST00000174778 1698 ntTSL 1 (best) BASIC22.33■■□□□ 1.17
Hbp1Q8R316 Lemd2-201ENSMUST00000055117 2595 ntAPPRIS P1 TSL 1 (best) BASIC22.33■■□□□ 1.17
Hbp1Q8R316 Ddrgk1-201ENSMUST00000089559 1238 ntAPPRIS P1 TSL 1 (best) BASIC22.33■■□□□ 1.17
Hbp1Q8R316 Usp2-206ENSMUST00000176416 1486 ntAPPRIS ALT2 TSL 1 (best) BASIC22.33■■□□□ 1.16
Hbp1Q8R316 D17Wsu92e-201ENSMUST00000075076 1470 ntTSL 1 (best) BASIC22.33■■□□□ 1.16
Hbp1Q8R316 Slc44a1-203ENSMUST00000107646 1974 ntTSL 5 BASIC22.32■■□□□ 1.16
Hbp1Q8R316 Slc16a11-207ENSMUST00000136328 1403 ntTSL 5 BASIC22.32■■□□□ 1.16
Hbp1Q8R316 Hnrnpul1-202ENSMUST00000108401 1240 ntTSL 1 (best) BASIC22.32■■□□□ 1.16
Hbp1Q8R316 Runx2-211ENSMUST00000162629 1607 ntAPPRIS ALT2 TSL 5 BASIC22.31■■□□□ 1.16
Hbp1Q8R316 Gm7276-201ENSMUST00000097520 1252 ntAPPRIS P1 BASIC22.31■■□□□ 1.16
Hbp1Q8R316 Ipmk-203ENSMUST00000121446 1492 ntAPPRIS ALT2 TSL 5 BASIC22.3■■□□□ 1.16
Hbp1Q8R316 Btf3l4-203ENSMUST00000102741 1033 ntAPPRIS P1 TSL 1 (best) BASIC22.3■■□□□ 1.16
Hbp1Q8R316 Lin7b-201ENSMUST00000003971 735 ntAPPRIS P1 TSL 1 (best) BASIC22.3■■□□□ 1.16
Hbp1Q8R316 H1fx-201ENSMUST00000056403 1217 ntAPPRIS P1 BASIC22.3■■□□□ 1.16
Hbp1Q8R316 Ctbp1-211ENSMUST00000202868 2436 ntAPPRIS ALT1 TSL 1 (best) BASIC22.3■■□□□ 1.16
Hbp1Q8R316 Zfp422-201ENSMUST00000057540 2375 ntAPPRIS P1 TSL 1 (best) BASIC22.28■■□□□ 1.16
Hbp1Q8R316 Slc25a33-201ENSMUST00000105686 1887 ntAPPRIS P1 TSL 1 (best) BASIC22.28■■□□□ 1.16
Hbp1Q8R316 Shox2-204ENSMUST00000162439 1081 ntTSL 1 (best) BASIC22.28■■□□□ 1.16
Hbp1Q8R316 Rnf115-201ENSMUST00000029740 2209 ntAPPRIS P1 TSL 1 (best) BASIC22.28■■□□□ 1.16
Hbp1Q8R316 Fam92a-208ENSMUST00000177837 1325 ntAPPRIS ALT2 TSL 5 BASIC22.28■■□□□ 1.16
Hbp1Q8R316 Rab40c-209ENSMUST00000179998 2456 ntAPPRIS P1 TSL 5 BASIC22.28■■□□□ 1.16
Hbp1Q8R316 St7-205ENSMUST00000081635 2115 ntTSL 1 (best) BASIC22.27■■□□□ 1.16
Hbp1Q8R316 Sike1-202ENSMUST00000119450 774 ntTSL 3 BASIC22.27■■□□□ 1.16
Hbp1Q8R316 Ppp1r35-201ENSMUST00000031739 956 ntAPPRIS P1 TSL 1 (best) BASIC22.27■■□□□ 1.16
Hbp1Q8R316 Pgls-201ENSMUST00000034264 893 ntAPPRIS P1 TSL 1 (best) BASIC22.27■■□□□ 1.16
Hbp1Q8R316 Lsm4-201ENSMUST00000034311 925 ntAPPRIS P1 TSL 1 (best) BASIC22.27■■□□□ 1.16
Hbp1Q8R316 Fam220a-201ENSMUST00000067145 2198 ntAPPRIS P1 TSL 1 (best) BASIC22.27■■□□□ 1.16
Hbp1Q8R316 Ntn5-203ENSMUST00000183120 1491 ntTSL 1 (best) BASIC22.27■■□□□ 1.16
Hbp1Q8R316 Hnrnpl-201ENSMUST00000038572 2142 ntAPPRIS P1 TSL 1 (best) BASIC22.27■■□□□ 1.15
Hbp1Q8R316 Prph-202ENSMUST00000047104 1865 ntAPPRIS P3 TSL 1 (best) BASIC22.26■■□□□ 1.15
Hbp1Q8R316 Slc39a13-201ENSMUST00000073575 2469 ntAPPRIS P1 TSL 1 (best) BASIC22.26■■□□□ 1.15
Hbp1Q8R316 Srd5a3-201ENSMUST00000031143 1747 ntAPPRIS P2 TSL 1 (best) BASIC22.26■■□□□ 1.15
Hbp1Q8R316 Gdf7-202ENSMUST00000220073 1399 ntAPPRIS ALT2 TSL 1 (best) BASIC22.25■■□□□ 1.15
Hbp1Q8R316 Tmem235-201ENSMUST00000093905 1820 ntAPPRIS P1 TSL 5 BASIC22.25■■□□□ 1.15
Hbp1Q8R316 Cited1-202ENSMUST00000101336 1090 ntAPPRIS P1 TSL 1 (best) BASIC22.25■■□□□ 1.15
Hbp1Q8R316 Scn1b-201ENSMUST00000098548 1573 ntAPPRIS P1 TSL 1 (best) BASIC22.25■■□□□ 1.15
Hbp1Q8R316 Rasgef1c-203ENSMUST00000093142 2216 ntAPPRIS P3 TSL 1 (best) BASIC22.25■■□□□ 1.15
Hbp1Q8R316 Kcna7-201ENSMUST00000107774 2182 ntAPPRIS P1 TSL 1 (best) BASIC22.24■■□□□ 1.15
Hbp1Q8R316 Kcnmb4os2-203ENSMUST00000127070 1048 ntTSL 2 BASIC22.24■■□□□ 1.15
Hbp1Q8R316 Cln6-201ENSMUST00000034776 2142 ntAPPRIS P1 TSL 1 (best) BASIC22.24■■□□□ 1.15
Hbp1Q8R316 Siah1a-201ENSMUST00000045296 1968 ntAPPRIS P1 TSL 1 (best) BASIC22.22■■□□□ 1.15
Hbp1Q8R316 Olfm2-203ENSMUST00000215999 1895 ntAPPRIS ALT2 TSL 3 BASIC22.21■■□□□ 1.15
Hbp1Q8R316 Ppcs-201ENSMUST00000030385 1443 ntAPPRIS P1 TSL 1 (best) BASIC22.21■■□□□ 1.15
Hbp1Q8R316 Maz-201ENSMUST00000032916 2347 ntTSL 1 (best) BASIC22.2■■□□□ 1.15
Hbp1Q8R316 Tsen34-204ENSMUST00000108630 1779 ntTSL 1 (best) BASIC22.2■■□□□ 1.14
Hbp1Q8R316 Smurf1-202ENSMUST00000100461 2725 ntAPPRIS ALT1 TSL 1 (best) BASIC22.2■■□□□ 1.14
Hbp1Q8R316 Sdccag3-202ENSMUST00000077983 1955 ntAPPRIS ALT2 TSL 1 (best) BASIC22.2■■□□□ 1.14
Hbp1Q8R316 Ttc9-201ENSMUST00000036116 2042 ntAPPRIS P1 TSL 1 (best) BASIC22.2■■□□□ 1.14
Hbp1Q8R316 Irak1-207ENSMUST00000114360 2441 ntAPPRIS ALT2 TSL 1 (best) BASIC22.2■■□□□ 1.14
Hbp1Q8R316 Rnf39-201ENSMUST00000040498 1579 ntAPPRIS P1 TSL 1 (best) BASIC22.2■■□□□ 1.14
Hbp1Q8R316 Fgf16-201ENSMUST00000033581 1645 ntAPPRIS P1 TSL 1 (best) BASIC22.2■■□□□ 1.14
Hbp1Q8R316 Six3-201ENSMUST00000162695 2838 ntAPPRIS ALT2 TSL 5 BASIC22.2■■□□□ 1.14
Hbp1Q8R316 Becn1-216ENSMUST00000170502 725 ntTSL 1 (best) BASIC22.19■■□□□ 1.14
Hbp1Q8R316 Gm5921-201ENSMUST00000075898 882 ntBASIC22.19■■□□□ 1.14
Hbp1Q8R316 Bag1-203ENSMUST00000191273 1348 ntAPPRIS ALT2 TSL 1 (best) BASIC22.19■■□□□ 1.14
Hbp1Q8R316 Prr5-202ENSMUST00000171460 1719 ntAPPRIS ALT2 TSL 1 (best) BASIC22.18■■□□□ 1.14
Hbp1Q8R316 6430628N08Rik-202ENSMUST00000165938 1602 ntTSL 5 BASIC22.18■■□□□ 1.14
Hbp1Q8R316 Sox17-202ENSMUST00000116652 1512 ntAPPRIS P1 TSL 1 (best) BASIC22.18■■□□□ 1.14
Hbp1Q8R316 Nudt6-204ENSMUST00000108118 935 ntTSL 5 BASIC22.18■■□□□ 1.14
Hbp1Q8R316 Nudt6-201ENSMUST00000052645 1155 ntAPPRIS ALT2 TSL 1 (best) BASIC22.18■■□□□ 1.14
Hbp1Q8R316 Nudt6-202ENSMUST00000099130 1070 ntAPPRIS P3 TSL 1 (best) BASIC22.18■■□□□ 1.14
Hbp1Q8R316 Prr3-201ENSMUST00000055454 2727 ntAPPRIS P3 TSL 1 (best) BASIC22.18■■□□□ 1.14
Hbp1Q8R316 Gpr27-201ENSMUST00000101122 2388 ntAPPRIS P1 BASIC22.18■■□□□ 1.14
Hbp1Q8R316 Panx2-202ENSMUST00000161372 2314 ntTSL 1 (best) BASIC22.18■■□□□ 1.14
Hbp1Q8R316 Jag2-201ENSMUST00000075827 5106 ntAPPRIS P1 TSL 1 (best) BASIC22.18■■□□□ 1.14
Hbp1Q8R316 E2f6-201ENSMUST00000020908 2418 ntAPPRIS P1 TSL 1 (best) BASIC22.17■■□□□ 1.14
Hbp1Q8R316 Zfp513-202ENSMUST00000114590 2228 ntAPPRIS P1 TSL 1 (best) BASIC22.17■■□□□ 1.14
Hbp1Q8R316 Fam50b-202ENSMUST00000221037 1345 ntAPPRIS P1 TSL 1 (best) BASIC22.17■■□□□ 1.14
Hbp1Q8R316 AC161180.1-201ENSMUST00000223439 933 ntAPPRIS P1 BASIC22.17■■□□□ 1.14
Hbp1Q8R316 Gm38287-201ENSMUST00000195193 2051 ntTSL 3 BASIC22.17■■□□□ 1.14
Hbp1Q8R316 AC164433.2-201ENSMUST00000226346 1701 ntBASIC22.17■■□□□ 1.14
Hbp1Q8R316 Cldnd1-204ENSMUST00000162057 1540 ntAPPRIS P1 TSL 5 BASIC22.16■■□□□ 1.14
Hbp1Q8R316 Mxra7-201ENSMUST00000021170 2063 ntAPPRIS P3 TSL 1 (best) BASIC22.16■■□□□ 1.14
Hbp1Q8R316 Bin1-202ENSMUST00000091967 2118 ntAPPRIS ALT2 TSL 1 (best) BASIC22.16■■□□□ 1.14
Hbp1Q8R316 Dapk2-201ENSMUST00000034944 1772 ntAPPRIS P1 TSL 1 (best) BASIC22.15■■□□□ 1.14
Hbp1Q8R316 Susd3-203ENSMUST00000119721 1249 ntAPPRIS ALT2 TSL 1 (best) BASIC22.15■■□□□ 1.14
Hbp1Q8R316 Gm43592-201ENSMUST00000196922 1165 ntBASIC22.15■■□□□ 1.14
Retrieved 100 of 76,532 protein–RNA pairs in 53.5 ms