Protein–RNA interactions for Protein: Q8R1J3

Zcchc9, Zinc finger CCHC domain-containing protein 9, mousemouse

Known RBP Predictions only

Length 271 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Zcchc9Q8R1J3 Efcc1-202ENSMUST00000159570 2293 ntAPPRIS P2 TSL 5 BASIC22.44■■□□□ 1.18
Zcchc9Q8R1J3 Cpsf4-205ENSMUST00000160629 1713 ntAPPRIS ALT1 TSL 1 (best) BASIC22.44■■□□□ 1.18
Zcchc9Q8R1J3 Sh3gl3-201ENSMUST00000032874 1647 ntAPPRIS P1 TSL 1 (best) BASIC22.44■■□□□ 1.18
Zcchc9Q8R1J3 A230020J21Rik-202ENSMUST00000192407 1649 ntTSL 2 BASIC22.42■■□□□ 1.18
Zcchc9Q8R1J3 Faim-202ENSMUST00000112911 803 ntAPPRIS ALT1 TSL 2 BASIC22.42■■□□□ 1.18
Zcchc9Q8R1J3 Pxmp2-201ENSMUST00000031472 1041 ntAPPRIS P1 TSL 1 (best) BASIC22.42■■□□□ 1.18
Zcchc9Q8R1J3 Zbtb12-201ENSMUST00000052778 1858 ntAPPRIS P1 TSL 1 (best) BASIC22.42■■□□□ 1.18
Zcchc9Q8R1J3 A830010M20Rik-207ENSMUST00000162298 1408 ntTSL 5 BASIC22.41■■□□□ 1.18
Zcchc9Q8R1J3 Ccsap-201ENSMUST00000034452 2390 ntAPPRIS P1 TSL 1 (best) BASIC22.41■■□□□ 1.18
Zcchc9Q8R1J3 Wnt2-201ENSMUST00000010941 2255 ntAPPRIS P1 TSL 1 (best) BASIC22.41■■□□□ 1.18
Zcchc9Q8R1J3 Gm5921-201ENSMUST00000075898 882 ntBASIC22.41■■□□□ 1.18
Zcchc9Q8R1J3 Hoxb3-201ENSMUST00000055334 1890 ntAPPRIS P1 TSL 1 (best) BASIC22.41■■□□□ 1.18
Zcchc9Q8R1J3 Deaf1-201ENSMUST00000080553 2135 ntAPPRIS P1 TSL 1 (best) BASIC22.4■■□□□ 1.18
Zcchc9Q8R1J3 Foxa2-202ENSMUST00000109964 2070 ntAPPRIS ALT2 TSL 1 (best) BASIC22.4■■□□□ 1.18
Zcchc9Q8R1J3 Pura-201ENSMUST00000051301 3145 ntAPPRIS P1 TSL 1 (best) BASIC22.4■■□□□ 1.18
Zcchc9Q8R1J3 Gm16286-202ENSMUST00000125127 1683 ntAPPRIS P1 TSL 1 (best) BASIC22.39■■□□□ 1.18
Zcchc9Q8R1J3 Hnrnpl-201ENSMUST00000038572 2142 ntAPPRIS P1 TSL 1 (best) BASIC22.39■■□□□ 1.18
Zcchc9Q8R1J3 Lin7b-201ENSMUST00000003971 735 ntAPPRIS P1 TSL 1 (best) BASIC22.39■■□□□ 1.17
Zcchc9Q8R1J3 Gm5812-201ENSMUST00000061073 957 ntBASIC22.39■■□□□ 1.17
Zcchc9Q8R1J3 Fads2-201ENSMUST00000025567 1508 ntAPPRIS P1 TSL 1 (best) BASIC22.38■■□□□ 1.17
Zcchc9Q8R1J3 Kcnmb4os2-203ENSMUST00000127070 1048 ntTSL 2 BASIC22.38■■□□□ 1.17
Zcchc9Q8R1J3 Sec24d-208ENSMUST00000200333 307 ntTSL 1 (best) BASIC22.38■■□□□ 1.17
Zcchc9Q8R1J3 Fam174a-201ENSMUST00000059975 2112 ntAPPRIS P1 TSL 1 (best) BASIC22.38■■□□□ 1.17
Zcchc9Q8R1J3 Ccsap-202ENSMUST00000122421 2673 ntAPPRIS P1 TSL 1 (best) BASIC22.38■■□□□ 1.17
Zcchc9Q8R1J3 Gtpbp2-201ENSMUST00000024748 2966 ntAPPRIS P1 TSL 1 (best) BASIC22.38■■□□□ 1.17
Zcchc9Q8R1J3 E2f5-201ENSMUST00000029069 1779 ntAPPRIS P2 TSL 1 (best) BASIC22.38■■□□□ 1.17
Zcchc9Q8R1J3 Slc1a5-201ENSMUST00000108496 2764 ntAPPRIS P1 TSL 1 (best) BASIC22.37■■□□□ 1.17
Zcchc9Q8R1J3 Ethe1-201ENSMUST00000077191 1484 ntAPPRIS P1 TSL 1 (best) BASIC22.37■■□□□ 1.17
Zcchc9Q8R1J3 Mapk1-201ENSMUST00000023462 2390 ntAPPRIS P1 TSL 1 (best) BASIC22.37■■□□□ 1.17
Zcchc9Q8R1J3 H1fx-201ENSMUST00000056403 1217 ntAPPRIS P1 BASIC22.37■■□□□ 1.17
Zcchc9Q8R1J3 Gm7276-201ENSMUST00000097520 1252 ntAPPRIS P1 BASIC22.37■■□□□ 1.17
Zcchc9Q8R1J3 St7-208ENSMUST00000115419 2194 ntTSL 1 (best) BASIC22.37■■□□□ 1.17
Zcchc9Q8R1J3 Homer3-201ENSMUST00000003669 2323 ntAPPRIS ALT1 TSL 1 (best) BASIC22.37■■□□□ 1.17
Zcchc9Q8R1J3 Anxa5-201ENSMUST00000029266 1731 ntAPPRIS P1 TSL 1 (best) BASIC22.37■■□□□ 1.17
Zcchc9Q8R1J3 H2-Q5-202ENSMUST00000172979 998 ntAPPRIS P1 TSL 5 BASIC22.36■■□□□ 1.17
Zcchc9Q8R1J3 Neurl1b-202ENSMUST00000182897 1231 ntTSL 5 BASIC22.36■■□□□ 1.17
Zcchc9Q8R1J3 4930597O21Rik-201ENSMUST00000065878 984 ntTSL 1 (best) BASIC22.36■■□□□ 1.17
Zcchc9Q8R1J3 Zfp91-201ENSMUST00000038627 5531 ntAPPRIS P1 TSL 1 (best) BASIC22.36■■□□□ 1.17
Zcchc9Q8R1J3 Rundc3b-202ENSMUST00000115378 1891 ntAPPRIS ALT2 TSL 5 BASIC22.36■■□□□ 1.17
Zcchc9Q8R1J3 Gm20458-201ENSMUST00000164863 1369 ntAPPRIS P1 TSL 5 BASIC22.36■■□□□ 1.17
Zcchc9Q8R1J3 Tm2d2-201ENSMUST00000033961 1281 ntAPPRIS P1 TSL 1 (best) BASIC22.35■■□□□ 1.17
Zcchc9Q8R1J3 Wdr34-201ENSMUST00000113711 1814 ntAPPRIS P1 TSL 1 (best) BASIC22.35■■□□□ 1.17
Zcchc9Q8R1J3 Fam92a-208ENSMUST00000177837 1325 ntAPPRIS ALT2 TSL 5 BASIC22.34■■□□□ 1.17
Zcchc9Q8R1J3 Kctd6-201ENSMUST00000022272 1650 ntAPPRIS P1 TSL 1 (best) BASIC22.34■■□□□ 1.17
Zcchc9Q8R1J3 Galr3-201ENSMUST00000058004 1245 ntAPPRIS P1 TSL 1 (best) BASIC22.34■■□□□ 1.17
Zcchc9Q8R1J3 Bcl7b-201ENSMUST00000031692 1758 ntAPPRIS P2 TSL 1 (best) BASIC22.34■■□□□ 1.17
Zcchc9Q8R1J3 Ppp1ca-201ENSMUST00000046094 1379 ntAPPRIS P1 TSL 1 (best) BASIC22.34■■□□□ 1.17
Zcchc9Q8R1J3 Jag2-201ENSMUST00000075827 5106 ntAPPRIS P1 TSL 1 (best) BASIC22.33■■□□□ 1.17
Zcchc9Q8R1J3 Kctd15-202ENSMUST00000108069 2407 ntAPPRIS P1 TSL 5 BASIC22.33■■□□□ 1.17
Zcchc9Q8R1J3 Frat2-201ENSMUST00000059231 2161 ntAPPRIS P1 BASIC22.33■■□□□ 1.16
Zcchc9Q8R1J3 P3h4-201ENSMUST00000066489 2178 ntAPPRIS P2 TSL 1 (best) BASIC22.33■■□□□ 1.16
Zcchc9Q8R1J3 Six3-201ENSMUST00000162695 2838 ntAPPRIS ALT2 TSL 5 BASIC22.33■■□□□ 1.16
Zcchc9Q8R1J3 Gfra4-206ENSMUST00000110240 1426 ntAPPRIS ALT2 TSL 1 (best) BASIC22.32■■□□□ 1.16
Zcchc9Q8R1J3 Fam89b-203ENSMUST00000161368 1160 ntTSL 1 (best) BASIC22.32■■□□□ 1.16
Zcchc9Q8R1J3 Arpc2-203ENSMUST00000113820 1439 ntAPPRIS P1 TSL 1 (best) BASIC22.31■■□□□ 1.16
Zcchc9Q8R1J3 Cadm1-202ENSMUST00000085909 2126 ntTSL 1 (best) BASIC22.31■■□□□ 1.16
Zcchc9Q8R1J3 Hopx-203ENSMUST00000120827 1217 ntAPPRIS P1 TSL 1 (best) BASIC22.31■■□□□ 1.16
Zcchc9Q8R1J3 Heca-201ENSMUST00000037879 5098 ntAPPRIS P1 TSL 1 (best) BASIC22.31■■□□□ 1.16
Zcchc9Q8R1J3 Lor-201ENSMUST00000058150 1779 ntAPPRIS P1 TSL 1 (best) BASIC22.3■■□□□ 1.16
Zcchc9Q8R1J3 Ybx3-202ENSMUST00000087865 1684 ntAPPRIS ALT2 TSL 1 (best) BASIC22.3■■□□□ 1.16
Zcchc9Q8R1J3 B4galt2-201ENSMUST00000030266 2312 ntAPPRIS P1 TSL 1 (best) BASIC22.3■■□□□ 1.16
Zcchc9Q8R1J3 Tmem127-202ENSMUST00000174288 842 ntTSL 2 BASIC22.3■■□□□ 1.16
Zcchc9Q8R1J3 A230005M16Rik-201ENSMUST00000137661 1605 ntTSL 1 (best) BASIC22.29■■□□□ 1.16
Zcchc9Q8R1J3 Lsm4-205ENSMUST00000210987 636 ntTSL 5 BASIC22.29■■□□□ 1.16
Zcchc9Q8R1J3 Ube2k-203ENSMUST00000201266 1449 ntTSL 5 BASIC22.29■■□□□ 1.16
Zcchc9Q8R1J3 Cadm1-206ENSMUST00000143026 1643 ntTSL 5 BASIC22.28■■□□□ 1.16
Zcchc9Q8R1J3 Hoxb3os-202ENSMUST00000147410 1945 ntTSL 5 BASIC22.28■■□□□ 1.16
Zcchc9Q8R1J3 Htatsf1-202ENSMUST00000114751 1128 ntTSL 1 (best) BASIC22.28■■□□□ 1.16
Zcchc9Q8R1J3 Gm44428-201ENSMUST00000204474 874 ntBASIC22.28■■□□□ 1.16
Zcchc9Q8R1J3 Hecw2-202ENSMUST00000097741 1132 ntTSL 1 (best) BASIC22.28■■□□□ 1.16
Zcchc9Q8R1J3 Nudt3-203ENSMUST00000114886 996 ntTSL 2 BASIC22.27■■□□□ 1.16
Zcchc9Q8R1J3 Gm22567-201ENSMUST00000175542 342 ntBASIC22.27■■□□□ 1.16
Zcchc9Q8R1J3 AC161180.1-201ENSMUST00000223439 933 ntAPPRIS P1 BASIC22.27■■□□□ 1.16
Zcchc9Q8R1J3 Ankrd28-201ENSMUST00000014640 6712 ntAPPRIS P2 TSL 1 (best) BASIC22.26■■□□□ 1.15
Zcchc9Q8R1J3 Trappc6b-207ENSMUST00000218686 785 ntTSL 3 BASIC22.26■■□□□ 1.15
Zcchc9Q8R1J3 Ildr2-206ENSMUST00000194964 2467 ntAPPRIS ALT2 TSL 1 (best) BASIC22.26■■□□□ 1.15
Zcchc9Q8R1J3 Becn1-216ENSMUST00000170502 725 ntTSL 1 (best) BASIC22.25■■□□□ 1.15
Zcchc9Q8R1J3 Gm29735-201ENSMUST00000209599 660 ntAPPRIS P1 BASIC22.25■■□□□ 1.15
Zcchc9Q8R1J3 Tmem42-201ENSMUST00000084733 1041 ntAPPRIS P1 TSL 1 (best) BASIC22.25■■□□□ 1.15
Zcchc9Q8R1J3 Csnk1g2-201ENSMUST00000079773 2348 ntTSL 1 (best) BASIC22.25■■□□□ 1.15
Zcchc9Q8R1J3 Fam50b-202ENSMUST00000221037 1345 ntAPPRIS P1 TSL 1 (best) BASIC22.25■■□□□ 1.15
Zcchc9Q8R1J3 Olfm1-201ENSMUST00000028177 2757 ntAPPRIS P1 TSL 1 (best) BASIC22.25■■□□□ 1.15
Zcchc9Q8R1J3 Tead1-203ENSMUST00000084705 2543 ntAPPRIS ALT1 TSL 1 (best) BASIC22.24■■□□□ 1.15
Zcchc9Q8R1J3 Gxylt1-202ENSMUST00000057896 1891 ntAPPRIS ALT2 TSL 5 BASIC22.24■■□□□ 1.15
Zcchc9Q8R1J3 Gm15546-201ENSMUST00000122095 826 ntBASIC22.24■■□□□ 1.15
Zcchc9Q8R1J3 Ei24-201ENSMUST00000115086 2220 ntAPPRIS P1 TSL 1 (best) BASIC22.24■■□□□ 1.15
Zcchc9Q8R1J3 Fam92a-202ENSMUST00000108285 1639 ntAPPRIS P3 TSL 5 BASIC22.24■■□□□ 1.15
Zcchc9Q8R1J3 Gm21989-201ENSMUST00000174530 1609 ntTSL 1 (best) BASIC22.23■■□□□ 1.15
Zcchc9Q8R1J3 B3gat1-201ENSMUST00000115269 1665 ntTSL 1 (best) BASIC22.23■■□□□ 1.15
Zcchc9Q8R1J3 Fam204a-201ENSMUST00000065286 2035 ntAPPRIS P1 TSL 1 (best) BASIC22.23■■□□□ 1.15
Zcchc9Q8R1J3 Zc3h6-201ENSMUST00000110319 1484 ntTSL 1 (best) BASIC22.22■■□□□ 1.15
Zcchc9Q8R1J3 D17Wsu92e-201ENSMUST00000075076 1470 ntTSL 1 (best) BASIC22.22■■□□□ 1.15
Zcchc9Q8R1J3 Ihh-201ENSMUST00000164097 2468 ntAPPRIS P1 TSL 1 (best) BASIC22.22■■□□□ 1.15
Zcchc9Q8R1J3 2610307P16Rik-205ENSMUST00000148885 1870 ntTSL 1 (best) BASIC22.22■■□□□ 1.15
Zcchc9Q8R1J3 Preb-209ENSMUST00000202567 1869 ntTSL 1 (best) BASIC22.22■■□□□ 1.15
Zcchc9Q8R1J3 Hnrnpul1-202ENSMUST00000108401 1240 ntTSL 1 (best) BASIC22.21■■□□□ 1.15
Zcchc9Q8R1J3 Snx21-203ENSMUST00000152471 1243 ntTSL 1 (best) BASIC22.21■■□□□ 1.15
Zcchc9Q8R1J3 Gm7544-201ENSMUST00000222426 828 ntAPPRIS P1 BASIC22.21■■□□□ 1.15
Zcchc9Q8R1J3 Brwd1-203ENSMUST00000113827 2382 ntTSL 1 (best) BASIC22.2■■□□□ 1.15
Zcchc9Q8R1J3 Gal3st1-202ENSMUST00000078757 1749 ntAPPRIS P1 TSL 1 (best) BASIC22.2■■□□□ 1.14
Retrieved 100 of 76,532 protein–RNA pairs in 34.1 ms