Protein–RNA interactions for Protein: Q8CGV4

Rdh1, MCG140848, mousemouse

Predictions only

Length 317 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rdh1Q8CGV4 Slc44a1-203ENSMUST00000107646 1974 ntTSL 5 BASIC22.05■■□□□ 1.12
Rdh1Q8CGV4 Tnfsfm13-203ENSMUST00000180587 2235 ntAPPRIS P3 TSL 2 BASIC22.04■■□□□ 1.12
Rdh1Q8CGV4 Cln6-201ENSMUST00000034776 2142 ntAPPRIS P1 TSL 1 (best) BASIC22.04■■□□□ 1.12
Rdh1Q8CGV4 Mpp6-209ENSMUST00000204545 2418 ntAPPRIS P1 TSL 5 BASIC22.04■■□□□ 1.12
Rdh1Q8CGV4 Cited2-203ENSMUST00000219558 2411 ntAPPRIS P1 BASIC22.04■■□□□ 1.12
Rdh1Q8CGV4 Galr3-201ENSMUST00000058004 1245 ntAPPRIS P1 TSL 1 (best) BASIC22.04■■□□□ 1.12
Rdh1Q8CGV4 A830092H15Rik-201ENSMUST00000099182 1229 ntBASIC22.04■■□□□ 1.12
Rdh1Q8CGV4 D17Wsu92e-201ENSMUST00000075076 1470 ntTSL 1 (best) BASIC22.03■■□□□ 1.12
Rdh1Q8CGV4 Gm10420-201ENSMUST00000121713 882 ntBASIC22.03■■□□□ 1.12
Rdh1Q8CGV4 Gm5067-201ENSMUST00000170449 1009 ntBASIC22.03■■□□□ 1.12
Rdh1Q8CGV4 Lsm4-205ENSMUST00000210987 636 ntTSL 5 BASIC22.03■■□□□ 1.12
Rdh1Q8CGV4 Scn1b-201ENSMUST00000098548 1573 ntAPPRIS P1 TSL 1 (best) BASIC22.03■■□□□ 1.12
Rdh1Q8CGV4 Sdccag3-202ENSMUST00000077983 1955 ntAPPRIS ALT2 TSL 1 (best) BASIC22.03■■□□□ 1.12
Rdh1Q8CGV4 Slc25a33-201ENSMUST00000105686 1887 ntAPPRIS P1 TSL 1 (best) BASIC22.03■■□□□ 1.12
Rdh1Q8CGV4 Nrep-202ENSMUST00000168890 2185 ntAPPRIS P1 TSL 1 (best) BASIC22.02■■□□□ 1.12
Rdh1Q8CGV4 B230377A18Rik-202ENSMUST00000192921 1364 ntBASIC22.02■■□□□ 1.12
Rdh1Q8CGV4 Sft2d1-210ENSMUST00000154553 1049 ntAPPRIS P1 TSL 1 (best) BASIC22.02■■□□□ 1.12
Rdh1Q8CGV4 Vegfa-211ENSMUST00000167860 975 ntTSL 1 (best) BASIC22.02■■□□□ 1.12
Rdh1Q8CGV4 Krtap28-10-201ENSMUST00000188323 957 ntAPPRIS P1 BASIC22.02■■□□□ 1.12
Rdh1Q8CGV4 Vegfa-212ENSMUST00000214739 1107 ntAPPRIS ALT2 TSL 1 (best) BASIC22.02■■□□□ 1.12
Rdh1Q8CGV4 Vegfa-213ENSMUST00000217017 1179 ntAPPRIS P4 TSL 1 (best) BASIC22.02■■□□□ 1.12
Rdh1Q8CGV4 Kansl2-201ENSMUST00000023727 2311 ntAPPRIS ALT2 TSL 5 BASIC22.02■■□□□ 1.12
Rdh1Q8CGV4 St7-205ENSMUST00000081635 2115 ntTSL 1 (best) BASIC22.01■■□□□ 1.11
Rdh1Q8CGV4 Slc39a13-203ENSMUST00000111436 1291 ntTSL 1 (best) BASIC22.01■■□□□ 1.11
Rdh1Q8CGV4 Hpf1-204ENSMUST00000146863 531 ntTSL 2 BASIC22.01■■□□□ 1.11
Rdh1Q8CGV4 Sec63-201ENSMUST00000019937 6032 ntAPPRIS P1 TSL 1 (best) BASIC22.01■■□□□ 1.11
Rdh1Q8CGV4 Hnrnpl-201ENSMUST00000038572 2142 ntAPPRIS P1 TSL 1 (best) BASIC22.01■■□□□ 1.11
Rdh1Q8CGV4 Fam220a-201ENSMUST00000067145 2198 ntAPPRIS P1 TSL 1 (best) BASIC22.01■■□□□ 1.11
Rdh1Q8CGV4 Htatsf1-202ENSMUST00000114751 1128 ntTSL 1 (best) BASIC22■■□□□ 1.11
Rdh1Q8CGV4 Cyp2r1-202ENSMUST00000119712 917 ntTSL 5 BASIC22■■□□□ 1.11
Rdh1Q8CGV4 Olfm2-203ENSMUST00000215999 1895 ntAPPRIS ALT2 TSL 3 BASIC22■■□□□ 1.11
Rdh1Q8CGV4 Tmem106c-201ENSMUST00000064200 1635 ntAPPRIS P1 TSL 1 (best) BASIC21.99■■□□□ 1.11
Rdh1Q8CGV4 Gm38287-201ENSMUST00000195193 2051 ntTSL 3 BASIC21.99■■□□□ 1.11
Rdh1Q8CGV4 Mxra7-201ENSMUST00000021170 2063 ntAPPRIS P3 TSL 1 (best) BASIC21.99■■□□□ 1.11
Rdh1Q8CGV4 Dbndd2-202ENSMUST00000069385 1658 ntAPPRIS P1 TSL 1 (best) BASIC21.99■■□□□ 1.11
Rdh1Q8CGV4 Ipmk-203ENSMUST00000121446 1492 ntAPPRIS ALT2 TSL 5 BASIC21.99■■□□□ 1.11
Rdh1Q8CGV4 Ei24-202ENSMUST00000163192 2309 ntAPPRIS P1 TSL 1 (best) BASIC21.99■■□□□ 1.11
Rdh1Q8CGV4 Btf3l4-203ENSMUST00000102741 1033 ntAPPRIS P1 TSL 1 (best) BASIC21.99■■□□□ 1.11
Rdh1Q8CGV4 Emc8-208ENSMUST00000181950 747 ntTSL 2 BASIC21.99■■□□□ 1.11
Rdh1Q8CGV4 Aldoa-214ENSMUST00000207534 741 ntAPPRIS P1 TSL 5 BASIC21.99■■□□□ 1.11
Rdh1Q8CGV4 Bloc1s2-201ENSMUST00000079033 878 ntAPPRIS P1 TSL 1 (best) BASIC21.99■■□□□ 1.11
Rdh1Q8CGV4 Tsen34-204ENSMUST00000108630 1779 ntTSL 1 (best) BASIC21.99■■□□□ 1.11
Rdh1Q8CGV4 Usp2-206ENSMUST00000176416 1486 ntAPPRIS ALT2 TSL 1 (best) BASIC21.98■■□□□ 1.11
Rdh1Q8CGV4 Tspan33-202ENSMUST00000115250 1977 ntAPPRIS ALT1 TSL 1 (best) BASIC21.98■■□□□ 1.11
Rdh1Q8CGV4 Hnrnpul1-202ENSMUST00000108401 1240 ntTSL 1 (best) BASIC21.98■■□□□ 1.11
Rdh1Q8CGV4 Fam149b-201ENSMUST00000037698 924 ntTSL 1 (best) BASIC21.98■■□□□ 1.11
Rdh1Q8CGV4 Ddrgk1-201ENSMUST00000089559 1238 ntAPPRIS P1 TSL 1 (best) BASIC21.98■■□□□ 1.11
Rdh1Q8CGV4 Siah1a-201ENSMUST00000045296 1968 ntAPPRIS P1 TSL 1 (best) BASIC21.98■■□□□ 1.11
Rdh1Q8CGV4 Nans-201ENSMUST00000030018 2179 ntAPPRIS P1 TSL 1 (best) BASIC21.97■■□□□ 1.11
Rdh1Q8CGV4 Snta1-201ENSMUST00000028991 2125 ntAPPRIS ALT2 TSL 1 (best) BASIC21.97■■□□□ 1.11
Rdh1Q8CGV4 Tmem260-208ENSMUST00000226400 2281 ntAPPRIS ALT2 BASIC21.96■■□□□ 1.11
Rdh1Q8CGV4 Ttc9-201ENSMUST00000036116 2042 ntAPPRIS P1 TSL 1 (best) BASIC21.96■■□□□ 1.11
Rdh1Q8CGV4 Gdf7-202ENSMUST00000220073 1399 ntAPPRIS ALT2 TSL 1 (best) BASIC21.96■■□□□ 1.11
Rdh1Q8CGV4 Ei24-201ENSMUST00000115086 2220 ntAPPRIS P1 TSL 1 (best) BASIC21.95■■□□□ 1.1
Rdh1Q8CGV4 Srd5a3-201ENSMUST00000031143 1747 ntAPPRIS P2 TSL 1 (best) BASIC21.95■■□□□ 1.1
Rdh1Q8CGV4 Zdhhc2-205ENSMUST00000167766 1759 ntAPPRIS P1 TSL 1 (best) BASIC21.95■■□□□ 1.1
Rdh1Q8CGV4 Epb41l4b-203ENSMUST00000095076 6746 ntAPPRIS ALT2 TSL 5 BASIC21.95■■□□□ 1.1
Rdh1Q8CGV4 Foxc1-201ENSMUST00000062292 5844 ntAPPRIS P1 BASIC21.95■■□□□ 1.1
Rdh1Q8CGV4 Fzd9-201ENSMUST00000062572 2293 ntAPPRIS P1 BASIC21.94■■□□□ 1.1
Rdh1Q8CGV4 Pgls-201ENSMUST00000034264 893 ntAPPRIS P1 TSL 1 (best) BASIC21.94■■□□□ 1.1
Rdh1Q8CGV4 Peg12-201ENSMUST00000094339 2640 ntAPPRIS P1 BASIC21.94■■□□□ 1.1
Rdh1Q8CGV4 E2f1-201ENSMUST00000000894 2755 ntAPPRIS ALT2 TSL 1 (best) BASIC21.94■■□□□ 1.1
Rdh1Q8CGV4 Dnajc21-201ENSMUST00000136591 2060 ntAPPRIS P1 TSL 5 BASIC21.94■■□□□ 1.1
Rdh1Q8CGV4 Efcc1-202ENSMUST00000159570 2293 ntAPPRIS P2 TSL 5 BASIC21.93■■□□□ 1.1
Rdh1Q8CGV4 Runx2-211ENSMUST00000162629 1607 ntAPPRIS ALT2 TSL 5 BASIC21.93■■□□□ 1.1
Rdh1Q8CGV4 Rnf39-201ENSMUST00000040498 1579 ntAPPRIS P1 TSL 1 (best) BASIC21.93■■□□□ 1.1
Rdh1Q8CGV4 Maz-204ENSMUST00000206254 2282 ntTSL 5 BASIC21.92■■□□□ 1.1
Rdh1Q8CGV4 Hdac2-201ENSMUST00000019911 2005 ntAPPRIS P1 TSL 1 (best) BASIC21.92■■□□□ 1.1
Rdh1Q8CGV4 Slc16a11-207ENSMUST00000136328 1403 ntTSL 5 BASIC21.92■■□□□ 1.1
Rdh1Q8CGV4 Shox2-204ENSMUST00000162439 1081 ntTSL 1 (best) BASIC21.92■■□□□ 1.1
Rdh1Q8CGV4 Tmem235-201ENSMUST00000093905 1820 ntAPPRIS P1 TSL 5 BASIC21.92■■□□□ 1.1
Rdh1Q8CGV4 Tmem9b-201ENSMUST00000033333 1703 ntAPPRIS P2 TSL 1 (best) BASIC21.92■■□□□ 1.1
Rdh1Q8CGV4 Ntn5-203ENSMUST00000183120 1491 ntTSL 1 (best) BASIC21.9■■□□□ 1.1
Rdh1Q8CGV4 Slc16a11-201ENSMUST00000094055 1788 ntAPPRIS P1 TSL 1 (best) BASIC21.9■■□□□ 1.1
Rdh1Q8CGV4 AC164433.2-201ENSMUST00000226346 1701 ntBASIC21.9■■□□□ 1.1
Rdh1Q8CGV4 AC117769.4-201ENSMUST00000225679 685 ntBASIC21.9■■□□□ 1.1
Rdh1Q8CGV4 H1fx-201ENSMUST00000056403 1217 ntAPPRIS P1 BASIC21.9■■□□□ 1.1
Rdh1Q8CGV4 Otud5-205ENSMUST00000115668 2543 ntTSL 1 (best) BASIC21.89■■□□□ 1.1
Rdh1Q8CGV4 Prr5-202ENSMUST00000171460 1719 ntAPPRIS ALT2 TSL 1 (best) BASIC21.89■■□□□ 1.1
Rdh1Q8CGV4 Sike1-202ENSMUST00000119450 774 ntTSL 3 BASIC21.89■■□□□ 1.09
Rdh1Q8CGV4 Dapk2-201ENSMUST00000034944 1772 ntAPPRIS P1 TSL 1 (best) BASIC21.89■■□□□ 1.09
Rdh1Q8CGV4 Ppp1r35-201ENSMUST00000031739 956 ntAPPRIS P1 TSL 1 (best) BASIC21.88■■□□□ 1.09
Rdh1Q8CGV4 Lin7b-201ENSMUST00000003971 735 ntAPPRIS P1 TSL 1 (best) BASIC21.88■■□□□ 1.09
Rdh1Q8CGV4 Foxe3-201ENSMUST00000050940 867 ntAPPRIS P1 BASIC21.87■■□□□ 1.09
Rdh1Q8CGV4 Epop-201ENSMUST00000052281 2314 ntAPPRIS P1 BASIC21.87■■□□□ 1.09
Rdh1Q8CGV4 2510039O18Rik-201ENSMUST00000103232 2731 ntAPPRIS P1 TSL 1 (best) BASIC21.87■■□□□ 1.09
Rdh1Q8CGV4 Zswim5-201ENSMUST00000044823 5582 ntAPPRIS P1 TSL 1 (best) BASIC21.87■■□□□ 1.09
Rdh1Q8CGV4 Tbc1d25-203ENSMUST00000143984 2184 ntAPPRIS ALT2 TSL 5 BASIC21.87■■□□□ 1.09
Rdh1Q8CGV4 Cldnd1-204ENSMUST00000162057 1540 ntAPPRIS P1 TSL 5 BASIC21.86■■□□□ 1.09
Rdh1Q8CGV4 Fam126a-206ENSMUST00000197617 2288 ntTSL 5 BASIC21.86■■□□□ 1.09
Rdh1Q8CGV4 Fam92a-208ENSMUST00000177837 1325 ntAPPRIS ALT2 TSL 5 BASIC21.86■■□□□ 1.09
Rdh1Q8CGV4 Bag1-203ENSMUST00000191273 1348 ntAPPRIS ALT2 TSL 1 (best) BASIC21.86■■□□□ 1.09
Rdh1Q8CGV4 Nudt6-204ENSMUST00000108118 935 ntTSL 5 BASIC21.86■■□□□ 1.09
Rdh1Q8CGV4 Nudt6-201ENSMUST00000052645 1155 ntAPPRIS ALT2 TSL 1 (best) BASIC21.86■■□□□ 1.09
Rdh1Q8CGV4 Nudt6-202ENSMUST00000099130 1070 ntAPPRIS P3 TSL 1 (best) BASIC21.86■■□□□ 1.09
Rdh1Q8CGV4 Fgf16-201ENSMUST00000033581 1645 ntAPPRIS P1 TSL 1 (best) BASIC21.86■■□□□ 1.09
Rdh1Q8CGV4 Spsb3-205ENSMUST00000120943 1949 ntAPPRIS ALT2 TSL 1 (best) BASIC21.86■■□□□ 1.09
Rdh1Q8CGV4 St7-207ENSMUST00000115418 1678 ntTSL 5 BASIC21.85■■□□□ 1.09
Rdh1Q8CGV4 Ildr2-206ENSMUST00000194964 2467 ntAPPRIS ALT2 TSL 1 (best) BASIC21.85■■□□□ 1.09
Rdh1Q8CGV4 Lsm4-201ENSMUST00000034311 925 ntAPPRIS P1 TSL 1 (best) BASIC21.85■■□□□ 1.09
Retrieved 100 of 76,532 protein–RNA pairs in 24.6 ms