Protein–RNA interactions for Protein: Q8CG16

C1ra, Complement C1r-A subcomponent, mousemouse

Predictions only

Length 707 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
C1raQ8CG16 Arhgdia-201ENSMUST00000067936 2150 ntAPPRIS P1 TSL 1 (best) BASIC22.42■■□□□ 1.18
C1raQ8CG16 Srcap-211ENSMUST00000189136 1960 ntTSL 1 (best) BASIC22.41■■□□□ 1.18
C1raQ8CG16 D17Wsu92e-201ENSMUST00000075076 1470 ntTSL 1 (best) BASIC22.41■■□□□ 1.18
C1raQ8CG16 Msto1-202ENSMUST00000126245 1875 ntAPPRIS P1 TSL 1 (best) BASIC22.41■■□□□ 1.18
C1raQ8CG16 Hist2h3c1-201ENSMUST00000176059 1820 ntAPPRIS P1 BASIC22.41■■□□□ 1.18
C1raQ8CG16 Hist2h3c1-202ENSMUST00000177796 1825 ntBASIC22.41■■□□□ 1.18
C1raQ8CG16 Pmvk-201ENSMUST00000029564 1194 ntAPPRIS P1 TSL 1 (best) BASIC22.41■■□□□ 1.18
C1raQ8CG16 Gm5921-201ENSMUST00000075898 882 ntBASIC22.41■■□□□ 1.18
C1raQ8CG16 Cited4-201ENSMUST00000094814 1249 ntAPPRIS P1 BASIC22.41■■□□□ 1.18
C1raQ8CG16 Tmem70-203ENSMUST00000177501 1636 ntAPPRIS P3 TSL 1 (best) BASIC22.41■■□□□ 1.18
C1raQ8CG16 Pdpk1-203ENSMUST00000115407 1730 ntTSL 5 BASIC22.4■■□□□ 1.18
C1raQ8CG16 Dleu7-201ENSMUST00000063169 1314 ntAPPRIS P1 TSL 1 (best) BASIC22.4■■□□□ 1.18
C1raQ8CG16 Hnrnpul1-202ENSMUST00000108401 1240 ntTSL 1 (best) BASIC22.4■■□□□ 1.18
C1raQ8CG16 E2f6-201ENSMUST00000020908 2418 ntAPPRIS P1 TSL 1 (best) BASIC22.39■■□□□ 1.18
C1raQ8CG16 Mapkap1-202ENSMUST00000113124 1758 ntAPPRIS ALT1 TSL 5 BASIC22.39■■□□□ 1.17
C1raQ8CG16 Glrx3-201ENSMUST00000064404 1685 ntAPPRIS P2 TSL 1 (best) BASIC22.39■■□□□ 1.17
C1raQ8CG16 Tm2d2-201ENSMUST00000033961 1281 ntAPPRIS P1 TSL 1 (best) BASIC22.38■■□□□ 1.17
C1raQ8CG16 Usp2-206ENSMUST00000176416 1486 ntAPPRIS ALT2 TSL 1 (best) BASIC22.38■■□□□ 1.17
C1raQ8CG16 Kcnk2-205ENSMUST00000192723 1642 ntAPPRIS ALT1 TSL 1 (best) BASIC22.38■■□□□ 1.17
C1raQ8CG16 Cited2-203ENSMUST00000219558 2411 ntAPPRIS P1 BASIC22.38■■□□□ 1.17
C1raQ8CG16 Ctbp1-211ENSMUST00000202868 2436 ntAPPRIS ALT1 TSL 1 (best) BASIC22.37■■□□□ 1.17
C1raQ8CG16 Rnf19b-201ENSMUST00000030584 2414 ntAPPRIS ALT2 TSL 5 BASIC22.37■■□□□ 1.17
C1raQ8CG16 AC161180.1-201ENSMUST00000223439 933 ntAPPRIS P1 BASIC22.37■■□□□ 1.17
C1raQ8CG16 Ipmk-203ENSMUST00000121446 1492 ntAPPRIS ALT2 TSL 5 BASIC22.36■■□□□ 1.17
C1raQ8CG16 Hoxd9-201ENSMUST00000059272 2136 ntAPPRIS P1 TSL 1 (best) BASIC22.36■■□□□ 1.17
C1raQ8CG16 Neurl1b-202ENSMUST00000182897 1231 ntTSL 5 BASIC22.36■■□□□ 1.17
C1raQ8CG16 Zfp422-201ENSMUST00000057540 2375 ntAPPRIS P1 TSL 1 (best) BASIC22.36■■□□□ 1.17
C1raQ8CG16 Rbm45-201ENSMUST00000046389 1898 ntAPPRIS P1 TSL 1 (best) BASIC22.36■■□□□ 1.17
C1raQ8CG16 Frat2-201ENSMUST00000059231 2161 ntAPPRIS P1 BASIC22.36■■□□□ 1.17
C1raQ8CG16 AC153890.1-201ENSMUST00000220021 2469 ntBASIC22.36■■□□□ 1.17
C1raQ8CG16 Suds3-201ENSMUST00000086471 2425 ntAPPRIS P3 TSL 1 (best) BASIC22.36■■□□□ 1.17
C1raQ8CG16 Fam89b-203ENSMUST00000161368 1160 ntTSL 1 (best) BASIC22.35■■□□□ 1.17
C1raQ8CG16 Becn1-216ENSMUST00000170502 725 ntTSL 1 (best) BASIC22.35■■□□□ 1.17
C1raQ8CG16 Gm20208-202ENSMUST00000219905 1528 ntTSL 1 (best) BASIC22.35■■□□□ 1.17
C1raQ8CG16 B230377A18Rik-202ENSMUST00000192921 1364 ntBASIC22.35■■□□□ 1.17
C1raQ8CG16 Csnk1g2-201ENSMUST00000079773 2348 ntTSL 1 (best) BASIC22.35■■□□□ 1.17
C1raQ8CG16 Cadm1-209ENSMUST00000152459 1784 ntTSL 1 (best) BASIC22.35■■□□□ 1.17
C1raQ8CG16 Fam50b-202ENSMUST00000221037 1345 ntAPPRIS P1 TSL 1 (best) BASIC22.34■■□□□ 1.17
C1raQ8CG16 Gfra4-206ENSMUST00000110240 1426 ntAPPRIS ALT2 TSL 1 (best) BASIC22.34■■□□□ 1.17
C1raQ8CG16 Tmem11-201ENSMUST00000062677 1457 ntAPPRIS P1 TSL 1 (best) BASIC22.34■■□□□ 1.17
C1raQ8CG16 Fam149b-203ENSMUST00000090499 2370 ntAPPRIS P4 TSL 1 (best) BASIC22.33■■□□□ 1.17
C1raQ8CG16 Cyp2r1-202ENSMUST00000119712 917 ntTSL 5 BASIC22.33■■□□□ 1.17
C1raQ8CG16 Lsm4-201ENSMUST00000034311 925 ntAPPRIS P1 TSL 1 (best) BASIC22.33■■□□□ 1.17
C1raQ8CG16 Mnx1-201ENSMUST00000001608 2018 ntAPPRIS ALT2 TSL 5 BASIC22.33■■□□□ 1.16
C1raQ8CG16 Irak1-207ENSMUST00000114360 2441 ntAPPRIS ALT2 TSL 1 (best) BASIC22.32■■□□□ 1.16
C1raQ8CG16 Ccna1-202ENSMUST00000197238 1719 ntAPPRIS P1 TSL 5 BASIC22.32■■□□□ 1.16
C1raQ8CG16 Tmem42-201ENSMUST00000084733 1041 ntAPPRIS P1 TSL 1 (best) BASIC22.32■■□□□ 1.16
C1raQ8CG16 Kcnj6-201ENSMUST00000095873 1773 ntTSL 1 (best) BASIC22.32■■□□□ 1.16
C1raQ8CG16 E2f1-201ENSMUST00000000894 2755 ntAPPRIS ALT2 TSL 1 (best) BASIC22.32■■□□□ 1.16
C1raQ8CG16 Smurf1-202ENSMUST00000100461 2725 ntAPPRIS ALT1 TSL 1 (best) BASIC22.31■■□□□ 1.16
C1raQ8CG16 Zc3h6-201ENSMUST00000110319 1484 ntTSL 1 (best) BASIC22.31■■□□□ 1.16
C1raQ8CG16 Ntn5-203ENSMUST00000183120 1491 ntTSL 1 (best) BASIC22.31■■□□□ 1.16
C1raQ8CG16 Faim-202ENSMUST00000112911 803 ntAPPRIS ALT1 TSL 2 BASIC22.31■■□□□ 1.16
C1raQ8CG16 Bag1-203ENSMUST00000191273 1348 ntAPPRIS ALT2 TSL 1 (best) BASIC22.31■■□□□ 1.16
C1raQ8CG16 Upf3a-201ENSMUST00000043767 2057 ntAPPRIS P1 TSL 1 (best) BASIC22.3■■□□□ 1.16
C1raQ8CG16 Gng12-204ENSMUST00000114225 1876 ntAPPRIS P1 TSL 1 (best) BASIC22.3■■□□□ 1.16
C1raQ8CG16 Gpr12-201ENSMUST00000036211 2219 ntAPPRIS P1 TSL 1 (best) BASIC22.3■■□□□ 1.16
C1raQ8CG16 AC117769.4-201ENSMUST00000225679 685 ntBASIC22.3■■□□□ 1.16
C1raQ8CG16 Gm5812-201ENSMUST00000061073 957 ntBASIC22.29■■□□□ 1.16
C1raQ8CG16 5031425E22Rik-201ENSMUST00000101522 2110 ntBASIC22.28■■□□□ 1.16
C1raQ8CG16 Efna2-201ENSMUST00000003154 2131 ntAPPRIS P1 TSL 1 (best) BASIC22.28■■□□□ 1.16
C1raQ8CG16 Runx2-211ENSMUST00000162629 1607 ntAPPRIS ALT2 TSL 5 BASIC22.28■■□□□ 1.16
C1raQ8CG16 Vmac-201ENSMUST00000067931 2174 ntAPPRIS P3 TSL 1 (best) BASIC22.28■■□□□ 1.16
C1raQ8CG16 Hopx-203ENSMUST00000120827 1217 ntAPPRIS P1 TSL 1 (best) BASIC22.28■■□□□ 1.16
C1raQ8CG16 Sec24d-208ENSMUST00000200333 307 ntTSL 1 (best) BASIC22.28■■□□□ 1.16
C1raQ8CG16 Asf1a-201ENSMUST00000020004 2201 ntAPPRIS P1 TSL 1 (best) BASIC22.27■■□□□ 1.16
C1raQ8CG16 Foxe3-201ENSMUST00000050940 867 ntAPPRIS P1 BASIC22.27■■□□□ 1.16
C1raQ8CG16 Peg12-201ENSMUST00000094339 2640 ntAPPRIS P1 BASIC22.27■■□□□ 1.16
C1raQ8CG16 Scn1b-201ENSMUST00000098548 1573 ntAPPRIS P1 TSL 1 (best) BASIC22.27■■□□□ 1.16
C1raQ8CG16 Jmjd6-201ENSMUST00000047616 1668 ntAPPRIS P1 TSL 1 (best) BASIC22.26■■□□□ 1.15
C1raQ8CG16 Snx21-203ENSMUST00000152471 1243 ntTSL 1 (best) BASIC22.26■■□□□ 1.15
C1raQ8CG16 H2-Q5-202ENSMUST00000172979 998 ntAPPRIS P1 TSL 5 BASIC22.26■■□□□ 1.15
C1raQ8CG16 Paqr3-202ENSMUST00000112968 1875 ntTSL 1 (best) BASIC22.26■■□□□ 1.15
C1raQ8CG16 Npas1-201ENSMUST00000002053 2091 ntAPPRIS P1 TSL 5 BASIC22.26■■□□□ 1.15
C1raQ8CG16 Tmem127-202ENSMUST00000174288 842 ntTSL 2 BASIC22.25■■□□□ 1.15
C1raQ8CG16 Adra1d-201ENSMUST00000103184 1899 ntAPPRIS P1 TSL 1 (best) BASIC22.25■■□□□ 1.15
C1raQ8CG16 Pon2-201ENSMUST00000057792 2409 ntAPPRIS P1 TSL 1 (best) BASIC22.25■■□□□ 1.15
C1raQ8CG16 Tmem106c-201ENSMUST00000064200 1635 ntAPPRIS P1 TSL 1 (best) BASIC22.24■■□□□ 1.15
C1raQ8CG16 Smurf1-203ENSMUST00000110677 5420 ntTSL 5 BASIC22.24■■□□□ 1.15
C1raQ8CG16 Sh3rf1-201ENSMUST00000034060 5479 ntAPPRIS P1 TSL 1 (best) BASIC22.23■■□□□ 1.15
C1raQ8CG16 Cys1-207ENSMUST00000186602 1757 ntAPPRIS P1 TSL 1 (best) BASIC22.23■■□□□ 1.15
C1raQ8CG16 Gm29735-201ENSMUST00000209599 660 ntAPPRIS P1 BASIC22.23■■□□□ 1.15
C1raQ8CG16 Dhrs11-201ENSMUST00000047560 1254 ntAPPRIS P1 TSL 1 (best) BASIC22.23■■□□□ 1.15
C1raQ8CG16 Slc39a13-201ENSMUST00000073575 2469 ntAPPRIS P1 TSL 1 (best) BASIC22.23■■□□□ 1.15
C1raQ8CG16 Fgf16-201ENSMUST00000033581 1645 ntAPPRIS P1 TSL 1 (best) BASIC22.23■■□□□ 1.15
C1raQ8CG16 AC122428.3-201ENSMUST00000215551 2290 ntBASIC22.23■■□□□ 1.15
C1raQ8CG16 2310061I04Rik-202ENSMUST00000146451 2081 ntTSL 1 (best) BASIC22.22■■□□□ 1.15
C1raQ8CG16 Ica1-201ENSMUST00000038403 2075 ntAPPRIS P2 TSL 1 (best) BASIC22.22■■□□□ 1.15
C1raQ8CG16 Fam220a-206ENSMUST00000196487 2278 ntAPPRIS P1 TSL 1 (best) BASIC22.22■■□□□ 1.15
C1raQ8CG16 March5-202ENSMUST00000112391 1293 ntTSL 1 (best) BASIC22.22■■□□□ 1.15
C1raQ8CG16 Gm43592-201ENSMUST00000196922 1165 ntBASIC22.22■■□□□ 1.15
C1raQ8CG16 AC166358.2-201ENSMUST00000223403 734 ntTSL 5 BASIC22.22■■□□□ 1.15
C1raQ8CG16 Pxmp2-201ENSMUST00000031472 1041 ntAPPRIS P1 TSL 1 (best) BASIC22.22■■□□□ 1.15
C1raQ8CG16 Dexi-201ENSMUST00000038281 1389 ntAPPRIS P1 TSL 1 (best) BASIC22.22■■□□□ 1.15
C1raQ8CG16 Gm6217-201ENSMUST00000222182 829 ntAPPRIS P1 BASIC22.21■■□□□ 1.15
C1raQ8CG16 Gm7544-201ENSMUST00000222426 828 ntAPPRIS P1 BASIC22.21■■□□□ 1.15
C1raQ8CG16 St7-205ENSMUST00000081635 2115 ntTSL 1 (best) BASIC22.2■■□□□ 1.14
C1raQ8CG16 Eif5a-208ENSMUST00000108611 1353 ntAPPRIS P1 TSL 1 (best) BASIC22.2■■□□□ 1.14
C1raQ8CG16 Mpnd-208ENSMUST00000159996 1444 ntAPPRIS ALT2 TSL 5 BASIC22.2■■□□□ 1.14
C1raQ8CG16 Gm2415-202ENSMUST00000134688 401 ntTSL 2 BASIC22.19■■□□□ 1.14
Retrieved 100 of 76,532 protein–RNA pairs in 12.8 ms