Protein–RNA interactions for Protein: Q8C8C1

Rtp1, Receptor-transporting protein 1, mousemouse

Predictions only

Length 263 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rtp1Q8C8C1 Polr1d-201ENSMUST00000050970 1196 ntAPPRIS P1 TSL 1 (best) BASIC26.31■■□□□ 1.8
Rtp1Q8C8C1 Pkig-202ENSMUST00000099105 640 ntAPPRIS P1 TSL 2 BASIC26.31■■□□□ 1.8
Rtp1Q8C8C1 Jdp2-201ENSMUST00000050687 1643 ntAPPRIS P1 TSL 1 (best) BASIC26.31■■□□□ 1.8
Rtp1Q8C8C1 Tsg101-201ENSMUST00000014546 1949 ntAPPRIS P1 TSL 1 (best) BASIC26.31■■□□□ 1.8
Rtp1Q8C8C1 Ybx3-201ENSMUST00000032309 1853 ntAPPRIS P4 TSL 1 (best) BASIC26.3■■□□□ 1.8
Rtp1Q8C8C1 Gm16599-201ENSMUST00000148082 1182 ntTSL 1 (best) BASIC26.3■■□□□ 1.8
Rtp1Q8C8C1 Phf23-201ENSMUST00000018716 2006 ntAPPRIS P3 TSL 1 (best) BASIC26.3■■□□□ 1.8
Rtp1Q8C8C1 Dnttip1-201ENSMUST00000017443 1664 ntAPPRIS P1 TSL 1 (best) BASIC26.3■■□□□ 1.8
Rtp1Q8C8C1 Cckbr-202ENSMUST00000181339 1326 ntTSL 1 (best) BASIC26.3■■□□□ 1.8
Rtp1Q8C8C1 Pdf-201ENSMUST00000055316 1306 ntAPPRIS P1 TSL 1 (best) BASIC26.3■■□□□ 1.8
Rtp1Q8C8C1 Tmem120b-202ENSMUST00000111619 1256 ntTSL 1 (best) BASIC26.29■■□□□ 1.8
Rtp1Q8C8C1 Klhl25-205ENSMUST00000206019 2299 ntAPPRIS P1 TSL 1 (best) BASIC26.28■■□□□ 1.8
Rtp1Q8C8C1 Mir155hg-202ENSMUST00000185662 1362 ntTSL 5 BASIC26.28■■□□□ 1.8
Rtp1Q8C8C1 Gm9767-201ENSMUST00000041011 1193 ntAPPRIS P1 BASIC26.27■■□□□ 1.8
Rtp1Q8C8C1 1700016K19Rik-201ENSMUST00000066408 921 ntAPPRIS P1 TSL 1 (best) BASIC26.27■■□□□ 1.8
Rtp1Q8C8C1 Hrh3-205ENSMUST00000165762 1368 ntAPPRIS ALT2 TSL 5 BASIC26.27■■□□□ 1.8
Rtp1Q8C8C1 Ube2k-206ENSMUST00000201984 1449 ntTSL 3 BASIC26.27■■□□□ 1.8
Rtp1Q8C8C1 Ppp1r14c-202ENSMUST00000217573 2013 ntTSL 1 (best) BASIC26.26■■□□□ 1.79
Rtp1Q8C8C1 Ipmk-203ENSMUST00000121446 1492 ntAPPRIS ALT2 TSL 5 BASIC26.25■■□□□ 1.79
Rtp1Q8C8C1 Arhgap22-201ENSMUST00000111955 2148 ntTSL 1 (best) BASIC26.25■■□□□ 1.79
Rtp1Q8C8C1 Gm18755-201ENSMUST00000218030 1099 ntBASIC26.25■■□□□ 1.79
Rtp1Q8C8C1 Fn1-208ENSMUST00000186940 1350 ntTSL 1 (best) BASIC26.24■■□□□ 1.79
Rtp1Q8C8C1 AC122379.1-201ENSMUST00000220658 355 ntTSL 3 BASIC26.24■■□□□ 1.79
Rtp1Q8C8C1 Arl8a-201ENSMUST00000027684 1713 ntAPPRIS P1 TSL 1 (best) BASIC26.23■■□□□ 1.79
Rtp1Q8C8C1 AC117245.1-201ENSMUST00000215481 566 ntTSL 3 BASIC26.23■■□□□ 1.79
Rtp1Q8C8C1 Sh3gl3-201ENSMUST00000032874 1647 ntAPPRIS P1 TSL 1 (best) BASIC26.23■■□□□ 1.79
Rtp1Q8C8C1 Esrra-201ENSMUST00000025906 2242 ntAPPRIS P1 TSL 1 (best) BASIC26.23■■□□□ 1.79
Rtp1Q8C8C1 Fam168b-204ENSMUST00000170092 941 ntTSL 5 BASIC26.21■■□□□ 1.79
Rtp1Q8C8C1 Kctd6-201ENSMUST00000022272 1650 ntAPPRIS P1 TSL 1 (best) BASIC26.21■■□□□ 1.79
Rtp1Q8C8C1 2410017I17Rik-202ENSMUST00000090537 2053 ntTSL 2 BASIC26.21■■□□□ 1.79
Rtp1Q8C8C1 Mogs-201ENSMUST00000032114 2780 ntAPPRIS P1 TSL 1 (best) BASIC26.2■■□□□ 1.79
Rtp1Q8C8C1 Ubp1-203ENSMUST00000116492 2111 ntAPPRIS ALT1 TSL 1 (best) BASIC26.2■■□□□ 1.79
Rtp1Q8C8C1 Usp2-206ENSMUST00000176416 1486 ntAPPRIS ALT2 TSL 1 (best) BASIC26.2■■□□□ 1.78
Rtp1Q8C8C1 Ctxn1-201ENSMUST00000053252 1212 ntAPPRIS P1 TSL 1 (best) BASIC26.2■■□□□ 1.78
Rtp1Q8C8C1 Kcnip3-202ENSMUST00000088538 1296 ntAPPRIS P1 TSL 1 (best) BASIC26.2■■□□□ 1.78
Rtp1Q8C8C1 Barx1-201ENSMUST00000021813 1399 ntAPPRIS P1 TSL 1 (best) BASIC26.2■■□□□ 1.78
Rtp1Q8C8C1 Marveld2-202ENSMUST00000163163 2187 ntTSL 1 (best) BASIC26.19■■□□□ 1.78
Rtp1Q8C8C1 Ssbp4-205ENSMUST00000210369 1828 ntTSL 2 BASIC26.19■■□□□ 1.78
Rtp1Q8C8C1 E130218I03Rik-208ENSMUST00000144222 1729 ntAPPRIS P1 TSL 1 (best) BASIC26.19■■□□□ 1.78
Rtp1Q8C8C1 Gm14121-201ENSMUST00000121441 1380 ntBASIC26.19■■□□□ 1.78
Rtp1Q8C8C1 Adprhl2-201ENSMUST00000102617 1672 ntAPPRIS P1 TSL 1 (best) BASIC26.19■■□□□ 1.78
Rtp1Q8C8C1 Ntn5-203ENSMUST00000183120 1491 ntTSL 1 (best) BASIC26.18■■□□□ 1.78
Rtp1Q8C8C1 Zfp346-203ENSMUST00000159278 1253 ntAPPRIS ALT2 TSL 5 BASIC26.18■■□□□ 1.78
Rtp1Q8C8C1 Ccdc85c-201ENSMUST00000136175 1302 ntAPPRIS ALT2 TSL 5 BASIC26.17■■□□□ 1.78
Rtp1Q8C8C1 Arhgap39-204ENSMUST00000176219 542 ntTSL 5 BASIC26.17■■□□□ 1.78
Rtp1Q8C8C1 A230020J21Rik-202ENSMUST00000192407 1649 ntTSL 2 BASIC26.17■■□□□ 1.78
Rtp1Q8C8C1 Pgp-201ENSMUST00000053024 1027 ntAPPRIS P1 TSL 1 (best) BASIC26.16■■□□□ 1.78
Rtp1Q8C8C1 Hecw2-202ENSMUST00000097741 1132 ntTSL 1 (best) BASIC26.16■■□□□ 1.78
Rtp1Q8C8C1 Neurog2-201ENSMUST00000029587 2227 ntAPPRIS P1 TSL 1 (best) BASIC26.15■■□□□ 1.78
Rtp1Q8C8C1 Cyp2r1-202ENSMUST00000119712 917 ntTSL 5 BASIC26.15■■□□□ 1.78
Rtp1Q8C8C1 Mpnd-208ENSMUST00000159996 1444 ntAPPRIS ALT2 TSL 5 BASIC26.14■■□□□ 1.78
Rtp1Q8C8C1 Snrpb-201ENSMUST00000103199 1161 ntAPPRIS P1 TSL 1 (best) BASIC26.14■■□□□ 1.78
Rtp1Q8C8C1 Rundc3b-202ENSMUST00000115378 1891 ntAPPRIS ALT2 TSL 5 BASIC26.14■■□□□ 1.78
Rtp1Q8C8C1 Ost4-202ENSMUST00000132253 1144 ntAPPRIS P1 TSL 1 (best) BASIC26.13■■□□□ 1.77
Rtp1Q8C8C1 Dynlt1f-201ENSMUST00000179554 807 ntAPPRIS P1 TSL 1 (best) BASIC26.13■■□□□ 1.77
Rtp1Q8C8C1 Slc37a3-211ENSMUST00000202749 434 ntTSL 5 BASIC26.13■■□□□ 1.77
Rtp1Q8C8C1 Vegfb-201ENSMUST00000025914 1281 ntAPPRIS P3 TSL 1 (best) BASIC26.13■■□□□ 1.77
Rtp1Q8C8C1 Ech1-201ENSMUST00000066264 1267 ntAPPRIS P1 TSL 1 (best) BASIC26.13■■□□□ 1.77
Rtp1Q8C8C1 Gmeb1-202ENSMUST00000105964 1925 ntAPPRIS P1 TSL 1 (best) BASIC26.13■■□□□ 1.77
Rtp1Q8C8C1 Gm26536-201ENSMUST00000181072 1196 ntTSL 1 (best) BASIC26.12■■□□□ 1.77
Rtp1Q8C8C1 Tlx2-201ENSMUST00000089641 1236 ntAPPRIS P1 TSL 1 (best) BASIC26.12■■□□□ 1.77
Rtp1Q8C8C1 Usf1-210ENSMUST00000167546 1822 ntAPPRIS P1 TSL 5 BASIC26.11■■□□□ 1.77
Rtp1Q8C8C1 Tmem55b-209ENSMUST00000162957 1465 ntTSL 1 (best) BASIC26.11■■□□□ 1.77
Rtp1Q8C8C1 Dusp15-202ENSMUST00000109811 753 ntTSL 1 (best) BASIC26.11■■□□□ 1.77
Rtp1Q8C8C1 Ndfip1-201ENSMUST00000025293 930 ntAPPRIS P1 TSL 1 (best) BASIC26.11■■□□□ 1.77
Rtp1Q8C8C1 Socs1-201ENSMUST00000038099 1220 ntAPPRIS P1 TSL 1 (best) BASIC26.11■■□□□ 1.77
Rtp1Q8C8C1 C1qtnf5-203ENSMUST00000114818 1337 ntAPPRIS P1 TSL 5 BASIC26.11■■□□□ 1.77
Rtp1Q8C8C1 Gm21989-201ENSMUST00000174530 1609 ntTSL 1 (best) BASIC26.1■■□□□ 1.77
Rtp1Q8C8C1 B3gat1-201ENSMUST00000115269 1665 ntTSL 1 (best) BASIC26.1■■□□□ 1.77
Rtp1Q8C8C1 H3f3a-207ENSMUST00000162814 724 ntAPPRIS P2 TSL 3 BASIC26.09■■□□□ 1.77
Rtp1Q8C8C1 1700065D16Rik-202ENSMUST00000188975 506 ntTSL 3 BASIC26.09■■□□□ 1.77
Rtp1Q8C8C1 Smco4-203ENSMUST00000215907 994 ntAPPRIS P1 TSL 1 (best) BASIC26.09■■□□□ 1.77
Rtp1Q8C8C1 Cpsf4-205ENSMUST00000160629 1713 ntAPPRIS ALT1 TSL 1 (best) BASIC26.08■■□□□ 1.77
Rtp1Q8C8C1 Ybx3-202ENSMUST00000087865 1684 ntAPPRIS ALT2 TSL 1 (best) BASIC26.07■■□□□ 1.76
Rtp1Q8C8C1 Gm35161-201ENSMUST00000221765 941 ntTSL 5 BASIC26.07■■□□□ 1.76
Rtp1Q8C8C1 Ablim1-208ENSMUST00000111544 2231 ntTSL 5 BASIC26.07■■□□□ 1.76
Rtp1Q8C8C1 Tm6sf1-201ENSMUST00000041890 2226 ntAPPRIS P1 TSL 1 (best) BASIC26.06■■□□□ 1.76
Rtp1Q8C8C1 Fgf8-206ENSMUST00000111928 1056 ntTSL 1 (best) BASIC26.06■■□□□ 1.76
Rtp1Q8C8C1 Etf1-202ENSMUST00000180351 108 ntBASIC26.06■■□□□ 1.76
Rtp1Q8C8C1 Copz2-201ENSMUST00000018816 930 ntAPPRIS P1 TSL 1 (best) BASIC26.06■■□□□ 1.76
Rtp1Q8C8C1 Serp2-204ENSMUST00000228055 705 ntBASIC26.06■■□□□ 1.76
Rtp1Q8C8C1 Oaz2-206ENSMUST00000153700 1843 ntAPPRIS P2 TSL 5 BASIC26.05■■□□□ 1.76
Rtp1Q8C8C1 Tfpt-204ENSMUST00000155592 1091 ntAPPRIS P3 TSL 1 (best) BASIC26.05■■□□□ 1.76
Rtp1Q8C8C1 4930527J03Rik-201ENSMUST00000094270 543 ntBASIC26.05■■□□□ 1.76
Rtp1Q8C8C1 Sac3d1-201ENSMUST00000113533 1374 ntAPPRIS P1 TSL 1 (best) BASIC26.05■■□□□ 1.76
Rtp1Q8C8C1 Terf2-203ENSMUST00000116425 2471 ntTSL 1 (best) BASIC26.05■■□□□ 1.76
Rtp1Q8C8C1 Metrnl-201ENSMUST00000036742 1401 ntAPPRIS P2 TSL 1 (best) BASIC26.05■■□□□ 1.76
Rtp1Q8C8C1 Gm45095-201ENSMUST00000206736 254 ntTSL 5 BASIC26.03■■□□□ 1.76
Rtp1Q8C8C1 Sec61a2-201ENSMUST00000026926 756 ntTSL 5 BASIC26.03■■□□□ 1.76
Rtp1Q8C8C1 Acbd6-203ENSMUST00000097529 1255 ntTSL 1 (best) BASIC26.03■■□□□ 1.76
Rtp1Q8C8C1 Rgs7-206ENSMUST00000194555 2431 ntAPPRIS ALT2 TSL 1 (best) BASIC26.02■■□□□ 1.76
Rtp1Q8C8C1 Exosc8-201ENSMUST00000029316 1300 ntAPPRIS P1 TSL 1 (best) BASIC26.02■■□□□ 1.76
Rtp1Q8C8C1 Pex10-201ENSMUST00000103180 1688 ntAPPRIS P1 TSL 1 (best) BASIC26.02■■□□□ 1.76
Rtp1Q8C8C1 Nucks1-203ENSMUST00000189946 2375 ntAPPRIS ALT2 TSL 1 (best) BASIC26.02■■□□□ 1.76
Rtp1Q8C8C1 Gsc2-201ENSMUST00000012279 1172 ntAPPRIS P1 TSL 1 (best) BASIC26.01■■□□□ 1.75
Rtp1Q8C8C1 Dusp2-201ENSMUST00000028846 1617 ntAPPRIS P1 TSL 1 (best) BASIC26.01■■□□□ 1.75
Rtp1Q8C8C1 Gm37847-201ENSMUST00000192163 1497 ntBASIC26■■□□□ 1.75
Rtp1Q8C8C1 Gm31748-201ENSMUST00000194938 1497 ntBASIC26■■□□□ 1.75
Rtp1Q8C8C1 Ncoa7-206ENSMUST00000215725 1445 ntTSL 1 (best) BASIC26■■□□□ 1.75
Rtp1Q8C8C1 Eif5a-210ENSMUST00000108613 1343 ntAPPRIS P1 TSL 1 (best) BASIC26■■□□□ 1.75
Retrieved 100 of 76,532 protein–RNA pairs in 60.8 ms