Protein–RNA interactions for Protein: Q8C196

Cps1, Carbamoyl-phosphate synthase [ammonia], mitochondrial, mousemouse

Predictions only

Length 1,500 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cps1Q8C196 Tmem238-201ENSMUST00000168578 1375 ntAPPRIS P1 TSL 1 (best) BASIC31.48■■■□□ 2.63
Cps1Q8C196 Dusp2-201ENSMUST00000028846 1617 ntAPPRIS P1 TSL 1 (best) BASIC31.47■■■□□ 2.63
Cps1Q8C196 Hrasls-204ENSMUST00000162747 854 ntAPPRIS P1 TSL 1 (best) BASIC31.47■■■□□ 2.63
Cps1Q8C196 Gsk3a-202ENSMUST00000108411 2248 ntAPPRIS ALT2 TSL 5 BASIC31.47■■■□□ 2.63
Cps1Q8C196 Ssx2ip-202ENSMUST00000106149 2416 ntAPPRIS ALT2 TSL 1 (best) BASIC31.47■■■□□ 2.63
Cps1Q8C196 C1qtnf5-203ENSMUST00000114818 1337 ntAPPRIS P1 TSL 5 BASIC31.46■■■□□ 2.63
Cps1Q8C196 Cckbr-202ENSMUST00000181339 1326 ntTSL 1 (best) BASIC31.46■■■□□ 2.63
Cps1Q8C196 Sox17-202ENSMUST00000116652 1512 ntAPPRIS P1 TSL 1 (best) BASIC31.46■■■□□ 2.63
Cps1Q8C196 Zfp346-203ENSMUST00000159278 1253 ntAPPRIS ALT2 TSL 5 BASIC31.46■■■□□ 2.63
Cps1Q8C196 Rps24-207ENSMUST00000224568 714 ntBASIC31.46■■■□□ 2.63
Cps1Q8C196 March2-203ENSMUST00000172767 1381 ntAPPRIS P1 TSL 1 (best) BASIC31.46■■■□□ 2.63
Cps1Q8C196 Kcnk2-205ENSMUST00000192723 1642 ntAPPRIS ALT1 TSL 1 (best) BASIC31.45■■■□□ 2.63
Cps1Q8C196 Fam168b-204ENSMUST00000170092 941 ntTSL 5 BASIC31.45■■■□□ 2.63
Cps1Q8C196 Mpv17l2-201ENSMUST00000038626 980 ntAPPRIS P1 TSL 1 (best) BASIC31.45■■■□□ 2.63
Cps1Q8C196 Fgf8-206ENSMUST00000111928 1056 ntTSL 1 (best) BASIC31.44■■■□□ 2.62
Cps1Q8C196 B230377A18Rik-202ENSMUST00000192921 1364 ntBASIC31.44■■■□□ 2.62
Cps1Q8C196 Tmem106c-201ENSMUST00000064200 1635 ntAPPRIS P1 TSL 1 (best) BASIC31.44■■■□□ 2.62
Cps1Q8C196 Mpnd-209ENSMUST00000162883 1400 ntTSL 5 BASIC31.43■■■□□ 2.62
Cps1Q8C196 Crls1-201ENSMUST00000028835 1924 ntAPPRIS P1 TSL 1 (best) BASIC31.43■■■□□ 2.62
Cps1Q8C196 Suv39h2-202ENSMUST00000060618 1831 ntTSL 1 (best) BASIC31.42■■■□□ 2.62
Cps1Q8C196 Gm20208-202ENSMUST00000219905 1528 ntTSL 1 (best) BASIC31.41■■■□□ 2.62
Cps1Q8C196 Vdac1-202ENSMUST00000102758 2022 ntAPPRIS P1 TSL 1 (best) BASIC31.41■■■□□ 2.62
Cps1Q8C196 Scn1b-201ENSMUST00000098548 1573 ntAPPRIS P1 TSL 1 (best) BASIC31.4■■■□□ 2.62
Cps1Q8C196 Papola-211ENSMUST00000166735 1033 ntTSL 1 (best) BASIC31.4■■■□□ 2.62
Cps1Q8C196 1700097N02Rik-201ENSMUST00000188852 845 ntTSL 3 BASIC31.4■■■□□ 2.62
Cps1Q8C196 Kdm2a-203ENSMUST00000116571 2413 ntTSL 1 (best) BASIC31.4■■■□□ 2.62
Cps1Q8C196 Pdpk1-203ENSMUST00000115407 1730 ntTSL 5 BASIC31.4■■■□□ 2.62
Cps1Q8C196 Gt(ROSA)26Sor-201ENSMUST00000124246 1181 ntTSL 1 (best) BASIC31.39■■■□□ 2.62
Cps1Q8C196 Gm28040-202ENSMUST00000184603 890 ntAPPRIS P1 TSL 2 BASIC31.39■■■□□ 2.62
Cps1Q8C196 Gm28417-202ENSMUST00000185881 538 ntTSL 3 BASIC31.39■■■□□ 2.62
Cps1Q8C196 Runx2-211ENSMUST00000162629 1607 ntAPPRIS ALT2 TSL 5 BASIC31.39■■■□□ 2.62
Cps1Q8C196 Gm960-202ENSMUST00000177696 2262 ntAPPRIS P2 TSL 5 BASIC31.39■■■□□ 2.62
Cps1Q8C196 Fgf16-201ENSMUST00000033581 1645 ntAPPRIS P1 TSL 1 (best) BASIC31.39■■■□□ 2.62
Cps1Q8C196 Rpl34-201ENSMUST00000062601 624 ntAPPRIS P1 TSL 1 (best) BASIC31.38■■■□□ 2.61
Cps1Q8C196 Mypop-203ENSMUST00000131087 1951 ntAPPRIS P1 TSL 5 BASIC31.38■■■□□ 2.61
Cps1Q8C196 Gemin7-203ENSMUST00000119912 653 ntAPPRIS P1 TSL 3 BASIC31.37■■■□□ 2.61
Cps1Q8C196 Fam96b-203ENSMUST00000164884 918 ntAPPRIS P1 TSL 1 (best) BASIC31.37■■■□□ 2.61
Cps1Q8C196 Jmjd6-201ENSMUST00000047616 1668 ntAPPRIS P1 TSL 1 (best) BASIC31.37■■■□□ 2.61
Cps1Q8C196 Thra-202ENSMUST00000103139 2246 ntAPPRIS P1 TSL 1 (best) BASIC31.37■■■□□ 2.61
Cps1Q8C196 Ppia-202ENSMUST00000132846 1170 ntAPPRIS P1 TSL 1 (best) BASIC31.36■■■□□ 2.61
Cps1Q8C196 Pgls-205ENSMUST00000143441 1062 ntTSL 3 BASIC31.36■■■□□ 2.61
Cps1Q8C196 Tirap-205ENSMUST00000176685 1783 ntAPPRIS P1 TSL 1 (best) BASIC31.35■■■□□ 2.61
Cps1Q8C196 0610009L18Rik-201ENSMUST00000143813 619 ntTSL 2 BASIC31.35■■■□□ 2.61
Cps1Q8C196 Vax1-201ENSMUST00000172821 1044 ntAPPRIS P1 TSL 1 (best) BASIC31.35■■■□□ 2.61
Cps1Q8C196 Srcap-202ENSMUST00000098025 1257 ntTSL 5 BASIC31.35■■■□□ 2.61
Cps1Q8C196 Hrh3-205ENSMUST00000165762 1368 ntAPPRIS ALT2 TSL 5 BASIC31.35■■■□□ 2.61
Cps1Q8C196 Hoxd9-201ENSMUST00000059272 2136 ntAPPRIS P1 TSL 1 (best) BASIC31.35■■■□□ 2.61
Cps1Q8C196 Gm14117-201ENSMUST00000122417 843 ntBASIC31.34■■■□□ 2.61
Cps1Q8C196 Vcpkmt-201ENSMUST00000058639 1027 ntAPPRIS P1 TSL 1 (best) BASIC31.34■■■□□ 2.61
Cps1Q8C196 Glrx3-201ENSMUST00000064404 1685 ntAPPRIS P2 TSL 1 (best) BASIC31.34■■■□□ 2.61
Cps1Q8C196 Fn1-208ENSMUST00000186940 1350 ntTSL 1 (best) BASIC31.34■■■□□ 2.61
Cps1Q8C196 Gm45095-201ENSMUST00000206736 254 ntTSL 5 BASIC31.34■■■□□ 2.61
Cps1Q8C196 Gm45102-201ENSMUST00000207427 857 ntBASIC31.34■■■□□ 2.61
Cps1Q8C196 Scand1-201ENSMUST00000079125 759 ntAPPRIS P1 TSL 1 (best) BASIC31.34■■■□□ 2.61
Cps1Q8C196 Rbm45-201ENSMUST00000046389 1898 ntAPPRIS P1 TSL 1 (best) BASIC31.33■■■□□ 2.61
Cps1Q8C196 Cldnd1-204ENSMUST00000162057 1540 ntAPPRIS P1 TSL 5 BASIC31.33■■■□□ 2.61
Cps1Q8C196 A430027H14Rik-201ENSMUST00000191809 1467 ntBASIC31.31■■■□□ 2.6
Cps1Q8C196 Gm9767-201ENSMUST00000041011 1193 ntAPPRIS P1 BASIC31.31■■■□□ 2.6
Cps1Q8C196 Tmem70-203ENSMUST00000177501 1636 ntAPPRIS P3 TSL 1 (best) BASIC31.31■■■□□ 2.6
Cps1Q8C196 Cdkn2d-203ENSMUST00000215619 1423 ntAPPRIS P1 TSL 1 (best) BASIC31.31■■■□□ 2.6
Cps1Q8C196 Amer2-203ENSMUST00000225247 2662 ntBASIC31.31■■■□□ 2.6
Cps1Q8C196 Hdgf-201ENSMUST00000005017 2245 ntAPPRIS P1 TSL 1 (best) BASIC31.3■■■□□ 2.6
Cps1Q8C196 Tmem150b-201ENSMUST00000086363 1341 ntAPPRIS P1 TSL 1 (best) BASIC31.3■■■□□ 2.6
Cps1Q8C196 AC117769.4-201ENSMUST00000225679 685 ntBASIC31.29■■■□□ 2.6
Cps1Q8C196 Ctxn1-201ENSMUST00000053252 1212 ntAPPRIS P1 TSL 1 (best) BASIC31.29■■■□□ 2.6
Cps1Q8C196 Ndfip1-201ENSMUST00000025293 930 ntAPPRIS P1 TSL 1 (best) BASIC31.29■■■□□ 2.6
Cps1Q8C196 Metrnl-201ENSMUST00000036742 1401 ntAPPRIS P2 TSL 1 (best) BASIC31.28■■■□□ 2.6
Cps1Q8C196 1700065D16Rik-202ENSMUST00000188975 506 ntTSL 3 BASIC31.28■■■□□ 2.6
Cps1Q8C196 Tmem235-201ENSMUST00000093905 1820 ntAPPRIS P1 TSL 5 BASIC31.27■■■□□ 2.6
Cps1Q8C196 Tmem55b-209ENSMUST00000162957 1465 ntTSL 1 (best) BASIC31.26■■■□□ 2.6
Cps1Q8C196 Syce3-201ENSMUST00000109314 448 ntAPPRIS P1 TSL 1 (best) BASIC31.26■■■□□ 2.59
Cps1Q8C196 Ccna1-202ENSMUST00000197238 1719 ntAPPRIS P1 TSL 5 BASIC31.26■■■□□ 2.59
Cps1Q8C196 Sds-204ENSMUST00000201684 1288 ntAPPRIS P1 TSL 5 BASIC31.25■■■□□ 2.59
Cps1Q8C196 Smox-206ENSMUST00000110183 1159 ntTSL 1 (best) BASIC31.24■■■□□ 2.59
Cps1Q8C196 Kcnj6-201ENSMUST00000095873 1773 ntTSL 1 (best) BASIC31.24■■■□□ 2.59
Cps1Q8C196 1700016K19Rik-201ENSMUST00000066408 921 ntAPPRIS P1 TSL 1 (best) BASIC31.24■■■□□ 2.59
Cps1Q8C196 Ubl7-208ENSMUST00000216841 1426 ntAPPRIS P1 TSL 5 BASIC31.23■■■□□ 2.59
Cps1Q8C196 Eif5a-213ENSMUST00000164359 1281 ntAPPRIS P1 TSL 5 BASIC31.23■■■□□ 2.59
Cps1Q8C196 Fkbp1b-201ENSMUST00000020964 976 ntAPPRIS P1 TSL 1 (best) BASIC31.23■■■□□ 2.59
Cps1Q8C196 Siah1a-201ENSMUST00000045296 1968 ntAPPRIS P1 TSL 1 (best) BASIC31.22■■■□□ 2.59
Cps1Q8C196 Gng12-204ENSMUST00000114225 1876 ntAPPRIS P1 TSL 1 (best) BASIC31.22■■■□□ 2.59
Cps1Q8C196 Pde6d-203ENSMUST00000146220 879 ntTSL 2 BASIC31.22■■■□□ 2.59
Cps1Q8C196 Arpp19-206ENSMUST00000168301 599 ntTSL 5 BASIC31.22■■■□□ 2.59
Cps1Q8C196 4833418N17Rik-201ENSMUST00000064826 615 ntBASIC31.22■■■□□ 2.59
Cps1Q8C196 C1qtnf5-204ENSMUST00000114821 1365 ntAPPRIS P1 TSL 2 BASIC31.21■■■□□ 2.59
Cps1Q8C196 Pde8b-204ENSMUST00000159608 2370 ntTSL 5 BASIC31.21■■■□□ 2.59
Cps1Q8C196 Dgcr6-207ENSMUST00000151266 1086 ntAPPRIS ALT1 TSL 1 (best) BASIC31.21■■■□□ 2.59
Cps1Q8C196 Tmem150a-202ENSMUST00000132243 1478 ntTSL 5 BASIC31.21■■■□□ 2.59
Cps1Q8C196 Barx1-201ENSMUST00000021813 1399 ntAPPRIS P1 TSL 1 (best) BASIC31.2■■■□□ 2.59
Cps1Q8C196 Rps19-202ENSMUST00000108429 633 ntAPPRIS P1 TSL 2 BASIC31.2■■■□□ 2.59
Cps1Q8C196 Acad9-205ENSMUST00000196648 552 ntTSL 3 BASIC31.2■■■□□ 2.59
Cps1Q8C196 Gadd45g-201ENSMUST00000021903 1071 ntAPPRIS P1 TSL 1 (best) BASIC31.2■■■□□ 2.59
Cps1Q8C196 4930524J08Rik-201ENSMUST00000046721 603 ntAPPRIS P1 BASIC31.2■■■□□ 2.59
Cps1Q8C196 Adat3-204ENSMUST00000038411 1411 ntAPPRIS P1 TSL 2 BASIC31.2■■■□□ 2.59
Cps1Q8C196 Gxylt1-202ENSMUST00000057896 1891 ntAPPRIS ALT2 TSL 5 BASIC31.2■■■□□ 2.59
Cps1Q8C196 Clpp-201ENSMUST00000002735 1207 ntAPPRIS P1 TSL 1 (best) BASIC31.19■■■□□ 2.58
Cps1Q8C196 Ech1-201ENSMUST00000066264 1267 ntAPPRIS P1 TSL 1 (best) BASIC31.19■■■□□ 2.58
Cps1Q8C196 Spag4-201ENSMUST00000038860 1473 ntAPPRIS P1 TSL 1 (best) BASIC31.19■■■□□ 2.58
Cps1Q8C196 Upp2-202ENSMUST00000071543 2150 ntTSL 1 (best) BASIC31.19■■■□□ 2.58
Cps1Q8C196 Ints11-202ENSMUST00000120794 1884 ntTSL 5 BASIC31.19■■■□□ 2.58
Retrieved 100 of 76,532 protein–RNA pairs in 38.4 ms