Protein–RNA interactions for Protein: Q80WG7

Trim36, E3 ubiquitin-protein ligase Trim36, mousemouse

Predictions only

Length 729 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim36Q80WG7 Agap2-202ENSMUST00000217941 5573 ntAPPRIS ALT2 TSL 1 (best) BASIC21.53■■□□□ 1.04
Trim36Q80WG7 Gm10499-202ENSMUST00000174778 1698 ntTSL 1 (best) BASIC21.53■■□□□ 1.04
Trim36Q80WG7 Scn1b-201ENSMUST00000098548 1573 ntAPPRIS P1 TSL 1 (best) BASIC21.53■■□□□ 1.04
Trim36Q80WG7 A330041J22Rik-201ENSMUST00000150367 1825 ntTSL 1 (best) BASIC21.52■■□□□ 1.04
Trim36Q80WG7 Agpat5-201ENSMUST00000033847 2841 ntAPPRIS ALT2 TSL 1 (best) BASIC21.52■■□□□ 1.04
Trim36Q80WG7 Ammecr1-201ENSMUST00000041317 5437 ntAPPRIS P1 TSL 1 (best) BASIC21.52■■□□□ 1.04
Trim36Q80WG7 Mfn1-201ENSMUST00000091257 4562 ntAPPRIS P1 TSL 1 (best) BASIC21.52■■□□□ 1.04
Trim36Q80WG7 Nckap1-201ENSMUST00000028386 4469 ntAPPRIS P1 TSL 1 (best) BASIC21.52■■□□□ 1.04
Trim36Q80WG7 Krtap28-13-201ENSMUST00000188005 992 ntAPPRIS P1 BASIC21.52■■□□□ 1.04
Trim36Q80WG7 1110008P14Rik-201ENSMUST00000048792 680 ntAPPRIS P1 TSL 1 (best) BASIC21.52■■□□□ 1.04
Trim36Q80WG7 Kcnc3-206ENSMUST00000208651 2728 ntAPPRIS ALT2 TSL 5 BASIC21.52■■□□□ 1.04
Trim36Q80WG7 Mprip-204ENSMUST00000116371 8766 ntAPPRIS ALT2 TSL 1 (best) BASIC21.52■■□□□ 1.04
Trim36Q80WG7 Fam89a-201ENSMUST00000055257 1338 ntAPPRIS P1 TSL 1 (best) BASIC21.52■■□□□ 1.03
Trim36Q80WG7 Rpl31-203ENSMUST00000179954 630 ntAPPRIS P1 TSL 1 (best) BASIC21.51■■□□□ 1.03
Trim36Q80WG7 Trappc6b-203ENSMUST00000217863 797 ntTSL 2 BASIC21.51■■□□□ 1.03
Trim36Q80WG7 Kif1bp-206ENSMUST00000162525 2311 ntTSL 5 BASIC21.51■■□□□ 1.03
Trim36Q80WG7 Lor-201ENSMUST00000058150 1779 ntAPPRIS P1 TSL 1 (best) BASIC21.51■■□□□ 1.03
Trim36Q80WG7 Iars2-202ENSMUST00000110974 2431 ntTSL 1 (best) BASIC21.5■■□□□ 1.03
Trim36Q80WG7 Dapk1-202ENSMUST00000077453 5491 ntAPPRIS P1 TSL 1 (best) BASIC21.5■■□□□ 1.03
Trim36Q80WG7 Gm42699-201ENSMUST00000198104 1657 ntBASIC21.5■■□□□ 1.03
Trim36Q80WG7 Ctage5-211ENSMUST00000176322 2649 ntTSL 5 BASIC21.5■■□□□ 1.03
Trim36Q80WG7 Ptpn18-206ENSMUST00000188972 414 ntTSL 1 (best) BASIC21.5■■□□□ 1.03
Trim36Q80WG7 Tceal3-201ENSMUST00000060904 1116 ntAPPRIS P1 TSL 1 (best) BASIC21.5■■□□□ 1.03
Trim36Q80WG7 Rcor3-207ENSMUST00000192866 1844 ntAPPRIS ALT2 TSL 5 BASIC21.5■■□□□ 1.03
Trim36Q80WG7 Etfa-201ENSMUST00000034866 1392 ntAPPRIS P1 TSL 1 (best) BASIC21.49■■□□□ 1.03
Trim36Q80WG7 Irx1-201ENSMUST00000077337 2373 ntAPPRIS P2 TSL 1 (best) BASIC21.49■■□□□ 1.03
Trim36Q80WG7 Ddx43-201ENSMUST00000113367 2207 ntAPPRIS P1 TSL 5 BASIC21.49■■□□□ 1.03
Trim36Q80WG7 Coro1b-201ENSMUST00000008893 1888 ntAPPRIS P1 TSL 1 (best) BASIC21.49■■□□□ 1.03
Trim36Q80WG7 Chtf8-205ENSMUST00000176515 694 ntTSL 2 BASIC21.48■■□□□ 1.03
Trim36Q80WG7 Pard6a-203ENSMUST00000211888 1179 ntTSL 1 (best) BASIC21.48■■□□□ 1.03
Trim36Q80WG7 Elf2-204ENSMUST00000108053 2611 ntTSL 1 (best) BASIC21.48■■□□□ 1.03
Trim36Q80WG7 Dirc2-201ENSMUST00000023554 5395 ntAPPRIS P1 TSL 1 (best) BASIC21.47■■□□□ 1.03
Trim36Q80WG7 Serpinb6a-206ENSMUST00000167163 1654 ntAPPRIS P1 TSL 5 BASIC21.47■■□□□ 1.03
Trim36Q80WG7 Rfwd2-201ENSMUST00000076894 5116 ntAPPRIS P1 TSL 1 (best) BASIC21.47■■□□□ 1.03
Trim36Q80WG7 Hgh1-201ENSMUST00000023213 1959 ntAPPRIS P1 TSL 1 (best) BASIC21.47■■□□□ 1.03
Trim36Q80WG7 E130218I03Rik-204ENSMUST00000131447 888 ntAPPRIS P1 TSL 5 BASIC21.47■■□□□ 1.03
Trim36Q80WG7 Lmtk3-202ENSMUST00000120005 4997 ntAPPRIS P2 TSL 1 (best) BASIC21.47■■□□□ 1.03
Trim36Q80WG7 Ccdc136-206ENSMUST00000145310 1703 ntAPPRIS ALT2 TSL 5 BASIC21.46■■□□□ 1.03
Trim36Q80WG7 Gm15156-201ENSMUST00000148217 417 ntTSL 3 BASIC21.46■■□□□ 1.03
Trim36Q80WG7 Adgrb1-201ENSMUST00000042035 6228 ntAPPRIS P1 TSL 1 (best) BASIC21.46■■□□□ 1.03
Trim36Q80WG7 Mppe1-201ENSMUST00000073054 2007 ntAPPRIS P1 TSL 1 (best) BASIC21.46■■□□□ 1.03
Trim36Q80WG7 Phf23-202ENSMUST00000101526 1706 ntAPPRIS ALT2 TSL 1 (best) BASIC21.46■■□□□ 1.03
Trim36Q80WG7 Sntb1-202ENSMUST00000110200 1225 ntTSL 1 (best) BASIC21.45■■□□□ 1.02
Trim36Q80WG7 Zcrb1-201ENSMUST00000076070 877 ntAPPRIS P3 TSL 1 (best) BASIC21.45■■□□□ 1.02
Trim36Q80WG7 Cnnm1-201ENSMUST00000165311 5037 ntAPPRIS P2 TSL 1 (best) BASIC21.45■■□□□ 1.02
Trim36Q80WG7 Nxph3-201ENSMUST00000058866 2099 ntAPPRIS P1 TSL 1 (best) BASIC21.44■■□□□ 1.02
Trim36Q80WG7 3110021N24Rik-201ENSMUST00000178992 1812 ntAPPRIS P1 TSL 5 BASIC21.44■■□□□ 1.02
Trim36Q80WG7 Gm28513-201ENSMUST00000191474 613 ntTSL 3 BASIC21.44■■□□□ 1.02
Trim36Q80WG7 Armc10-201ENSMUST00000072896 2221 ntAPPRIS P1 TSL 1 (best) BASIC21.44■■□□□ 1.02
Trim36Q80WG7 Tmem55b-201ENSMUST00000049312 1594 ntAPPRIS ALT1 TSL 1 (best) BASIC21.44■■□□□ 1.02
Trim36Q80WG7 Ralgapa1-204ENSMUST00000219432 6631 ntTSL 5 BASIC21.43■■□□□ 1.02
Trim36Q80WG7 Txnrd1-208ENSMUST00000219962 2297 ntAPPRIS P1 TSL 1 (best) BASIC21.43■■□□□ 1.02
Trim36Q80WG7 Gm17641-201ENSMUST00000166328 2350 ntBASIC21.43■■□□□ 1.02
Trim36Q80WG7 Dbndd2-202ENSMUST00000069385 1658 ntAPPRIS P1 TSL 1 (best) BASIC21.43■■□□□ 1.02
Trim36Q80WG7 Anxa5-201ENSMUST00000029266 1731 ntAPPRIS P1 TSL 1 (best) BASIC21.43■■□□□ 1.02
Trim36Q80WG7 Ppp1cc-202ENSMUST00000102528 2384 ntAPPRIS P1 TSL 1 (best) BASIC21.43■■□□□ 1.02
Trim36Q80WG7 Nckap1-202ENSMUST00000111760 4597 ntTSL 1 (best) BASIC21.42■■□□□ 1.02
Trim36Q80WG7 Lsr-201ENSMUST00000001279 2167 ntAPPRIS P3 TSL 1 (best) BASIC21.42■■□□□ 1.02
Trim36Q80WG7 Mxi1-202ENSMUST00000025998 4996 ntAPPRIS P1 TSL 1 (best) BASIC21.42■■□□□ 1.02
Trim36Q80WG7 Atn1-201ENSMUST00000088357 4433 ntAPPRIS P1 TSL 1 (best) BASIC21.42■■□□□ 1.02
Trim36Q80WG7 Wnt5b-203ENSMUST00000119369 2339 ntTSL 1 (best) BASIC21.41■■□□□ 1.02
Trim36Q80WG7 Micu2-201ENSMUST00000022543 2329 ntAPPRIS P1 TSL 1 (best) BASIC21.41■■□□□ 1.02
Trim36Q80WG7 Fam92a-202ENSMUST00000108285 1639 ntAPPRIS P3 TSL 5 BASIC21.41■■□□□ 1.02
Trim36Q80WG7 Ube2j2-205ENSMUST00000105583 1434 ntTSL 1 (best) BASIC21.41■■□□□ 1.02
Trim36Q80WG7 Gm14121-201ENSMUST00000121441 1380 ntBASIC21.41■■□□□ 1.02
Trim36Q80WG7 Gm11175-201ENSMUST00000116172 543 ntBASIC21.41■■□□□ 1.02
Trim36Q80WG7 Rnf19b-206ENSMUST00000168461 2532 ntAPPRIS P2 TSL 5 BASIC21.41■■□□□ 1.02
Trim36Q80WG7 2410022M11Rik-201ENSMUST00000186474 1911 ntBASIC21.41■■□□□ 1.02
Trim36Q80WG7 Slc1a5-201ENSMUST00000108496 2764 ntAPPRIS P1 TSL 1 (best) BASIC21.41■■□□□ 1.02
Trim36Q80WG7 Sel1l3-201ENSMUST00000031090 4512 ntAPPRIS P1 TSL 1 (best) BASIC21.4■■□□□ 1.02
Trim36Q80WG7 Gorasp2-205ENSMUST00000133432 1941 ntAPPRIS ALT2 TSL 1 (best) BASIC21.4■■□□□ 1.02
Trim36Q80WG7 Ccdc142-201ENSMUST00000101254 2317 ntAPPRIS P1 TSL 5 BASIC21.4■■□□□ 1.02
Trim36Q80WG7 Macrod2-206ENSMUST00000110064 4883 ntAPPRIS P2 TSL 1 (best) BASIC21.4■■□□□ 1.02
Trim36Q80WG7 Tsen34-201ENSMUST00000038521 1365 ntAPPRIS P1 TSL 5 BASIC21.39■■□□□ 1.02
Trim36Q80WG7 Hibadh-201ENSMUST00000031788 1825 ntAPPRIS P1 TSL 1 (best) BASIC21.39■■□□□ 1.02
Trim36Q80WG7 Chpt1-204ENSMUST00000117579 1043 ntAPPRIS ALT2 TSL 1 (best) BASIC21.39■■□□□ 1.01
Trim36Q80WG7 Dnajc21-201ENSMUST00000136591 2060 ntAPPRIS P1 TSL 5 BASIC21.39■■□□□ 1.01
Trim36Q80WG7 Abhd17b-201ENSMUST00000052556 2475 ntAPPRIS P1 TSL 5 BASIC21.39■■□□□ 1.01
Trim36Q80WG7 Slc44a1-203ENSMUST00000107646 1974 ntTSL 5 BASIC21.39■■□□□ 1.01
Trim36Q80WG7 Mad2l2-202ENSMUST00000084129 1162 ntAPPRIS P1 TSL 1 (best) BASIC21.38■■□□□ 1.01
Trim36Q80WG7 Gm5784-202ENSMUST00000220896 2016 ntTSL 1 (best) BASIC21.38■■□□□ 1.01
Trim36Q80WG7 Lsm14b-201ENSMUST00000055485 2534 ntAPPRIS P1 TSL 1 (best) BASIC21.37■■□□□ 1.01
Trim36Q80WG7 Gm26617-201ENSMUST00000180381 4429 ntTSL 3 BASIC21.37■■□□□ 1.01
Trim36Q80WG7 Strn3-202ENSMUST00000169503 2791 ntTSL 1 (best) BASIC21.36■■□□□ 1.01
Trim36Q80WG7 Pdcd4-203ENSMUST00000165617 1806 ntAPPRIS P1 TSL 1 (best) BASIC21.36■■□□□ 1.01
Trim36Q80WG7 Purg-202ENSMUST00000078058 1795 ntTSL 1 (best) BASIC21.36■■□□□ 1.01
Trim36Q80WG7 Nek6-202ENSMUST00000112895 1513 ntAPPRIS P1 TSL 1 (best) BASIC21.36■■□□□ 1.01
Trim36Q80WG7 Smagp-202ENSMUST00000172334 952 ntAPPRIS P1 TSL 2 BASIC21.36■■□□□ 1.01
Trim36Q80WG7 Gtpbp2-201ENSMUST00000024748 2966 ntAPPRIS P1 TSL 1 (best) BASIC21.36■■□□□ 1.01
Trim36Q80WG7 Hccs-201ENSMUST00000033717 2320 ntAPPRIS P1 TSL 1 (best) BASIC21.36■■□□□ 1.01
Trim36Q80WG7 P3h3-201ENSMUST00000023958 2850 ntAPPRIS P1 TSL 1 (best) BASIC21.36■■□□□ 1.01
Trim36Q80WG7 Znrf3-201ENSMUST00000109867 6311 ntAPPRIS P3 TSL 5 BASIC21.36■■□□□ 1.01
Trim36Q80WG7 Fbxw4-201ENSMUST00000046869 2068 ntAPPRIS P1 TSL 1 (best) BASIC21.35■■□□□ 1.01
Trim36Q80WG7 AC167019.3-201ENSMUST00000228225 1266 ntBASIC21.35■■□□□ 1.01
Trim36Q80WG7 Rab43-202ENSMUST00000032135 1262 ntTSL 1 (best) BASIC21.35■■□□□ 1.01
Trim36Q80WG7 Ccnyl1-203ENSMUST00000187170 1506 ntAPPRIS P1 TSL 5 BASIC21.34■■□□□ 1.01
Trim36Q80WG7 Traf3ip1-203ENSMUST00000189341 2257 ntAPPRIS ALT2 TSL 5 BASIC21.34■■□□□ 1.01
Trim36Q80WG7 Upf3a-201ENSMUST00000043767 2057 ntAPPRIS P1 TSL 1 (best) BASIC21.34■■□□□ 1.01
Trim36Q80WG7 Cadm1-210ENSMUST00000214542 899 ntTSL 1 (best) BASIC21.34■■□□□ 1.01
Trim36Q80WG7 Hexdc-201ENSMUST00000038831 2378 ntAPPRIS ALT2 TSL 5 BASIC21.34■■□□□ 1.01
Retrieved 100 of 76,532 protein–RNA pairs in 14.5 ms