Protein–RNA interactions for Protein: Q80VM9

Otop1, Otopetrin-1, mousemouse

Predictions only

Length 600 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Otop1Q80VM9 Rnf19b-201ENSMUST00000030584 2414 ntAPPRIS ALT2 TSL 5 BASIC21.68■■□□□ 1.06
Otop1Q80VM9 Mapkap1-202ENSMUST00000113124 1758 ntAPPRIS ALT1 TSL 5 BASIC21.67■■□□□ 1.06
Otop1Q80VM9 Usf2-203ENSMUST00000162228 960 ntTSL 5 BASIC21.67■■□□□ 1.06
Otop1Q80VM9 Hrasls-204ENSMUST00000162747 854 ntAPPRIS P1 TSL 1 (best) BASIC21.67■■□□□ 1.06
Otop1Q80VM9 1700097N02Rik-201ENSMUST00000188852 845 ntTSL 3 BASIC21.67■■□□□ 1.06
Otop1Q80VM9 Gm43566-201ENSMUST00000196851 808 ntBASIC21.67■■□□□ 1.06
Otop1Q80VM9 Ak2-201ENSMUST00000030583 986 ntAPPRIS P4 TSL 1 (best) BASIC21.67■■□□□ 1.06
Otop1Q80VM9 Klhl25-205ENSMUST00000206019 2299 ntAPPRIS P1 TSL 1 (best) BASIC21.67■■□□□ 1.06
Otop1Q80VM9 Arhgdia-201ENSMUST00000067936 2150 ntAPPRIS P1 TSL 1 (best) BASIC21.67■■□□□ 1.06
Otop1Q80VM9 Pon2-201ENSMUST00000057792 2409 ntAPPRIS P1 TSL 1 (best) BASIC21.66■■□□□ 1.06
Otop1Q80VM9 Syce3-201ENSMUST00000109314 448 ntAPPRIS P1 TSL 1 (best) BASIC21.66■■□□□ 1.06
Otop1Q80VM9 Dynll1-202ENSMUST00000112090 729 ntAPPRIS P1 TSL 2 BASIC21.66■■□□□ 1.06
Otop1Q80VM9 Gng12-203ENSMUST00000114224 680 ntAPPRIS P1 TSL 3 BASIC21.66■■□□□ 1.06
Otop1Q80VM9 Gng12-206ENSMUST00000114227 1125 ntAPPRIS P1 TSL 1 (best) BASIC21.66■■□□□ 1.06
Otop1Q80VM9 0610009L18Rik-201ENSMUST00000143813 619 ntTSL 2 BASIC21.66■■□□□ 1.06
Otop1Q80VM9 Lsm4-201ENSMUST00000034311 925 ntAPPRIS P1 TSL 1 (best) BASIC21.66■■□□□ 1.06
Otop1Q80VM9 Cetn4-201ENSMUST00000071400 1808 ntTSL 5 BASIC21.66■■□□□ 1.06
Otop1Q80VM9 Pex10-201ENSMUST00000103180 1688 ntAPPRIS P1 TSL 1 (best) BASIC21.66■■□□□ 1.06
Otop1Q80VM9 Clk2-202ENSMUST00000121212 2154 ntAPPRIS P3 TSL 1 (best) BASIC21.65■■□□□ 1.06
Otop1Q80VM9 H2afj-202ENSMUST00000203982 577 ntAPPRIS ALT1 TSL 3 BASIC21.65■■□□□ 1.06
Otop1Q80VM9 Asph-201ENSMUST00000038564 1174 ntTSL 1 (best) BASIC21.65■■□□□ 1.06
Otop1Q80VM9 Asph-205ENSMUST00000098275 1007 ntTSL 5 BASIC21.65■■□□□ 1.06
Otop1Q80VM9 Dnttip1-201ENSMUST00000017443 1664 ntAPPRIS P1 TSL 1 (best) BASIC21.65■■□□□ 1.06
Otop1Q80VM9 Rgs7-206ENSMUST00000194555 2431 ntAPPRIS ALT2 TSL 1 (best) BASIC21.65■■□□□ 1.06
Otop1Q80VM9 Rundc3b-202ENSMUST00000115378 1891 ntAPPRIS ALT2 TSL 5 BASIC21.64■■□□□ 1.06
Otop1Q80VM9 Mapk1-203ENSMUST00000115731 1747 ntAPPRIS P1 TSL 1 (best) BASIC21.64■■□□□ 1.06
Otop1Q80VM9 Vax1-201ENSMUST00000172821 1044 ntAPPRIS P1 TSL 1 (best) BASIC21.64■■□□□ 1.05
Otop1Q80VM9 Gm28417-202ENSMUST00000185881 538 ntTSL 3 BASIC21.64■■□□□ 1.05
Otop1Q80VM9 Gm43592-201ENSMUST00000196922 1165 ntBASIC21.64■■□□□ 1.05
Otop1Q80VM9 Gm37847-201ENSMUST00000192163 1497 ntBASIC21.64■■□□□ 1.05
Otop1Q80VM9 Gm31748-201ENSMUST00000194938 1497 ntBASIC21.64■■□□□ 1.05
Otop1Q80VM9 Gm45102-201ENSMUST00000207427 857 ntBASIC21.63■■□□□ 1.05
Otop1Q80VM9 Gemin7-203ENSMUST00000119912 653 ntAPPRIS P1 TSL 3 BASIC21.62■■□□□ 1.05
Otop1Q80VM9 Gm28040-202ENSMUST00000184603 890 ntAPPRIS P1 TSL 2 BASIC21.62■■□□□ 1.05
Otop1Q80VM9 Hecw2-202ENSMUST00000097741 1132 ntTSL 1 (best) BASIC21.62■■□□□ 1.05
Otop1Q80VM9 Fam120a-201ENSMUST00000060805 5105 ntAPPRIS P1 TSL 1 (best) BASIC21.62■■□□□ 1.05
Otop1Q80VM9 Dhrs11-201ENSMUST00000047560 1254 ntAPPRIS P1 TSL 1 (best) BASIC21.61■■□□□ 1.05
Otop1Q80VM9 Srcap-202ENSMUST00000098025 1257 ntTSL 5 BASIC21.61■■□□□ 1.05
Otop1Q80VM9 Gm10645-201ENSMUST00000098605 1090 ntAPPRIS P1 BASIC21.61■■□□□ 1.05
Otop1Q80VM9 Nr2f6-201ENSMUST00000002466 2218 ntAPPRIS P1 TSL 1 (best) BASIC21.6■■□□□ 1.05
Otop1Q80VM9 Ybx3-202ENSMUST00000087865 1684 ntAPPRIS ALT2 TSL 1 (best) BASIC21.6■■□□□ 1.05
Otop1Q80VM9 Efna3-201ENSMUST00000029673 2363 ntAPPRIS P2 TSL 1 (best) BASIC21.6■■□□□ 1.05
Otop1Q80VM9 Ipmk-203ENSMUST00000121446 1492 ntAPPRIS ALT2 TSL 5 BASIC21.6■■□□□ 1.05
Otop1Q80VM9 Rps19-202ENSMUST00000108429 633 ntAPPRIS P1 TSL 2 BASIC21.6■■□□□ 1.05
Otop1Q80VM9 March5-202ENSMUST00000112391 1293 ntTSL 1 (best) BASIC21.6■■□□□ 1.05
Otop1Q80VM9 Gm14117-201ENSMUST00000122417 843 ntBASIC21.6■■□□□ 1.05
Otop1Q80VM9 Cpsf4-205ENSMUST00000160629 1713 ntAPPRIS ALT1 TSL 1 (best) BASIC21.6■■□□□ 1.05
Otop1Q80VM9 Gm45444-201ENSMUST00000211394 898 ntBASIC21.59■■□□□ 1.05
Otop1Q80VM9 Irx4-201ENSMUST00000022095 2589 ntAPPRIS P1 TSL 1 (best) BASIC21.59■■□□□ 1.05
Otop1Q80VM9 Jdp2-201ENSMUST00000050687 1643 ntAPPRIS P1 TSL 1 (best) BASIC21.58■■□□□ 1.05
Otop1Q80VM9 Usp2-206ENSMUST00000176416 1486 ntAPPRIS ALT2 TSL 1 (best) BASIC21.58■■□□□ 1.04
Otop1Q80VM9 Arpc2-203ENSMUST00000113820 1439 ntAPPRIS P1 TSL 1 (best) BASIC21.57■■□□□ 1.04
Otop1Q80VM9 Smox-206ENSMUST00000110183 1159 ntTSL 1 (best) BASIC21.57■■□□□ 1.04
Otop1Q80VM9 Gm21989-201ENSMUST00000174530 1609 ntTSL 1 (best) BASIC21.57■■□□□ 1.04
Otop1Q80VM9 Usf1-210ENSMUST00000167546 1822 ntAPPRIS P1 TSL 5 BASIC21.56■■□□□ 1.04
Otop1Q80VM9 Ntn5-203ENSMUST00000183120 1491 ntTSL 1 (best) BASIC21.56■■□□□ 1.04
Otop1Q80VM9 Lor-201ENSMUST00000058150 1779 ntAPPRIS P1 TSL 1 (best) BASIC21.56■■□□□ 1.04
Otop1Q80VM9 Cdkn2d-203ENSMUST00000215619 1423 ntAPPRIS P1 TSL 1 (best) BASIC21.55■■□□□ 1.04
Otop1Q80VM9 Anxa5-201ENSMUST00000029266 1731 ntAPPRIS P1 TSL 1 (best) BASIC21.55■■□□□ 1.04
Otop1Q80VM9 Camk2n2-201ENSMUST00000052939 1291 ntAPPRIS P1 TSL 1 (best) BASIC21.55■■□□□ 1.04
Otop1Q80VM9 Rpl34-201ENSMUST00000062601 624 ntAPPRIS P1 TSL 1 (best) BASIC21.55■■□□□ 1.04
Otop1Q80VM9 Ube2k-206ENSMUST00000201984 1449 ntTSL 3 BASIC21.55■■□□□ 1.04
Otop1Q80VM9 Cckbr-202ENSMUST00000181339 1326 ntTSL 1 (best) BASIC21.55■■□□□ 1.04
Otop1Q80VM9 AC153890.1-201ENSMUST00000220021 2469 ntBASIC21.54■■□□□ 1.04
Otop1Q80VM9 Fkbp1b-201ENSMUST00000020964 976 ntAPPRIS P1 TSL 1 (best) BASIC21.54■■□□□ 1.04
Otop1Q80VM9 Scand1-201ENSMUST00000079125 759 ntAPPRIS P1 TSL 1 (best) BASIC21.54■■□□□ 1.04
Otop1Q80VM9 Tsg101-201ENSMUST00000014546 1949 ntAPPRIS P1 TSL 1 (best) BASIC21.54■■□□□ 1.04
Otop1Q80VM9 Oaz2-206ENSMUST00000153700 1843 ntAPPRIS P2 TSL 5 BASIC21.53■■□□□ 1.04
Otop1Q80VM9 Kcna7-201ENSMUST00000107774 2182 ntAPPRIS P1 TSL 1 (best) BASIC21.53■■□□□ 1.04
Otop1Q80VM9 Cyp2r1-202ENSMUST00000119712 917 ntTSL 5 BASIC21.53■■□□□ 1.04
Otop1Q80VM9 Gt(ROSA)26Sor-201ENSMUST00000124246 1181 ntTSL 1 (best) BASIC21.53■■□□□ 1.04
Otop1Q80VM9 Eif5a-213ENSMUST00000164359 1281 ntAPPRIS P1 TSL 5 BASIC21.53■■□□□ 1.04
Otop1Q80VM9 Gm42501-201ENSMUST00000200220 1026 ntBASIC21.53■■□□□ 1.04
Otop1Q80VM9 A230005M16Rik-201ENSMUST00000137661 1605 ntTSL 1 (best) BASIC21.53■■□□□ 1.04
Otop1Q80VM9 Tmem238-201ENSMUST00000168578 1375 ntAPPRIS P1 TSL 1 (best) BASIC21.52■■□□□ 1.04
Otop1Q80VM9 Arpp19-206ENSMUST00000168301 599 ntTSL 5 BASIC21.52■■□□□ 1.04
Otop1Q80VM9 Gm20684-201ENSMUST00000176744 380 ntTSL 3 BASIC21.52■■□□□ 1.04
Otop1Q80VM9 March2-203ENSMUST00000172767 1381 ntAPPRIS P1 TSL 1 (best) BASIC21.51■■□□□ 1.03
Otop1Q80VM9 Ubp1-203ENSMUST00000116492 2111 ntAPPRIS ALT1 TSL 1 (best) BASIC21.51■■□□□ 1.03
Otop1Q80VM9 Fam168b-204ENSMUST00000170092 941 ntTSL 5 BASIC21.51■■□□□ 1.03
Otop1Q80VM9 Fam220a-206ENSMUST00000196487 2278 ntAPPRIS P1 TSL 1 (best) BASIC21.5■■□□□ 1.03
Otop1Q80VM9 Caap1-201ENSMUST00000030313 2107 ntAPPRIS P1 TSL 1 (best) BASIC21.5■■□□□ 1.03
Otop1Q80VM9 Fn1-208ENSMUST00000186940 1350 ntTSL 1 (best) BASIC21.5■■□□□ 1.03
Otop1Q80VM9 Gm16599-201ENSMUST00000148082 1182 ntTSL 1 (best) BASIC21.5■■□□□ 1.03
Otop1Q80VM9 Arx-202ENSMUST00000113947 2454 ntAPPRIS P1 TSL 1 (best) BASIC21.5■■□□□ 1.03
Otop1Q80VM9 Tmem150b-201ENSMUST00000086363 1341 ntAPPRIS P1 TSL 1 (best) BASIC21.5■■□□□ 1.03
Otop1Q80VM9 Mpnd-208ENSMUST00000159996 1444 ntAPPRIS ALT2 TSL 5 BASIC21.49■■□□□ 1.03
Otop1Q80VM9 Atp5a1-202ENSMUST00000114748 2674 ntTSL 1 (best) BASIC21.49■■□□□ 1.03
Otop1Q80VM9 Panx2-202ENSMUST00000161372 2314 ntTSL 1 (best) BASIC21.49■■□□□ 1.03
Otop1Q80VM9 Smox-205ENSMUST00000110182 985 ntTSL 1 (best) BASIC21.48■■□□□ 1.03
Otop1Q80VM9 Pde6d-203ENSMUST00000146220 879 ntTSL 2 BASIC21.48■■□□□ 1.03
Otop1Q80VM9 Pcf11-204ENSMUST00000208058 461 ntTSL 5 BASIC21.48■■□□□ 1.03
Otop1Q80VM9 Gm9959-201ENSMUST00000068277 390 ntBASIC21.48■■□□□ 1.03
Otop1Q80VM9 Gpr12-201ENSMUST00000036211 2219 ntAPPRIS P1 TSL 1 (best) BASIC21.48■■□□□ 1.03
Otop1Q80VM9 Hrh3-205ENSMUST00000165762 1368 ntAPPRIS ALT2 TSL 5 BASIC21.48■■□□□ 1.03
Otop1Q80VM9 Ablim1-208ENSMUST00000111544 2231 ntTSL 5 BASIC21.47■■□□□ 1.03
Otop1Q80VM9 Det1-201ENSMUST00000032839 2269 ntAPPRIS P1 TSL 1 (best) BASIC21.46■■□□□ 1.03
Otop1Q80VM9 Hoxc13-201ENSMUST00000001700 2461 ntAPPRIS P1 TSL 1 (best) BASIC21.46■■□□□ 1.03
Otop1Q80VM9 AC117769.4-201ENSMUST00000225679 685 ntBASIC21.46■■□□□ 1.03
Otop1Q80VM9 Gm9767-201ENSMUST00000041011 1193 ntAPPRIS P1 BASIC21.46■■□□□ 1.03
Retrieved 100 of 76,532 protein–RNA pairs in 28.3 ms