Protein–RNA interactions for Protein: Q80TE0

Rpap1, RNA polymerase II-associated protein 1, mousemouse

Predictions only

Length 1,409 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rpap1Q80TE0 Gm28040-202ENSMUST00000184603 890 ntAPPRIS P1 TSL 2 BASIC36■■■■□ 3.35
Rpap1Q80TE0 Asph-201ENSMUST00000038564 1174 ntTSL 1 (best) BASIC36■■■■□ 3.35
Rpap1Q80TE0 Scand1-201ENSMUST00000079125 759 ntAPPRIS P1 TSL 1 (best) BASIC36■■■■□ 3.35
Rpap1Q80TE0 Asph-205ENSMUST00000098275 1007 ntTSL 5 BASIC36■■■■□ 3.35
Rpap1Q80TE0 Gsk3a-202ENSMUST00000108411 2248 ntAPPRIS ALT2 TSL 5 BASIC36■■■■□ 3.35
Rpap1Q80TE0 0610009L18Rik-201ENSMUST00000143813 619 ntTSL 2 BASIC36■■■■□ 3.35
Rpap1Q80TE0 Gm45102-201ENSMUST00000207427 857 ntBASIC36■■■■□ 3.35
Rpap1Q80TE0 Pth1r-202ENSMUST00000166716 2219 ntAPPRIS P1 TSL 1 (best) BASIC35.99■■■■□ 3.35
Rpap1Q80TE0 Tmem238-201ENSMUST00000168578 1375 ntAPPRIS P1 TSL 1 (best) BASIC35.99■■■■□ 3.35
Rpap1Q80TE0 Pdcd4-203ENSMUST00000165617 1806 ntAPPRIS P1 TSL 1 (best) BASIC35.99■■■■□ 3.35
Rpap1Q80TE0 Arhgap39-204ENSMUST00000176219 542 ntTSL 5 BASIC35.99■■■■□ 3.35
Rpap1Q80TE0 Gm28417-202ENSMUST00000185881 538 ntTSL 3 BASIC35.99■■■■□ 3.35
Rpap1Q80TE0 Pcf11-204ENSMUST00000208058 461 ntTSL 5 BASIC35.99■■■■□ 3.35
Rpap1Q80TE0 Srcap-202ENSMUST00000098025 1257 ntTSL 5 BASIC35.99■■■■□ 3.35
Rpap1Q80TE0 Ssx2ip-202ENSMUST00000106149 2416 ntAPPRIS ALT2 TSL 1 (best) BASIC35.98■■■■□ 3.35
Rpap1Q80TE0 Cckbr-202ENSMUST00000181339 1326 ntTSL 1 (best) BASIC35.97■■■■□ 3.35
Rpap1Q80TE0 March5-202ENSMUST00000112391 1293 ntTSL 1 (best) BASIC35.97■■■■□ 3.35
Rpap1Q80TE0 Suv39h2-202ENSMUST00000060618 1831 ntTSL 1 (best) BASIC35.96■■■■□ 3.35
Rpap1Q80TE0 Gm960-202ENSMUST00000177696 2262 ntAPPRIS P2 TSL 5 BASIC35.96■■■■□ 3.35
Rpap1Q80TE0 Psip1-203ENSMUST00000107215 1898 ntTSL 1 (best) BASIC35.96■■■■□ 3.35
Rpap1Q80TE0 Smox-206ENSMUST00000110183 1159 ntTSL 1 (best) BASIC35.94■■■■□ 3.34
Rpap1Q80TE0 Mpnd-208ENSMUST00000159996 1444 ntAPPRIS ALT2 TSL 5 BASIC35.94■■■■□ 3.34
Rpap1Q80TE0 Kcnk2-205ENSMUST00000192723 1642 ntAPPRIS ALT1 TSL 1 (best) BASIC35.94■■■■□ 3.34
Rpap1Q80TE0 March2-203ENSMUST00000172767 1381 ntAPPRIS P1 TSL 1 (best) BASIC35.93■■■■□ 3.34
Rpap1Q80TE0 Rpl34-201ENSMUST00000062601 624 ntAPPRIS P1 TSL 1 (best) BASIC35.92■■■■□ 3.34
Rpap1Q80TE0 Upp2-202ENSMUST00000071543 2150 ntTSL 1 (best) BASIC35.92■■■■□ 3.34
Rpap1Q80TE0 Cdkn2d-203ENSMUST00000215619 1423 ntAPPRIS P1 TSL 1 (best) BASIC35.92■■■■□ 3.34
Rpap1Q80TE0 Gm20684-201ENSMUST00000176744 380 ntTSL 3 BASIC35.91■■■■□ 3.34
Rpap1Q80TE0 Tirap-205ENSMUST00000176685 1783 ntAPPRIS P1 TSL 1 (best) BASIC35.91■■■■□ 3.34
Rpap1Q80TE0 Gt(ROSA)26Sor-201ENSMUST00000124246 1181 ntTSL 1 (best) BASIC35.91■■■■□ 3.34
Rpap1Q80TE0 Vdac1-202ENSMUST00000102758 2022 ntAPPRIS P1 TSL 1 (best) BASIC35.88■■■■□ 3.33
Rpap1Q80TE0 Rps19-202ENSMUST00000108429 633 ntAPPRIS P1 TSL 2 BASIC35.88■■■■□ 3.33
Rpap1Q80TE0 Kdm2a-203ENSMUST00000116571 2413 ntTSL 1 (best) BASIC35.87■■■■□ 3.33
Rpap1Q80TE0 Dusp2-201ENSMUST00000028846 1617 ntAPPRIS P1 TSL 1 (best) BASIC35.87■■■■□ 3.33
Rpap1Q80TE0 Zfp346-203ENSMUST00000159278 1253 ntAPPRIS ALT2 TSL 5 BASIC35.87■■■■□ 3.33
Rpap1Q80TE0 Mypop-203ENSMUST00000131087 1951 ntAPPRIS P1 TSL 5 BASIC35.87■■■■□ 3.33
Rpap1Q80TE0 Tmem150b-201ENSMUST00000086363 1341 ntAPPRIS P1 TSL 1 (best) BASIC35.87■■■■□ 3.33
Rpap1Q80TE0 Hist2h3c1-201ENSMUST00000176059 1820 ntAPPRIS P1 BASIC35.86■■■■□ 3.33
Rpap1Q80TE0 Hist2h3c1-202ENSMUST00000177796 1825 ntBASIC35.86■■■■□ 3.33
Rpap1Q80TE0 C1qtnf5-203ENSMUST00000114818 1337 ntAPPRIS P1 TSL 5 BASIC35.85■■■■□ 3.33
Rpap1Q80TE0 Fam168b-204ENSMUST00000170092 941 ntTSL 5 BASIC35.84■■■■□ 3.33
Rpap1Q80TE0 Fkbp1b-201ENSMUST00000020964 976 ntAPPRIS P1 TSL 1 (best) BASIC35.84■■■■□ 3.33
Rpap1Q80TE0 B230377A18Rik-202ENSMUST00000192921 1364 ntBASIC35.84■■■■□ 3.33
Rpap1Q80TE0 Gsc2-201ENSMUST00000012279 1172 ntAPPRIS P1 TSL 1 (best) BASIC35.83■■■■□ 3.33
Rpap1Q80TE0 Arpp19-206ENSMUST00000168301 599 ntTSL 5 BASIC35.83■■■■□ 3.33
Rpap1Q80TE0 Gm9959-201ENSMUST00000068277 390 ntBASIC35.83■■■■□ 3.33
Rpap1Q80TE0 Fn1-208ENSMUST00000186940 1350 ntTSL 1 (best) BASIC35.82■■■■□ 3.33
Rpap1Q80TE0 Thra-202ENSMUST00000103139 2246 ntAPPRIS P1 TSL 1 (best) BASIC35.82■■■■□ 3.33
Rpap1Q80TE0 Tmem106c-201ENSMUST00000064200 1635 ntAPPRIS P1 TSL 1 (best) BASIC35.82■■■■□ 3.32
Rpap1Q80TE0 Tmem11-201ENSMUST00000062677 1457 ntAPPRIS P1 TSL 1 (best) BASIC35.81■■■■□ 3.32
Rpap1Q80TE0 Pde6d-203ENSMUST00000146220 879 ntTSL 2 BASIC35.81■■■■□ 3.32
Rpap1Q80TE0 Eif5a-213ENSMUST00000164359 1281 ntAPPRIS P1 TSL 5 BASIC35.8■■■■□ 3.32
Rpap1Q80TE0 AC117769.4-201ENSMUST00000225679 685 ntBASIC35.8■■■■□ 3.32
Rpap1Q80TE0 Runx2-211ENSMUST00000162629 1607 ntAPPRIS ALT2 TSL 5 BASIC35.8■■■■□ 3.32
Rpap1Q80TE0 Hrh3-205ENSMUST00000165762 1368 ntAPPRIS ALT2 TSL 5 BASIC35.79■■■■□ 3.32
Rpap1Q80TE0 Pgls-205ENSMUST00000143441 1062 ntTSL 3 BASIC35.79■■■■□ 3.32
Rpap1Q80TE0 Gm9767-201ENSMUST00000041011 1193 ntAPPRIS P1 BASIC35.79■■■■□ 3.32
Rpap1Q80TE0 Sox17-202ENSMUST00000116652 1512 ntAPPRIS P1 TSL 1 (best) BASIC35.78■■■■□ 3.32
Rpap1Q80TE0 Pdpk1-203ENSMUST00000115407 1730 ntTSL 5 BASIC35.78■■■■□ 3.32
Rpap1Q80TE0 Tmem70-203ENSMUST00000177501 1636 ntAPPRIS P3 TSL 1 (best) BASIC35.77■■■■□ 3.32
Rpap1Q80TE0 Fgf16-201ENSMUST00000033581 1645 ntAPPRIS P1 TSL 1 (best) BASIC35.77■■■■□ 3.32
Rpap1Q80TE0 Scn1b-201ENSMUST00000098548 1573 ntAPPRIS P1 TSL 1 (best) BASIC35.76■■■■□ 3.32
Rpap1Q80TE0 Glrx3-201ENSMUST00000064404 1685 ntAPPRIS P2 TSL 1 (best) BASIC35.76■■■■□ 3.31
Rpap1Q80TE0 Gm42501-201ENSMUST00000200220 1026 ntBASIC35.75■■■■□ 3.31
Rpap1Q80TE0 Ctxn1-201ENSMUST00000053252 1212 ntAPPRIS P1 TSL 1 (best) BASIC35.75■■■■□ 3.31
Rpap1Q80TE0 Hdgf-201ENSMUST00000005017 2245 ntAPPRIS P1 TSL 1 (best) BASIC35.75■■■■□ 3.31
Rpap1Q80TE0 Smox-205ENSMUST00000110182 985 ntTSL 1 (best) BASIC35.74■■■■□ 3.31
Rpap1Q80TE0 Fgf8-206ENSMUST00000111928 1056 ntTSL 1 (best) BASIC35.74■■■■□ 3.31
Rpap1Q80TE0 Susd3-203ENSMUST00000119721 1249 ntAPPRIS ALT2 TSL 1 (best) BASIC35.74■■■■□ 3.31
Rpap1Q80TE0 Ints11-202ENSMUST00000120794 1884 ntTSL 5 BASIC35.74■■■■□ 3.31
Rpap1Q80TE0 Amer2-203ENSMUST00000225247 2662 ntBASIC35.74■■■■□ 3.31
Rpap1Q80TE0 Gm45095-201ENSMUST00000206736 254 ntTSL 5 BASIC35.74■■■■□ 3.31
Rpap1Q80TE0 Hoxd9-201ENSMUST00000059272 2136 ntAPPRIS P1 TSL 1 (best) BASIC35.73■■■■□ 3.31
Rpap1Q80TE0 Ppia-202ENSMUST00000132846 1170 ntAPPRIS P1 TSL 1 (best) BASIC35.73■■■■□ 3.31
Rpap1Q80TE0 Btg3-201ENSMUST00000023570 1414 ntAPPRIS P1 TSL 1 (best) BASIC35.72■■■■□ 3.31
Rpap1Q80TE0 1700016K19Rik-201ENSMUST00000066408 921 ntAPPRIS P1 TSL 1 (best) BASIC35.72■■■■□ 3.31
Rpap1Q80TE0 Tmem55b-209ENSMUST00000162957 1465 ntTSL 1 (best) BASIC35.72■■■■□ 3.31
Rpap1Q80TE0 Mpnd-209ENSMUST00000162883 1400 ntTSL 5 BASIC35.71■■■■□ 3.31
Rpap1Q80TE0 1700065D16Rik-202ENSMUST00000188975 506 ntTSL 3 BASIC35.71■■■■□ 3.31
Rpap1Q80TE0 Ndfip1-201ENSMUST00000025293 930 ntAPPRIS P1 TSL 1 (best) BASIC35.71■■■■□ 3.31
Rpap1Q80TE0 Ppp1cb-206ENSMUST00000202078 383 ntTSL 5 BASIC35.7■■■■□ 3.31
Rpap1Q80TE0 Vcpkmt-201ENSMUST00000058639 1027 ntAPPRIS P1 TSL 1 (best) BASIC35.7■■■■□ 3.31
Rpap1Q80TE0 Gm20208-202ENSMUST00000219905 1528 ntTSL 1 (best) BASIC35.7■■■■□ 3.31
Rpap1Q80TE0 Tmem150a-202ENSMUST00000132243 1478 ntTSL 5 BASIC35.69■■■■□ 3.3
Rpap1Q80TE0 Metrnl-201ENSMUST00000036742 1401 ntAPPRIS P2 TSL 1 (best) BASIC35.69■■■■□ 3.3
Rpap1Q80TE0 Pde8b-204ENSMUST00000159608 2370 ntTSL 5 BASIC35.68■■■■□ 3.3
Rpap1Q80TE0 Gm18755-201ENSMUST00000218030 1099 ntBASIC35.68■■■■□ 3.3
Rpap1Q80TE0 Ech1-201ENSMUST00000066264 1267 ntAPPRIS P1 TSL 1 (best) BASIC35.68■■■■□ 3.3
Rpap1Q80TE0 Adap1-201ENSMUST00000110865 2557 ntAPPRIS P1 TSL 5 BASIC35.68■■■■□ 3.3
Rpap1Q80TE0 Kcnj6-201ENSMUST00000095873 1773 ntTSL 1 (best) BASIC35.68■■■■□ 3.3
Rpap1Q80TE0 Cdc42ep5-201ENSMUST00000076831 1025 ntAPPRIS P1 TSL 1 (best) BASIC35.67■■■■□ 3.3
Rpap1Q80TE0 Pdf-201ENSMUST00000055316 1306 ntAPPRIS P1 TSL 1 (best) BASIC35.67■■■■□ 3.3
Rpap1Q80TE0 Tmem235-201ENSMUST00000093905 1820 ntAPPRIS P1 TSL 5 BASIC35.67■■■■□ 3.3
Rpap1Q80TE0 Barx1-201ENSMUST00000021813 1399 ntAPPRIS P1 TSL 1 (best) BASIC35.66■■■■□ 3.3
Rpap1Q80TE0 Ccna1-202ENSMUST00000197238 1719 ntAPPRIS P1 TSL 5 BASIC35.66■■■■□ 3.3
Rpap1Q80TE0 Slc16a11-207ENSMUST00000136328 1403 ntTSL 5 BASIC35.66■■■■□ 3.3
Rpap1Q80TE0 Tmem120b-202ENSMUST00000111619 1256 ntTSL 1 (best) BASIC35.66■■■■□ 3.3
Rpap1Q80TE0 Sds-204ENSMUST00000201684 1288 ntAPPRIS P1 TSL 5 BASIC35.66■■■■□ 3.3
Rpap1Q80TE0 A430027H14Rik-201ENSMUST00000191809 1467 ntBASIC35.65■■■■□ 3.3
Rpap1Q80TE0 Gxylt1-202ENSMUST00000057896 1891 ntAPPRIS ALT2 TSL 5 BASIC35.63■■■■□ 3.29
Retrieved 100 of 76,532 protein–RNA pairs in 62 ms