Protein–RNA interactions for Protein: Q80T79

Csmd3, CUB and sushi domain-containing protein 3, mousemouse

Predictions only

Length 3,707 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Csmd3Q80T79 Ybx3-202ENSMUST00000087865 1684 ntAPPRIS ALT2 TSL 1 (best) BASIC15.94■□□□□ 0.14
Csmd3Q80T79 Nrg3-202ENSMUST00000168810 2175 ntAPPRIS ALT2 TSL 1 (best) BASIC15.94■□□□□ 0.14
Csmd3Q80T79 Lsm4-205ENSMUST00000210987 636 ntTSL 5 BASIC15.94■□□□□ 0.14
Csmd3Q80T79 Cetn4-201ENSMUST00000071400 1808 ntTSL 5 BASIC15.93■□□□□ 0.14
Csmd3Q80T79 Ppp1ca-201ENSMUST00000046094 1379 ntAPPRIS P1 TSL 1 (best) BASIC15.93■□□□□ 0.14
Csmd3Q80T79 Ntn5-203ENSMUST00000183120 1491 ntTSL 1 (best) BASIC15.93■□□□□ 0.14
Csmd3Q80T79 Usf1-210ENSMUST00000167546 1822 ntAPPRIS P1 TSL 5 BASIC15.93■□□□□ 0.14
Csmd3Q80T79 Mapk1-203ENSMUST00000115731 1747 ntAPPRIS P1 TSL 1 (best) BASIC15.92■□□□□ 0.14
Csmd3Q80T79 Socs1-201ENSMUST00000038099 1220 ntAPPRIS P1 TSL 1 (best) BASIC15.92■□□□□ 0.14
Csmd3Q80T79 Ncoa7-206ENSMUST00000215725 1445 ntTSL 1 (best) BASIC15.92■□□□□ 0.14
Csmd3Q80T79 Arhgap39-204ENSMUST00000176219 542 ntTSL 5 BASIC15.91■□□□□ 0.14
Csmd3Q80T79 4921531C22Rik-201ENSMUST00000150145 1905 ntTSL 1 (best) BASIC15.91■□□□□ 0.14
Csmd3Q80T79 Mpnd-209ENSMUST00000162883 1400 ntTSL 5 BASIC15.91■□□□□ 0.14
Csmd3Q80T79 Gm43445-201ENSMUST00000198564 2091 ntBASIC15.91■□□□□ 0.14
Csmd3Q80T79 Zfp358-201ENSMUST00000061508 1999 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
Csmd3Q80T79 AC153504.1-201ENSMUST00000218379 2290 ntBASIC15.9■□□□□ 0.14
Csmd3Q80T79 Hmg20b-203ENSMUST00000105324 1540 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
Csmd3Q80T79 Fam196a-201ENSMUST00000171394 2490 ntAPPRIS P1 TSL 5 BASIC15.9■□□□□ 0.14
Csmd3Q80T79 Eif5a-213ENSMUST00000164359 1281 ntAPPRIS P1 TSL 5 BASIC15.9■□□□□ 0.14
Csmd3Q80T79 Pdf-201ENSMUST00000055316 1306 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
Csmd3Q80T79 D17Wsu92e-201ENSMUST00000075076 1470 ntTSL 1 (best) BASIC15.89■□□□□ 0.13
Csmd3Q80T79 Bex1-201ENSMUST00000058125 866 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
Csmd3Q80T79 Vmac-201ENSMUST00000067931 2174 ntAPPRIS P3 TSL 1 (best) BASIC15.89■□□□□ 0.13
Csmd3Q80T79 Gm28417-202ENSMUST00000185881 538 ntTSL 3 BASIC15.89■□□□□ 0.13
Csmd3Q80T79 Sac3d1-201ENSMUST00000113533 1374 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
Csmd3Q80T79 Gm20458-201ENSMUST00000164863 1369 ntAPPRIS P1 TSL 5 BASIC15.89■□□□□ 0.13
Csmd3Q80T79 D730045B01Rik-202ENSMUST00000186838 1543 ntTSL 1 (best) BASIC15.89■□□□□ 0.13
Csmd3Q80T79 Gsk3a-201ENSMUST00000071739 2260 ntAPPRIS P2 TSL 2 BASIC15.89■□□□□ 0.13
Csmd3Q80T79 Ltb-203ENSMUST00000173600 905 ntAPPRIS ALT2 TSL 5 BASIC15.89■□□□□ 0.13
Csmd3Q80T79 Gm5297-201ENSMUST00000198555 1171 ntBASIC15.88■□□□□ 0.13
Csmd3Q80T79 H2afy-202ENSMUST00000045788 1933 ntTSL 1 (best) BASIC15.88■□□□□ 0.13
Csmd3Q80T79 4833418N17Rik-201ENSMUST00000064826 615 ntBASIC15.88■□□□□ 0.13
Csmd3Q80T79 Tlx2-201ENSMUST00000089641 1236 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
Csmd3Q80T79 E130218I03Rik-208ENSMUST00000144222 1729 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
Csmd3Q80T79 Ctbp1-201ENSMUST00000079746 2279 ntAPPRIS P3 TSL 1 (best) BASIC15.87■□□□□ 0.13
Csmd3Q80T79 Eif5a-210ENSMUST00000108613 1343 ntAPPRIS P1 TSL 1 (best) BASIC15.87■□□□□ 0.13
Csmd3Q80T79 Gm9767-201ENSMUST00000041011 1193 ntAPPRIS P1 BASIC15.87■□□□□ 0.13
Csmd3Q80T79 Kcnip3-202ENSMUST00000088538 1296 ntAPPRIS P1 TSL 1 (best) BASIC15.87■□□□□ 0.13
Csmd3Q80T79 Rps2-ps6-201ENSMUST00000095471 855 ntBASIC15.87■□□□□ 0.13
Csmd3Q80T79 Hdgf-201ENSMUST00000005017 2245 ntAPPRIS P1 TSL 1 (best) BASIC15.87■□□□□ 0.13
Csmd3Q80T79 Mpnd-208ENSMUST00000159996 1444 ntAPPRIS ALT2 TSL 5 BASIC15.86■□□□□ 0.13
Csmd3Q80T79 Nkain1-201ENSMUST00000105993 1202 ntAPPRIS P1 TSL 1 (best) BASIC15.86■□□□□ 0.13
Csmd3Q80T79 Tor2a-208ENSMUST00000177382 396 ntTSL 5 BASIC15.86■□□□□ 0.13
Csmd3Q80T79 Ndfip1-201ENSMUST00000025293 930 ntAPPRIS P1 TSL 1 (best) BASIC15.86■□□□□ 0.13
Csmd3Q80T79 Micu3-201ENSMUST00000068999 2219 ntAPPRIS P1 TSL 5 BASIC15.86■□□□□ 0.13
Csmd3Q80T79 Fam168b-204ENSMUST00000170092 941 ntTSL 5 BASIC15.86■□□□□ 0.13
Csmd3Q80T79 Zxda-201ENSMUST00000117281 2621 ntBASIC15.86■□□□□ 0.13
Csmd3Q80T79 Hrh3-205ENSMUST00000165762 1368 ntAPPRIS ALT2 TSL 5 BASIC15.85■□□□□ 0.13
Csmd3Q80T79 Det1-201ENSMUST00000032839 2269 ntAPPRIS P1 TSL 1 (best) BASIC15.85■□□□□ 0.13
Csmd3Q80T79 Kctd2-201ENSMUST00000103035 1764 ntAPPRIS P1 TSL 1 (best) BASIC15.85■□□□□ 0.13
Csmd3Q80T79 Caap1-201ENSMUST00000030313 2107 ntAPPRIS P1 TSL 1 (best) BASIC15.85■□□□□ 0.13
Csmd3Q80T79 Amer2-203ENSMUST00000225247 2662 ntBASIC15.84■□□□□ 0.13
Csmd3Q80T79 March5-202ENSMUST00000112391 1293 ntTSL 1 (best) BASIC15.84■□□□□ 0.13
Csmd3Q80T79 Prr7-201ENSMUST00000046533 1359 ntAPPRIS P1 TSL 1 (best) BASIC15.84■□□□□ 0.13
Csmd3Q80T79 Gm45095-201ENSMUST00000206736 254 ntTSL 5 BASIC15.83■□□□□ 0.13
Csmd3Q80T79 Suds3-201ENSMUST00000086471 2425 ntAPPRIS P3 TSL 1 (best) BASIC15.83■□□□□ 0.12
Csmd3Q80T79 Jmjd6-201ENSMUST00000047616 1668 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.12
Csmd3Q80T79 Gm42501-201ENSMUST00000200220 1026 ntBASIC15.83■□□□□ 0.12
Csmd3Q80T79 4930524J08Rik-201ENSMUST00000046721 603 ntAPPRIS P1 BASIC15.83■□□□□ 0.12
Csmd3Q80T79 Gm10837-201ENSMUST00000100294 1536 ntAPPRIS P1 BASIC15.83■□□□□ 0.12
Csmd3Q80T79 Anp32e-210ENSMUST00000171368 878 ntTSL 3 BASIC15.83■□□□□ 0.12
Csmd3Q80T79 Copz2-201ENSMUST00000018816 930 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.12
Csmd3Q80T79 Gm44428-201ENSMUST00000204474 874 ntBASIC15.83■□□□□ 0.12
Csmd3Q80T79 Gsc2-201ENSMUST00000012279 1172 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
Csmd3Q80T79 Etf1-202ENSMUST00000180351 108 ntBASIC15.82■□□□□ 0.12
Csmd3Q80T79 Vegfb-201ENSMUST00000025914 1281 ntAPPRIS P3 TSL 1 (best) BASIC15.82■□□□□ 0.12
Csmd3Q80T79 Gm10232-201ENSMUST00000089221 720 ntBASIC15.82■□□□□ 0.12
Csmd3Q80T79 Fn1-208ENSMUST00000186940 1350 ntTSL 1 (best) BASIC15.82■□□□□ 0.12
Csmd3Q80T79 Anxa5-201ENSMUST00000029266 1731 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
Csmd3Q80T79 Hoxd11-202ENSMUST00000142312 1111 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
Csmd3Q80T79 Gm21989-201ENSMUST00000174530 1609 ntTSL 1 (best) BASIC15.82■□□□□ 0.12
Csmd3Q80T79 Kdm2a-203ENSMUST00000116571 2413 ntTSL 1 (best) BASIC15.81■□□□□ 0.12
Csmd3Q80T79 Bcl7b-201ENSMUST00000031692 1758 ntAPPRIS P2 TSL 1 (best) BASIC15.81■□□□□ 0.12
Csmd3Q80T79 Ctxn1-201ENSMUST00000053252 1212 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
Csmd3Q80T79 4930527J03Rik-201ENSMUST00000094270 543 ntBASIC15.81■□□□□ 0.12
Csmd3Q80T79 Jmy-202ENSMUST00000220513 1843 ntTSL 1 (best) BASIC15.81■□□□□ 0.12
Csmd3Q80T79 Ywhaz-204ENSMUST00000110362 2122 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
Csmd3Q80T79 Rbm45-201ENSMUST00000046389 1898 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
Csmd3Q80T79 Ptms-201ENSMUST00000032216 1149 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
Csmd3Q80T79 Serp2-201ENSMUST00000064517 748 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
Csmd3Q80T79 Selenof-201ENSMUST00000082437 1514 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
Csmd3Q80T79 Scn1b-201ENSMUST00000098548 1573 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
Csmd3Q80T79 Hebp2-202ENSMUST00000213153 968 ntTSL 1 (best) BASIC15.8■□□□□ 0.12
Csmd3Q80T79 Hist2h2ab-201ENSMUST00000073115 444 ntAPPRIS P1 BASIC15.8■□□□□ 0.12
Csmd3Q80T79 Nt5m-201ENSMUST00000102695 1306 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
Csmd3Q80T79 Snrpb-201ENSMUST00000103199 1161 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
Csmd3Q80T79 Fam96b-203ENSMUST00000164884 918 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
Csmd3Q80T79 Gm21956-201ENSMUST00000179946 522 ntBASIC15.79■□□□□ 0.12
Csmd3Q80T79 Marcksl1-201ENSMUST00000062356 1605 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
Csmd3Q80T79 Tmem55b-209ENSMUST00000162957 1465 ntTSL 1 (best) BASIC15.79■□□□□ 0.12
Csmd3Q80T79 Timm50-201ENSMUST00000081946 1515 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
Csmd3Q80T79 Txnrd2-201ENSMUST00000115604 1235 ntTSL 1 (best) BASIC15.79■□□□□ 0.12
Csmd3Q80T79 Gm35161-201ENSMUST00000221765 941 ntTSL 5 BASIC15.78■□□□□ 0.12
Csmd3Q80T79 Ryk-201ENSMUST00000035142 2852 ntAPPRIS ALT2 TSL 1 (best) BASIC15.77■□□□□ 0.12
Csmd3Q80T79 Acvr2b-201ENSMUST00000035093 1729 ntTSL 5 BASIC15.77■□□□□ 0.12
Csmd3Q80T79 Pdss1-207ENSMUST00000152170 1538 ntTSL 1 (best) BASIC15.77■□□□□ 0.12
Csmd3Q80T79 Ppia-202ENSMUST00000132846 1170 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.12
Csmd3Q80T79 Svbp-201ENSMUST00000030395 733 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.12
Csmd3Q80T79 Btg3-201ENSMUST00000023570 1414 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.11
Csmd3Q80T79 Metrnl-201ENSMUST00000036742 1401 ntAPPRIS P2 TSL 1 (best) BASIC15.77■□□□□ 0.11
Retrieved 100 of 76,532 protein–RNA pairs in 66.3 ms