Protein–RNA interactions for Protein: Q6PR54

Rif1, Telomere-associated protein RIF1, mousemouse

Known RBP Predictions only

Length 2,419 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rif1Q6PR54 Gm18284-201ENSMUST00000172604 624 ntBASIC19.54■□□□□ 0.72
Rif1Q6PR54 Tmem191c-213ENSMUST00000164950 1394 ntAPPRIS P1 TSL 3 BASIC19.54■□□□□ 0.72
Rif1Q6PR54 Kras-202ENSMUST00000111710 1194 ntTSL 5 BASIC19.54■□□□□ 0.72
Rif1Q6PR54 Gm12821-201ENSMUST00000120022 600 ntBASIC19.54■□□□□ 0.72
Rif1Q6PR54 Lgals7-201ENSMUST00000081457 754 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
Rif1Q6PR54 Cys1-203ENSMUST00000156453 1732 ntAPPRIS P1 TSL 2 BASIC19.52■□□□□ 0.72
Rif1Q6PR54 Spr-203ENSMUST00000174769 1029 ntTSL 1 (best) BASIC19.52■□□□□ 0.72
Rif1Q6PR54 E2f5-202ENSMUST00000165922 1751 ntAPPRIS ALT2 TSL 5 BASIC19.52■□□□□ 0.72
Rif1Q6PR54 Smad2-202ENSMUST00000091831 1645 ntAPPRIS ALT1 TSL 5 BASIC19.52■□□□□ 0.72
Rif1Q6PR54 Lsm4-205ENSMUST00000210987 636 ntTSL 5 BASIC19.52■□□□□ 0.71
Rif1Q6PR54 Gm10837-201ENSMUST00000100294 1536 ntAPPRIS P1 BASIC19.51■□□□□ 0.71
Rif1Q6PR54 Dgcr6-207ENSMUST00000151266 1086 ntAPPRIS ALT1 TSL 1 (best) BASIC19.51■□□□□ 0.71
Rif1Q6PR54 1110065P20Rik-206ENSMUST00000185036 1223 ntTSL 2 BASIC19.51■□□□□ 0.71
Rif1Q6PR54 Cacna2d1-207ENSMUST00000196750 1272 ntTSL 1 (best) BASIC19.51■□□□□ 0.71
Rif1Q6PR54 Gm20458-201ENSMUST00000164863 1369 ntAPPRIS P1 TSL 5 BASIC19.51■□□□□ 0.71
Rif1Q6PR54 Fads2-201ENSMUST00000025567 1508 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
Rif1Q6PR54 3110021N24Rik-201ENSMUST00000178992 1812 ntAPPRIS P1 TSL 5 BASIC19.51■□□□□ 0.71
Rif1Q6PR54 Hsd17b11-201ENSMUST00000031251 1825 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
Rif1Q6PR54 C1qtnf5-204ENSMUST00000114821 1365 ntAPPRIS P1 TSL 2 BASIC19.51■□□□□ 0.71
Rif1Q6PR54 Pet117-201ENSMUST00000183618 693 ntAPPRIS P1 TSL 2 BASIC19.51■□□□□ 0.71
Rif1Q6PR54 Selenof-201ENSMUST00000082437 1514 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
Rif1Q6PR54 Tm2d1-202ENSMUST00000102793 1027 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
Rif1Q6PR54 0610010K14Rik-209ENSMUST00000108579 667 ntTSL 1 (best) BASIC19.5■□□□□ 0.71
Rif1Q6PR54 Psmg4-202ENSMUST00000147632 555 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
Rif1Q6PR54 Gm29394-204ENSMUST00000177504 448 ntAPPRIS ALT2 TSL 3 BASIC19.5■□□□□ 0.71
Rif1Q6PR54 4930539J05Rik-202ENSMUST00000182865 511 ntTSL 2 BASIC19.5■□□□□ 0.71
Rif1Q6PR54 Pdss1-207ENSMUST00000152170 1538 ntTSL 1 (best) BASIC19.5■□□□□ 0.71
Rif1Q6PR54 Hoxd3os1-204ENSMUST00000156342 796 ntTSL 1 (best) BASIC19.5■□□□□ 0.71
Rif1Q6PR54 Bag1-204ENSMUST00000215842 1068 ntAPPRIS P3 TSL 1 (best) BASIC19.49■□□□□ 0.71
Rif1Q6PR54 Kcnip2-201ENSMUST00000026247 1203 ntAPPRIS ALT1 TSL 5 BASIC19.49■□□□□ 0.71
Rif1Q6PR54 Kcnk15-201ENSMUST00000044798 1199 ntAPPRIS P2 TSL 1 (best) BASIC19.49■□□□□ 0.71
Rif1Q6PR54 2810025M15Rik-201ENSMUST00000061537 1194 ntTSL 1 (best) BASIC19.49■□□□□ 0.71
Rif1Q6PR54 Sarnp-201ENSMUST00000105230 918 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
Rif1Q6PR54 Tmem114-201ENSMUST00000023400 1406 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
Rif1Q6PR54 Ntn5-203ENSMUST00000183120 1491 ntTSL 1 (best) BASIC19.48■□□□□ 0.71
Rif1Q6PR54 Ywhah-201ENSMUST00000019109 1764 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
Rif1Q6PR54 Cadm1-206ENSMUST00000143026 1643 ntTSL 5 BASIC19.48■□□□□ 0.71
Rif1Q6PR54 Gm10382-201ENSMUST00000100700 1233 ntAPPRIS P1 BASIC19.47■□□□□ 0.71
Rif1Q6PR54 Dapk3-201ENSMUST00000047665 1676 ntAPPRIS P1 TSL 5 BASIC19.47■□□□□ 0.71
Rif1Q6PR54 Ethe1-201ENSMUST00000077191 1484 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
Rif1Q6PR54 Ccdc84-212ENSMUST00000217351 888 ntTSL 3 BASIC19.46■□□□□ 0.71
Rif1Q6PR54 Gfra4-201ENSMUST00000028787 909 ntAPPRIS P3 TSL 1 (best) BASIC19.46■□□□□ 0.71
Rif1Q6PR54 Prr5-201ENSMUST00000065499 1830 ntAPPRIS P3 TSL 1 (best) BASIC19.46■□□□□ 0.71
Rif1Q6PR54 Hmg20b-202ENSMUST00000105323 1463 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
Rif1Q6PR54 Rap1a-202ENSMUST00000197094 782 ntTSL 3 BASIC19.44■□□□□ 0.7
Rif1Q6PR54 Gm26588-201ENSMUST00000181064 2098 ntTSL 1 (best) BASIC19.44■□□□□ 0.7
Rif1Q6PR54 Mpnd-208ENSMUST00000159996 1444 ntAPPRIS ALT2 TSL 5 BASIC19.44■□□□□ 0.7
Rif1Q6PR54 Akt1s1-203ENSMUST00000107882 1160 ntAPPRIS ALT2 TSL 3 BASIC19.44■□□□□ 0.7
Rif1Q6PR54 Gm27011-201ENSMUST00000182352 972 ntBASIC19.44■□□□□ 0.7
Rif1Q6PR54 Acad9-205ENSMUST00000196648 552 ntTSL 3 BASIC19.44■□□□□ 0.7
Rif1Q6PR54 Efna3-203ENSMUST00000200436 742 ntAPPRIS ALT2 TSL 5 BASIC19.44■□□□□ 0.7
Rif1Q6PR54 Gm46212-201ENSMUST00000220256 1003 ntTSL 5 BASIC19.44■□□□□ 0.7
Rif1Q6PR54 Gm45417-201ENSMUST00000209533 758 ntBASIC19.43■□□□□ 0.7
Rif1Q6PR54 Ankrd11-207ENSMUST00000212937 943 ntTSL 1 (best) BASIC19.43■□□□□ 0.7
Rif1Q6PR54 Plekhj1-201ENSMUST00000036805 1260 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
Rif1Q6PR54 Proca1-201ENSMUST00000060539 960 ntAPPRIS ALT2 TSL 2 BASIC19.43■□□□□ 0.7
Rif1Q6PR54 Tmem120a-201ENSMUST00000043378 1559 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
Rif1Q6PR54 Nkx6-2-202ENSMUST00000106095 1299 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
Rif1Q6PR54 Rtl10-201ENSMUST00000146673 865 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
Rif1Q6PR54 Tspan33-201ENSMUST00000046750 1994 ntAPPRIS P3 TSL 1 (best) BASIC19.43■□□□□ 0.7
Rif1Q6PR54 Srsf6-202ENSMUST00000126163 515 ntTSL 5 BASIC19.42■□□□□ 0.7
Rif1Q6PR54 Gm5131-201ENSMUST00000212776 1238 ntBASIC19.42■□□□□ 0.7
Rif1Q6PR54 Fam69b-201ENSMUST00000074240 1622 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
Rif1Q6PR54 Gsc2-201ENSMUST00000012279 1172 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
Rif1Q6PR54 Gm37564-201ENSMUST00000195000 330 ntTSL 5 BASIC19.42■□□□□ 0.7
Rif1Q6PR54 Ltb-201ENSMUST00000025262 1160 ntAPPRIS P2 TSL 1 (best) BASIC19.42■□□□□ 0.7
Rif1Q6PR54 Tmco6-201ENSMUST00000007046 1817 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
Rif1Q6PR54 Gm28731-201ENSMUST00000185564 1569 ntBASIC19.41■□□□□ 0.7
Rif1Q6PR54 Usp2-206ENSMUST00000176416 1486 ntAPPRIS ALT2 TSL 1 (best) BASIC19.41■□□□□ 0.7
Rif1Q6PR54 Nt5c3-201ENSMUST00000031793 1676 ntAPPRIS P3 TSL 1 (best) BASIC19.4■□□□□ 0.7
Rif1Q6PR54 Hmx3-201ENSMUST00000046093 1457 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
Rif1Q6PR54 Hmgn2-204ENSMUST00000105893 973 ntTSL 3 BASIC19.4■□□□□ 0.7
Rif1Q6PR54 Xpa-202ENSMUST00000058232 1241 ntAPPRIS ALT2 TSL 1 (best) BASIC19.4■□□□□ 0.7
Rif1Q6PR54 Gm9905-201ENSMUST00000065740 1845 ntBASIC19.39■□□□□ 0.7
Rif1Q6PR54 Nog-201ENSMUST00000061728 1695 ntAPPRIS P1 BASIC19.39■□□□□ 0.7
Rif1Q6PR54 Hdac3-201ENSMUST00000043498 2004 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
Rif1Q6PR54 Rab24-201ENSMUST00000035242 1168 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
Rif1Q6PR54 Pusl1-201ENSMUST00000097737 1243 ntAPPRIS P1 TSL 5 BASIC19.39■□□□□ 0.69
Rif1Q6PR54 Ppp1r3e-201ENSMUST00000168622 1852 ntAPPRIS P1 TSL 5 BASIC19.39■□□□□ 0.69
Rif1Q6PR54 Snhg6-203ENSMUST00000182580 473 ntTSL 1 (best) BASIC19.39■□□□□ 0.69
Rif1Q6PR54 Gm45095-201ENSMUST00000206736 254 ntTSL 5 BASIC19.39■□□□□ 0.69
Rif1Q6PR54 Gm26881-201ENSMUST00000180426 593 ntTSL 1 (best) BASIC19.37■□□□□ 0.69
Rif1Q6PR54 Atp6v1f-201ENSMUST00000004396 703 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
Rif1Q6PR54 Gm2415-201ENSMUST00000128982 1474 ntTSL 1 (best) BASIC19.37■□□□□ 0.69
Rif1Q6PR54 Ipmk-203ENSMUST00000121446 1492 ntAPPRIS ALT2 TSL 5 BASIC19.37■□□□□ 0.69
Rif1Q6PR54 AB124611-203ENSMUST00000173769 1188 ntAPPRIS P3 TSL 1 (best) BASIC19.37■□□□□ 0.69
Rif1Q6PR54 Gm6658-202ENSMUST00000209493 1885 ntBASIC19.37■□□□□ 0.69
Rif1Q6PR54 Terc-201ENSMUST00000082862 423 ntBASIC19.36■□□□□ 0.69
Rif1Q6PR54 Arhgap39-204ENSMUST00000176219 542 ntTSL 5 BASIC19.36■□□□□ 0.69
Rif1Q6PR54 Gm2011-201ENSMUST00000203124 1263 ntBASIC19.36■□□□□ 0.69
Rif1Q6PR54 Far2os2-201ENSMUST00000149815 980 ntTSL 1 (best) BASIC19.35■□□□□ 0.69
Rif1Q6PR54 Gm11586-201ENSMUST00000123060 566 ntTSL 2 BASIC19.34■□□□□ 0.69
Rif1Q6PR54 Gm35065-201ENSMUST00000199206 428 ntTSL 3 BASIC19.34■□□□□ 0.69
Rif1Q6PR54 Tmem55b-209ENSMUST00000162957 1465 ntTSL 1 (best) BASIC19.34■□□□□ 0.69
Rif1Q6PR54 Rhno1-202ENSMUST00000112151 1108 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
Rif1Q6PR54 Sumf1-203ENSMUST00000167338 1044 ntAPPRIS ALT2 TSL 5 BASIC19.34■□□□□ 0.69
Rif1Q6PR54 Mapkapk5-201ENSMUST00000031410 2234 ntAPPRIS P2 TSL 1 (best) BASIC19.34■□□□□ 0.69
Rif1Q6PR54 E2f5-201ENSMUST00000029069 1779 ntAPPRIS P2 TSL 1 (best) BASIC19.33■□□□□ 0.69
Rif1Q6PR54 Cdv3-ps-201ENSMUST00000169632 827 ntBASIC19.33■□□□□ 0.69
Rif1Q6PR54 Gadd45a-207ENSMUST00000204369 716 ntTSL 5 BASIC19.33■□□□□ 0.69
Retrieved 100 of 76,532 protein–RNA pairs in 1195.7 ms