Protein–RNA interactions for Protein: Q5R1I4

Trav6-2, T cell receptor alpha variable 6-2 (Fragment), mousemouse

Predictions only

Length 113 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav6-2Q5R1I4 Preb-209ENSMUST00000202567 1869 ntTSL 1 (best) BASIC19.94■□□□□ 0.78
Trav6-2Q5R1I4 Isoc1-201ENSMUST00000025503 2563 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
Trav6-2Q5R1I4 Rbm45-201ENSMUST00000046389 1898 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
Trav6-2Q5R1I4 Snx21-203ENSMUST00000152471 1243 ntTSL 1 (best) BASIC19.93■□□□□ 0.78
Trav6-2Q5R1I4 AC166358.2-201ENSMUST00000223403 734 ntTSL 5 BASIC19.93■□□□□ 0.78
Trav6-2Q5R1I4 Srcap-211ENSMUST00000189136 1960 ntTSL 1 (best) BASIC19.93■□□□□ 0.78
Trav6-2Q5R1I4 Nucks1-203ENSMUST00000189946 2375 ntAPPRIS ALT2 TSL 1 (best) BASIC19.93■□□□□ 0.78
Trav6-2Q5R1I4 Dexi-201ENSMUST00000038281 1389 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
Trav6-2Q5R1I4 March5-202ENSMUST00000112391 1293 ntTSL 1 (best) BASIC19.92■□□□□ 0.78
Trav6-2Q5R1I4 Gm43592-201ENSMUST00000196922 1165 ntBASIC19.92■□□□□ 0.78
Trav6-2Q5R1I4 Gm7544-201ENSMUST00000222426 828 ntAPPRIS P1 BASIC19.92■□□□□ 0.78
Trav6-2Q5R1I4 Cadm1-209ENSMUST00000152459 1784 ntTSL 1 (best) BASIC19.92■□□□□ 0.78
Trav6-2Q5R1I4 Gm20208-202ENSMUST00000219905 1528 ntTSL 1 (best) BASIC19.92■□□□□ 0.78
Trav6-2Q5R1I4 Tm6sf1-201ENSMUST00000041890 2226 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
Trav6-2Q5R1I4 Gm15546-201ENSMUST00000122095 826 ntBASIC19.91■□□□□ 0.78
Trav6-2Q5R1I4 Foxe3-201ENSMUST00000050940 867 ntAPPRIS P1 BASIC19.91■□□□□ 0.78
Trav6-2Q5R1I4 Eif5a-208ENSMUST00000108611 1353 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
Trav6-2Q5R1I4 Neurog2-201ENSMUST00000029587 2227 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
Trav6-2Q5R1I4 Fgf16-201ENSMUST00000033581 1645 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
Trav6-2Q5R1I4 Msto1-202ENSMUST00000126245 1875 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
Trav6-2Q5R1I4 Gm12905-201ENSMUST00000153814 658 ntTSL 2 BASIC19.89■□□□□ 0.77
Trav6-2Q5R1I4 Mpnd-208ENSMUST00000159996 1444 ntAPPRIS ALT2 TSL 5 BASIC19.89■□□□□ 0.77
Trav6-2Q5R1I4 Gm6217-201ENSMUST00000222182 829 ntAPPRIS P1 BASIC19.89■□□□□ 0.77
Trav6-2Q5R1I4 2410017I17Rik-202ENSMUST00000090537 2053 ntTSL 2 BASIC19.89■□□□□ 0.77
Trav6-2Q5R1I4 Tmem106c-201ENSMUST00000064200 1635 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
Trav6-2Q5R1I4 Pdgfa-204ENSMUST00000110897 1287 ntAPPRIS P1 TSL 5 BASIC19.88■□□□□ 0.77
Trav6-2Q5R1I4 Gm2415-202ENSMUST00000134688 401 ntTSL 2 BASIC19.88■□□□□ 0.77
Trav6-2Q5R1I4 Asf1a-201ENSMUST00000020004 2201 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
Trav6-2Q5R1I4 Frat2-201ENSMUST00000059231 2161 ntAPPRIS P1 BASIC19.88■□□□□ 0.77
Trav6-2Q5R1I4 Gng12-204ENSMUST00000114225 1876 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
Trav6-2Q5R1I4 Scn1b-201ENSMUST00000098548 1573 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
Trav6-2Q5R1I4 Gm28417-202ENSMUST00000185881 538 ntTSL 3 BASIC19.87■□□□□ 0.77
Trav6-2Q5R1I4 Coprs-201ENSMUST00000033839 793 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
Trav6-2Q5R1I4 Dhrs11-201ENSMUST00000047560 1254 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
Trav6-2Q5R1I4 Fam149b-203ENSMUST00000090499 2370 ntAPPRIS P4 TSL 1 (best) BASIC19.87■□□□□ 0.77
Trav6-2Q5R1I4 Dynll1-202ENSMUST00000112090 729 ntAPPRIS P1 TSL 2 BASIC19.86■□□□□ 0.77
Trav6-2Q5R1I4 Clpp-201ENSMUST00000002735 1207 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
Trav6-2Q5R1I4 Hras-202ENSMUST00000097957 1199 ntAPPRIS P1 TSL 2 BASIC19.86■□□□□ 0.77
Trav6-2Q5R1I4 Sox17-202ENSMUST00000116652 1512 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
Trav6-2Q5R1I4 Amigo1-201ENSMUST00000050909 5030 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
Trav6-2Q5R1I4 Upf3a-201ENSMUST00000043767 2057 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
Trav6-2Q5R1I4 Exosc8-201ENSMUST00000029316 1300 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
Trav6-2Q5R1I4 Jdp2-201ENSMUST00000050687 1643 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
Trav6-2Q5R1I4 Tmx4-202ENSMUST00000110119 596 ntTSL 2 BASIC19.85■□□□□ 0.77
Trav6-2Q5R1I4 Nsd1-203ENSMUST00000224156 1149 ntBASIC19.85■□□□□ 0.77
Trav6-2Q5R1I4 Sos2-201ENSMUST00000035773 5607 ntAPPRIS P2 TSL 5 BASIC19.85■□□□□ 0.77
Trav6-2Q5R1I4 Ube2k-206ENSMUST00000201984 1449 ntTSL 3 BASIC19.84■□□□□ 0.77
Trav6-2Q5R1I4 Mnx1-201ENSMUST00000001608 2018 ntAPPRIS ALT2 TSL 5 BASIC19.83■□□□□ 0.77
Trav6-2Q5R1I4 Lgi2-201ENSMUST00000039750 6456 ntAPPRIS P3 TSL 1 (best) BASIC19.83■□□□□ 0.77
Trav6-2Q5R1I4 Sin3b-202ENSMUST00000109950 1024 ntTSL 1 (best) BASIC19.83■□□□□ 0.77
Trav6-2Q5R1I4 Vax1-201ENSMUST00000172821 1044 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.77
Trav6-2Q5R1I4 Gm5522-201ENSMUST00000189483 1242 ntBASIC19.83■□□□□ 0.77
Trav6-2Q5R1I4 Ndfip1-201ENSMUST00000025293 930 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.77
Trav6-2Q5R1I4 Spryd7-202ENSMUST00000100496 1459 ntTSL 1 (best) BASIC19.83■□□□□ 0.76
Trav6-2Q5R1I4 Jmjd6-201ENSMUST00000047616 1668 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.76
Trav6-2Q5R1I4 Dusp2-201ENSMUST00000028846 1617 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.76
Trav6-2Q5R1I4 Tmem235-201ENSMUST00000093905 1820 ntAPPRIS P1 TSL 5 BASIC19.83■□□□□ 0.76
Trav6-2Q5R1I4 Efna2-201ENSMUST00000003154 2131 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
Trav6-2Q5R1I4 Npas1-201ENSMUST00000002053 2091 ntAPPRIS P1 TSL 5 BASIC19.82■□□□□ 0.76
Trav6-2Q5R1I4 Suds3-201ENSMUST00000086471 2425 ntAPPRIS P3 TSL 1 (best) BASIC19.82■□□□□ 0.76
Trav6-2Q5R1I4 Gsc2-201ENSMUST00000012279 1172 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
Trav6-2Q5R1I4 Fam98c-209ENSMUST00000164589 1293 ntAPPRIS P1 TSL 5 BASIC19.82■□□□□ 0.76
Trav6-2Q5R1I4 Fam168b-204ENSMUST00000170092 941 ntTSL 5 BASIC19.82■□□□□ 0.76
Trav6-2Q5R1I4 Ak2-201ENSMUST00000030583 986 ntAPPRIS P4 TSL 1 (best) BASIC19.82■□□□□ 0.76
Trav6-2Q5R1I4 Mpv17l2-201ENSMUST00000038626 980 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
Trav6-2Q5R1I4 Vmac-201ENSMUST00000067931 2174 ntAPPRIS P3 TSL 1 (best) BASIC19.82■□□□□ 0.76
Trav6-2Q5R1I4 Slc16a11-207ENSMUST00000136328 1403 ntTSL 5 BASIC19.82■□□□□ 0.76
Trav6-2Q5R1I4 Csnk1g2-201ENSMUST00000079773 2348 ntTSL 1 (best) BASIC19.81■□□□□ 0.76
Trav6-2Q5R1I4 St7-205ENSMUST00000081635 2115 ntTSL 1 (best) BASIC19.81■□□□□ 0.76
Trav6-2Q5R1I4 AC102554.1-201ENSMUST00000216236 537 ntTSL 5 BASIC19.81■□□□□ 0.76
Trav6-2Q5R1I4 Srd5a3-201ENSMUST00000031143 1747 ntAPPRIS P2 TSL 1 (best) BASIC19.81■□□□□ 0.76
Trav6-2Q5R1I4 Adra1d-201ENSMUST00000103184 1899 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
Trav6-2Q5R1I4 5031425E22Rik-201ENSMUST00000101522 2110 ntBASIC19.81■□□□□ 0.76
Trav6-2Q5R1I4 Reep6-202ENSMUST00000105354 2208 ntAPPRIS P3 TSL 1 (best) BASIC19.8■□□□□ 0.76
Trav6-2Q5R1I4 Reep6-205ENSMUST00000105358 2208 ntTSL 1 (best) BASIC19.8■□□□□ 0.76
Trav6-2Q5R1I4 Cckbr-202ENSMUST00000181339 1326 ntTSL 1 (best) BASIC19.79■□□□□ 0.76
Trav6-2Q5R1I4 Gng12-203ENSMUST00000114224 680 ntAPPRIS P1 TSL 3 BASIC19.79■□□□□ 0.76
Trav6-2Q5R1I4 Gng12-206ENSMUST00000114227 1125 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
Trav6-2Q5R1I4 Susd3-203ENSMUST00000119721 1249 ntAPPRIS ALT2 TSL 1 (best) BASIC19.79■□□□□ 0.76
Trav6-2Q5R1I4 Gm43566-201ENSMUST00000196851 808 ntBASIC19.79■□□□□ 0.76
Trav6-2Q5R1I4 Gm45095-201ENSMUST00000206736 254 ntTSL 5 BASIC19.79■□□□□ 0.76
Trav6-2Q5R1I4 Trappc6b-207ENSMUST00000218686 785 ntTSL 3 BASIC19.79■□□□□ 0.76
Trav6-2Q5R1I4 Cys1-207ENSMUST00000186602 1757 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
Trav6-2Q5R1I4 Ffar4-201ENSMUST00000067098 1393 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
Trav6-2Q5R1I4 2310061I04Rik-202ENSMUST00000146451 2081 ntTSL 1 (best) BASIC19.79■□□□□ 0.76
Trav6-2Q5R1I4 Cldnd1-204ENSMUST00000162057 1540 ntAPPRIS P1 TSL 5 BASIC19.78■□□□□ 0.76
Trav6-2Q5R1I4 Gm45444-201ENSMUST00000211394 898 ntBASIC19.78■□□□□ 0.76
Trav6-2Q5R1I4 A430027H14Rik-201ENSMUST00000191809 1467 ntBASIC19.78■□□□□ 0.76
Trav6-2Q5R1I4 Rgs7-206ENSMUST00000194555 2431 ntAPPRIS ALT2 TSL 1 (best) BASIC19.77■□□□□ 0.76
Trav6-2Q5R1I4 Crim1-201ENSMUST00000112498 5995 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.76
Trav6-2Q5R1I4 Kif1c-205ENSMUST00000152618 1943 ntTSL 1 (best) BASIC19.77■□□□□ 0.76
Trav6-2Q5R1I4 Ppia-202ENSMUST00000132846 1170 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.76
Trav6-2Q5R1I4 Gm22567-201ENSMUST00000175542 342 ntBASIC19.77■□□□□ 0.76
Trav6-2Q5R1I4 Cmas-201ENSMUST00000032419 1760 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.76
Trav6-2Q5R1I4 Tmem55b-206ENSMUST00000161166 1445 ntTSL 1 (best) BASIC19.76■□□□□ 0.75
Trav6-2Q5R1I4 Rmnd5a-201ENSMUST00000002292 6165 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
Trav6-2Q5R1I4 Siah1a-201ENSMUST00000045296 1968 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
Trav6-2Q5R1I4 Paqr3-202ENSMUST00000112968 1875 ntTSL 1 (best) BASIC19.76■□□□□ 0.75
Trav6-2Q5R1I4 Fn1-208ENSMUST00000186940 1350 ntTSL 1 (best) BASIC19.76■□□□□ 0.75
Trav6-2Q5R1I4 Phf2os1-201ENSMUST00000123212 498 ntTSL 3 BASIC19.76■□□□□ 0.75
Retrieved 100 of 76,532 protein–RNA pairs in 154.3 ms