Protein–RNA interactions for Protein: Q5R1C3

Trav3-3, T cell receptor alpha variable 3-3 (Fragment), mousemouse

Predictions only

Length 114 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav3-3Q5R1C3 Snf8-202ENSMUST00000107700 849 ntTSL 2 BASIC16.84■□□□□ 0.29
Trav3-3Q5R1C3 A530058N18Rik-201ENSMUST00000128469 646 ntTSL 2 BASIC16.84■□□□□ 0.29
Trav3-3Q5R1C3 Tmed7-203ENSMUST00000151189 1348 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
Trav3-3Q5R1C3 Dhrs13-201ENSMUST00000021187 1779 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
Trav3-3Q5R1C3 Magi2-205ENSMUST00000197354 4785 ntAPPRIS ALT2 TSL 5 BASIC16.84■□□□□ 0.29
Trav3-3Q5R1C3 Mpzl1-202ENSMUST00000111435 2285 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
Trav3-3Q5R1C3 Ppp1r12c-201ENSMUST00000013886 2983 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
Trav3-3Q5R1C3 Tcerg1l-201ENSMUST00000160436 2565 ntAPPRIS P1 TSL 5 BASIC16.83■□□□□ 0.28
Trav3-3Q5R1C3 Tmem164-206ENSMUST00000112896 5224 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
Trav3-3Q5R1C3 Srp9-202ENSMUST00000111018 823 ntTSL 1 (best) BASIC16.82■□□□□ 0.28
Trav3-3Q5R1C3 Carm1-203ENSMUST00000115395 3152 ntAPPRIS ALT2 TSL 1 (best) BASIC16.82■□□□□ 0.28
Trav3-3Q5R1C3 Cers1-203ENSMUST00000165819 2728 ntAPPRIS P4 TSL 1 (best) BASIC16.82■□□□□ 0.28
Trav3-3Q5R1C3 Pcmtd1-201ENSMUST00000061280 5232 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
Trav3-3Q5R1C3 Nrsn1-201ENSMUST00000057866 2222 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
Trav3-3Q5R1C3 Tcte2-204ENSMUST00000130033 1462 ntAPPRIS ALT2 TSL 1 (best) BASIC16.81■□□□□ 0.28
Trav3-3Q5R1C3 Srsf12-201ENSMUST00000067864 2939 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
Trav3-3Q5R1C3 Vstm2l-201ENSMUST00000109523 1363 ntAPPRIS P1 TSL 5 BASIC16.81■□□□□ 0.28
Trav3-3Q5R1C3 Slc15a4-201ENSMUST00000031367 2732 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
Trav3-3Q5R1C3 Mppe1-201ENSMUST00000073054 2007 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
Trav3-3Q5R1C3 Tspan33-202ENSMUST00000115250 1977 ntAPPRIS ALT1 TSL 1 (best) BASIC16.81■□□□□ 0.28
Trav3-3Q5R1C3 Gm24804-201ENSMUST00000174982 85 ntBASIC16.81■□□□□ 0.28
Trav3-3Q5R1C3 Adcy9-203ENSMUST00000120080 4974 ntAPPRIS ALT2 TSL 1 (best) BASIC16.81■□□□□ 0.28
Trav3-3Q5R1C3 Dbp-201ENSMUST00000080885 1837 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
Trav3-3Q5R1C3 Smad4-201ENSMUST00000025393 3384 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
Trav3-3Q5R1C3 Ccdc85c-202ENSMUST00000222310 4298 ntAPPRIS P2 TSL 5 BASIC16.8■□□□□ 0.28
Trav3-3Q5R1C3 Smad2-202ENSMUST00000091831 1645 ntAPPRIS ALT1 TSL 5 BASIC16.8■□□□□ 0.28
Trav3-3Q5R1C3 Spsb3-205ENSMUST00000120943 1949 ntAPPRIS ALT2 TSL 1 (best) BASIC16.8■□□□□ 0.28
Trav3-3Q5R1C3 Ablim1-208ENSMUST00000111544 2231 ntTSL 5 BASIC16.8■□□□□ 0.28
Trav3-3Q5R1C3 Vdac1-202ENSMUST00000102758 2022 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
Trav3-3Q5R1C3 Pitpna-205ENSMUST00000179445 1665 ntAPPRIS ALT1 TSL 5 BASIC16.79■□□□□ 0.28
Trav3-3Q5R1C3 6530409C15Rik-202ENSMUST00000143551 1573 ntTSL 1 (best) BASIC16.79■□□□□ 0.28
Trav3-3Q5R1C3 Prr5-201ENSMUST00000065499 1830 ntAPPRIS P3 TSL 1 (best) BASIC16.79■□□□□ 0.28
Trav3-3Q5R1C3 AC123857.1-201ENSMUST00000181053 2312 ntTSL 1 (best) BASIC16.79■□□□□ 0.28
Trav3-3Q5R1C3 Ube2g2-204ENSMUST00000174510 2031 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
Trav3-3Q5R1C3 Coq10a-207ENSMUST00000220227 1434 ntAPPRIS ALT2 TSL 5 BASIC16.79■□□□□ 0.28
Trav3-3Q5R1C3 Serpinh1-202ENSMUST00000169437 2274 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
Trav3-3Q5R1C3 Pptc7-201ENSMUST00000053426 4644 ntAPPRIS P2 TSL 1 (best) BASIC16.78■□□□□ 0.28
Trav3-3Q5R1C3 Cds2-203ENSMUST00000110158 1247 ntTSL 1 (best) BASIC16.78■□□□□ 0.28
Trav3-3Q5R1C3 Fam20b-202ENSMUST00000122424 4532 ntAPPRIS P1 TSL 5 BASIC16.78■□□□□ 0.28
Trav3-3Q5R1C3 Pou3f3-201ENSMUST00000054883 7409 ntAPPRIS P1 BASIC16.78■□□□□ 0.28
Trav3-3Q5R1C3 Rab43-203ENSMUST00000078647 4605 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
Trav3-3Q5R1C3 Gm6934-201ENSMUST00000194780 1905 ntBASIC16.77■□□□□ 0.28
Trav3-3Q5R1C3 Gse1-202ENSMUST00000118136 4492 ntAPPRIS ALT2 TSL 1 (best) BASIC16.77■□□□□ 0.28
Trav3-3Q5R1C3 Gm16148-201ENSMUST00000119653 893 ntBASIC16.77■□□□□ 0.28
Trav3-3Q5R1C3 Znrf3-202ENSMUST00000143746 1022 ntTSL 1 (best) BASIC16.77■□□□□ 0.28
Trav3-3Q5R1C3 Myo1b-202ENSMUST00000046390 5052 ntTSL 1 (best) BASIC16.77■□□□□ 0.28
Trav3-3Q5R1C3 Psme4-201ENSMUST00000041231 6491 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.27
Trav3-3Q5R1C3 Mettl25-201ENSMUST00000046638 2033 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.27
Trav3-3Q5R1C3 Frmd5-201ENSMUST00000110592 2222 ntAPPRIS P1 TSL 5 BASIC16.77■□□□□ 0.27
Trav3-3Q5R1C3 Odc1-201ENSMUST00000171737 2208 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.27
Trav3-3Q5R1C3 Rheb-201ENSMUST00000030787 1784 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.27
Trav3-3Q5R1C3 Mapk13-201ENSMUST00000004986 1392 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.27
Trav3-3Q5R1C3 Fam60a-202ENSMUST00000081956 2737 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
Trav3-3Q5R1C3 AC164550.2-201ENSMUST00000219127 2086 ntTSL 5 BASIC16.76■□□□□ 0.27
Trav3-3Q5R1C3 Brsk1-201ENSMUST00000048248 2996 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
Trav3-3Q5R1C3 Snx3-201ENSMUST00000019939 1401 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
Trav3-3Q5R1C3 Hlx-201ENSMUST00000048572 2278 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
Trav3-3Q5R1C3 Sowahd-201ENSMUST00000060057 1574 ntAPPRIS P1 BASIC16.75■□□□□ 0.27
Trav3-3Q5R1C3 Qk-201ENSMUST00000042296 6718 ntTSL 1 (best) BASIC16.75■□□□□ 0.27
Trav3-3Q5R1C3 Pou2f2-204ENSMUST00000108416 1754 ntTSL 1 (best) BASIC16.74■□□□□ 0.27
Trav3-3Q5R1C3 Mapkap1-202ENSMUST00000113124 1758 ntAPPRIS ALT1 TSL 5 BASIC16.74■□□□□ 0.27
Trav3-3Q5R1C3 Ypel1-201ENSMUST00000035682 3322 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
Trav3-3Q5R1C3 Mapk1-203ENSMUST00000115731 1747 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
Trav3-3Q5R1C3 Stx3-202ENSMUST00000069285 2810 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
Trav3-3Q5R1C3 Magi3-202ENSMUST00000121198 5912 ntAPPRIS ALT2 TSL 5 BASIC16.74■□□□□ 0.27
Trav3-3Q5R1C3 Cnot6-201ENSMUST00000020624 2498 ntTSL 1 (best) BASIC16.74■□□□□ 0.27
Trav3-3Q5R1C3 4933440N22Rik-202ENSMUST00000204444 1952 ntBASIC16.73■□□□□ 0.27
Trav3-3Q5R1C3 Macrod2-207ENSMUST00000110067 4730 ntAPPRIS ALT2 TSL 5 BASIC16.73■□□□□ 0.27
Trav3-3Q5R1C3 Trim47-201ENSMUST00000021120 2204 ntAPPRIS P4 TSL 1 (best) BASIC16.73■□□□□ 0.27
Trav3-3Q5R1C3 B3gat1-201ENSMUST00000115269 1665 ntTSL 1 (best) BASIC16.73■□□□□ 0.27
Trav3-3Q5R1C3 Rbms1-202ENSMUST00000112509 1806 ntTSL 1 (best) BASIC16.73■□□□□ 0.27
Trav3-3Q5R1C3 Nckap1-201ENSMUST00000028386 4469 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
Trav3-3Q5R1C3 Magi3-201ENSMUST00000064371 6640 ntAPPRIS P3 TSL 1 (best) BASIC16.72■□□□□ 0.27
Trav3-3Q5R1C3 Hgh1-201ENSMUST00000023213 1959 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
Trav3-3Q5R1C3 Kcnq5-205ENSMUST00000173058 2472 ntTSL 5 BASIC16.71■□□□□ 0.27
Trav3-3Q5R1C3 Dnttip1-202ENSMUST00000109326 476 ntTSL 1 (best) BASIC16.71■□□□□ 0.27
Trav3-3Q5R1C3 Dbf4-207ENSMUST00000171808 2402 ntAPPRIS P3 TSL 1 (best) BASIC16.71■□□□□ 0.27
Trav3-3Q5R1C3 Zdhhc2-205ENSMUST00000167766 1759 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
Trav3-3Q5R1C3 Gm26617-201ENSMUST00000180381 4429 ntTSL 3 BASIC16.71■□□□□ 0.26
Trav3-3Q5R1C3 Tbcel-204ENSMUST00000128959 1535 ntAPPRIS P1 TSL 5 BASIC16.7■□□□□ 0.26
Trav3-3Q5R1C3 Arhgap9-203ENSMUST00000219026 1946 ntAPPRIS P2 TSL 1 (best) BASIC16.7■□□□□ 0.26
Trav3-3Q5R1C3 Hsf1-207ENSMUST00000228371 2102 ntBASIC16.7■□□□□ 0.26
Trav3-3Q5R1C3 Fbxw8-201ENSMUST00000049474 5000 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
Trav3-3Q5R1C3 Mthfd2l-201ENSMUST00000071652 2159 ntAPPRIS P1 TSL 5 BASIC16.7■□□□□ 0.26
Trav3-3Q5R1C3 Bean1-202ENSMUST00000164076 2423 ntAPPRIS ALT2 TSL 1 (best) BASIC16.7■□□□□ 0.26
Trav3-3Q5R1C3 Csrp1-201ENSMUST00000027677 1823 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
Trav3-3Q5R1C3 Csrp1-202ENSMUST00000097561 1828 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
Trav3-3Q5R1C3 Fzd8-201ENSMUST00000041080 3346 ntAPPRIS P1 BASIC16.7■□□□□ 0.26
Trav3-3Q5R1C3 Rnd2-201ENSMUST00000001347 1394 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
Trav3-3Q5R1C3 Pradc1-202ENSMUST00000113770 610 ntTSL 1 (best) BASIC16.69■□□□□ 0.26
Trav3-3Q5R1C3 Gm15043-201ENSMUST00000118843 1543 ntBASIC16.69■□□□□ 0.26
Trav3-3Q5R1C3 Egr3-201ENSMUST00000035908 1509 ntAPPRIS ALT1 TSL 1 (best) BASIC16.69■□□□□ 0.26
Trav3-3Q5R1C3 Zfp513-201ENSMUST00000031562 2213 ntTSL 1 (best) BASIC16.69■□□□□ 0.26
Trav3-3Q5R1C3 Nab2-201ENSMUST00000026469 2582 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
Trav3-3Q5R1C3 Ctdsp1-201ENSMUST00000027367 2876 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
Trav3-3Q5R1C3 Zdhhc14-201ENSMUST00000089185 3115 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
Trav3-3Q5R1C3 Kmt5a-202ENSMUST00000100709 1425 ntTSL 1 (best) BASIC16.68■□□□□ 0.26
Trav3-3Q5R1C3 Ppp2r5a-201ENSMUST00000067976 3088 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
Trav3-3Q5R1C3 Tle1-205ENSMUST00000107337 2067 ntTSL 1 (best) BASIC16.68■□□□□ 0.26
Trav3-3Q5R1C3 Cdk13-201ENSMUST00000042365 5202 ntAPPRIS P2 TSL 1 (best) BASIC16.66■□□□□ 0.26
Retrieved 100 of 76,532 protein–RNA pairs in 26.8 ms