Protein–RNA interactions for Protein: Q3UMQ8

Naf1, H/ACA ribonucleoprotein complex non-core subunit NAF1, mousemouse

Predictions only

Length 489 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Naf1Q3UMQ8 Vegfa-212ENSMUST00000214739 1107 ntAPPRIS ALT2 TSL 1 (best) BASIC22.98■■□□□ 1.27
Naf1Q3UMQ8 Vegfa-213ENSMUST00000217017 1179 ntAPPRIS P4 TSL 1 (best) BASIC22.98■■□□□ 1.27
Naf1Q3UMQ8 Hist2h3c1-201ENSMUST00000176059 1820 ntAPPRIS P1 BASIC22.98■■□□□ 1.27
Naf1Q3UMQ8 Hist2h3c1-202ENSMUST00000177796 1825 ntBASIC22.98■■□□□ 1.27
Naf1Q3UMQ8 Kif1c-205ENSMUST00000152618 1943 ntTSL 1 (best) BASIC22.98■■□□□ 1.27
Naf1Q3UMQ8 Slc39a13-203ENSMUST00000111436 1291 ntTSL 1 (best) BASIC22.97■■□□□ 1.27
Naf1Q3UMQ8 Ildr2-202ENSMUST00000192426 1238 ntTSL 1 (best) BASIC22.97■■□□□ 1.27
Naf1Q3UMQ8 Asf1a-201ENSMUST00000020004 2201 ntAPPRIS P1 TSL 1 (best) BASIC22.97■■□□□ 1.27
Naf1Q3UMQ8 Maz-204ENSMUST00000206254 2282 ntTSL 5 BASIC22.97■■□□□ 1.27
Naf1Q3UMQ8 Gm44428-201ENSMUST00000204474 874 ntBASIC22.96■■□□□ 1.27
Naf1Q3UMQ8 Ddrgk1-201ENSMUST00000089559 1238 ntAPPRIS P1 TSL 1 (best) BASIC22.96■■□□□ 1.27
Naf1Q3UMQ8 Gm20458-201ENSMUST00000164863 1369 ntAPPRIS P1 TSL 5 BASIC22.96■■□□□ 1.27
Naf1Q3UMQ8 Nudt3-203ENSMUST00000114886 996 ntTSL 2 BASIC22.95■■□□□ 1.26
Naf1Q3UMQ8 Usf1-210ENSMUST00000167546 1822 ntAPPRIS P1 TSL 5 BASIC22.95■■□□□ 1.26
Naf1Q3UMQ8 Csrp1-201ENSMUST00000027677 1823 ntAPPRIS P1 TSL 1 (best) BASIC22.95■■□□□ 1.26
Naf1Q3UMQ8 Csrp1-202ENSMUST00000097561 1828 ntAPPRIS P1 TSL 1 (best) BASIC22.95■■□□□ 1.26
Naf1Q3UMQ8 A830092H15Rik-201ENSMUST00000099182 1229 ntBASIC22.95■■□□□ 1.26
Naf1Q3UMQ8 Cyp2r1-202ENSMUST00000119712 917 ntTSL 5 BASIC22.94■■□□□ 1.26
Naf1Q3UMQ8 Sft2d1-210ENSMUST00000154553 1049 ntAPPRIS P1 TSL 1 (best) BASIC22.94■■□□□ 1.26
Naf1Q3UMQ8 Clk2-202ENSMUST00000121212 2154 ntAPPRIS P3 TSL 1 (best) BASIC22.94■■□□□ 1.26
Naf1Q3UMQ8 Jag2-201ENSMUST00000075827 5106 ntAPPRIS P1 TSL 1 (best) BASIC22.94■■□□□ 1.26
Naf1Q3UMQ8 Krtap28-10-201ENSMUST00000188323 957 ntAPPRIS P1 BASIC22.93■■□□□ 1.26
Naf1Q3UMQ8 Fam149b-201ENSMUST00000037698 924 ntTSL 1 (best) BASIC22.93■■□□□ 1.26
Naf1Q3UMQ8 Tnfsfm13-203ENSMUST00000180587 2235 ntAPPRIS P3 TSL 2 BASIC22.92■■□□□ 1.26
Naf1Q3UMQ8 Arhgdia-201ENSMUST00000067936 2150 ntAPPRIS P1 TSL 1 (best) BASIC22.92■■□□□ 1.26
Naf1Q3UMQ8 Aldoa-214ENSMUST00000207534 741 ntAPPRIS P1 TSL 5 BASIC22.92■■□□□ 1.26
Naf1Q3UMQ8 Nrsn1-201ENSMUST00000057866 2222 ntAPPRIS P1 TSL 1 (best) BASIC22.92■■□□□ 1.26
Naf1Q3UMQ8 Rasgef1c-203ENSMUST00000093142 2216 ntAPPRIS P3 TSL 1 (best) BASIC22.92■■□□□ 1.26
Naf1Q3UMQ8 Mapkap1-202ENSMUST00000113124 1758 ntAPPRIS ALT1 TSL 5 BASIC22.91■■□□□ 1.26
Naf1Q3UMQ8 Kcnj6-201ENSMUST00000095873 1773 ntTSL 1 (best) BASIC22.91■■□□□ 1.26
Naf1Q3UMQ8 Cln6-201ENSMUST00000034776 2142 ntAPPRIS P1 TSL 1 (best) BASIC22.91■■□□□ 1.26
Naf1Q3UMQ8 Gm10420-201ENSMUST00000121713 882 ntBASIC22.91■■□□□ 1.26
Naf1Q3UMQ8 Bloc1s2-201ENSMUST00000079033 878 ntAPPRIS P1 TSL 1 (best) BASIC22.91■■□□□ 1.26
Naf1Q3UMQ8 Scn1b-201ENSMUST00000098548 1573 ntAPPRIS P1 TSL 1 (best) BASIC22.91■■□□□ 1.26
Naf1Q3UMQ8 Mpp6-209ENSMUST00000204545 2418 ntAPPRIS P1 TSL 5 BASIC22.91■■□□□ 1.26
Naf1Q3UMQ8 D17Wsu92e-201ENSMUST00000075076 1470 ntTSL 1 (best) BASIC22.9■■□□□ 1.26
Naf1Q3UMQ8 Cited2-203ENSMUST00000219558 2411 ntAPPRIS P1 BASIC22.9■■□□□ 1.26
Naf1Q3UMQ8 Efna3-201ENSMUST00000029673 2363 ntAPPRIS P2 TSL 1 (best) BASIC22.9■■□□□ 1.26
Naf1Q3UMQ8 St7-205ENSMUST00000081635 2115 ntTSL 1 (best) BASIC22.9■■□□□ 1.26
Naf1Q3UMQ8 Hpf1-204ENSMUST00000146863 531 ntTSL 2 BASIC22.89■■□□□ 1.25
Naf1Q3UMQ8 Gm5067-201ENSMUST00000170449 1009 ntBASIC22.89■■□□□ 1.25
Naf1Q3UMQ8 Irf2bp2-201ENSMUST00000054960 5080 ntAPPRIS P1 TSL 2 BASIC22.89■■□□□ 1.25
Naf1Q3UMQ8 Ipmk-203ENSMUST00000121446 1492 ntAPPRIS ALT2 TSL 5 BASIC22.89■■□□□ 1.25
Naf1Q3UMQ8 Prph-202ENSMUST00000047104 1865 ntAPPRIS P3 TSL 1 (best) BASIC22.89■■□□□ 1.25
Naf1Q3UMQ8 Gm38287-201ENSMUST00000195193 2051 ntTSL 3 BASIC22.89■■□□□ 1.25
Naf1Q3UMQ8 Olfm2-203ENSMUST00000215999 1895 ntAPPRIS ALT2 TSL 3 BASIC22.88■■□□□ 1.25
Naf1Q3UMQ8 Btf3l4-203ENSMUST00000102741 1033 ntAPPRIS P1 TSL 1 (best) BASIC22.88■■□□□ 1.25
Naf1Q3UMQ8 Lsm4-205ENSMUST00000210987 636 ntTSL 5 BASIC22.88■■□□□ 1.25
Naf1Q3UMQ8 Gm960-204ENSMUST00000225896 2202 ntAPPRIS ALT2 BASIC22.88■■□□□ 1.25
Naf1Q3UMQ8 Gm10499-202ENSMUST00000174778 1698 ntTSL 1 (best) BASIC22.87■■□□□ 1.25
Naf1Q3UMQ8 Shox2-204ENSMUST00000162439 1081 ntTSL 1 (best) BASIC22.87■■□□□ 1.25
Naf1Q3UMQ8 Galr3-201ENSMUST00000058004 1245 ntAPPRIS P1 TSL 1 (best) BASIC22.87■■□□□ 1.25
Naf1Q3UMQ8 Htatsf1-202ENSMUST00000114751 1128 ntTSL 1 (best) BASIC22.86■■□□□ 1.25
Naf1Q3UMQ8 Pgls-201ENSMUST00000034264 893 ntAPPRIS P1 TSL 1 (best) BASIC22.86■■□□□ 1.25
Naf1Q3UMQ8 Siah1a-201ENSMUST00000045296 1968 ntAPPRIS P1 TSL 1 (best) BASIC22.86■■□□□ 1.25
Naf1Q3UMQ8 Fam220a-201ENSMUST00000067145 2198 ntAPPRIS P1 TSL 1 (best) BASIC22.86■■□□□ 1.25
Naf1Q3UMQ8 Foxc1-201ENSMUST00000062292 5844 ntAPPRIS P1 BASIC22.85■■□□□ 1.25
Naf1Q3UMQ8 Hnrnpul1-202ENSMUST00000108401 1240 ntTSL 1 (best) BASIC22.85■■□□□ 1.25
Naf1Q3UMQ8 Sike1-202ENSMUST00000119450 774 ntTSL 3 BASIC22.85■■□□□ 1.25
Naf1Q3UMQ8 Emc8-208ENSMUST00000181950 747 ntTSL 2 BASIC22.85■■□□□ 1.25
Naf1Q3UMQ8 Sh3rf1-201ENSMUST00000034060 5479 ntAPPRIS P1 TSL 1 (best) BASIC22.85■■□□□ 1.25
Naf1Q3UMQ8 Slc44a1-203ENSMUST00000107646 1974 ntTSL 5 BASIC22.85■■□□□ 1.25
Naf1Q3UMQ8 Sdccag3-202ENSMUST00000077983 1955 ntAPPRIS ALT2 TSL 1 (best) BASIC22.85■■□□□ 1.25
Naf1Q3UMQ8 Fam220a-205ENSMUST00000169329 2331 ntAPPRIS P1 TSL 1 (best) BASIC22.85■■□□□ 1.25
Naf1Q3UMQ8 Tmem106c-201ENSMUST00000064200 1635 ntAPPRIS P1 TSL 1 (best) BASIC22.84■■□□□ 1.25
Naf1Q3UMQ8 Tmem11-201ENSMUST00000062677 1457 ntAPPRIS P1 TSL 1 (best) BASIC22.84■■□□□ 1.25
Naf1Q3UMQ8 Ei24-201ENSMUST00000115086 2220 ntAPPRIS P1 TSL 1 (best) BASIC22.84■■□□□ 1.25
Naf1Q3UMQ8 Ppp1r35-201ENSMUST00000031739 956 ntAPPRIS P1 TSL 1 (best) BASIC22.83■■□□□ 1.25
Naf1Q3UMQ8 Lrrc4b-201ENSMUST00000058667 2728 ntAPPRIS P1 TSL 1 (best) BASIC22.83■■□□□ 1.24
Naf1Q3UMQ8 Mxra7-201ENSMUST00000021170 2063 ntAPPRIS P3 TSL 1 (best) BASIC22.83■■□□□ 1.24
Naf1Q3UMQ8 AC153890.1-201ENSMUST00000220021 2469 ntBASIC22.83■■□□□ 1.24
Naf1Q3UMQ8 Peg12-201ENSMUST00000094339 2640 ntAPPRIS P1 BASIC22.82■■□□□ 1.24
Naf1Q3UMQ8 Dnajc21-201ENSMUST00000136591 2060 ntAPPRIS P1 TSL 5 BASIC22.81■■□□□ 1.24
Naf1Q3UMQ8 E2f1-201ENSMUST00000000894 2755 ntAPPRIS ALT2 TSL 1 (best) BASIC22.81■■□□□ 1.24
Naf1Q3UMQ8 Slc25a33-201ENSMUST00000105686 1887 ntAPPRIS P1 TSL 1 (best) BASIC22.81■■□□□ 1.24
Naf1Q3UMQ8 Fam120a-201ENSMUST00000060805 5105 ntAPPRIS P1 TSL 1 (best) BASIC22.8■■□□□ 1.24
Naf1Q3UMQ8 Ica1-201ENSMUST00000038403 2075 ntAPPRIS P2 TSL 1 (best) BASIC22.8■■□□□ 1.24
Naf1Q3UMQ8 Gpr12-201ENSMUST00000036211 2219 ntAPPRIS P1 TSL 1 (best) BASIC22.8■■□□□ 1.24
Naf1Q3UMQ8 Usp2-206ENSMUST00000176416 1486 ntAPPRIS ALT2 TSL 1 (best) BASIC22.79■■□□□ 1.24
Naf1Q3UMQ8 Ttc9-201ENSMUST00000036116 2042 ntAPPRIS P1 TSL 1 (best) BASIC22.79■■□□□ 1.24
Naf1Q3UMQ8 B230377A18Rik-202ENSMUST00000192921 1364 ntBASIC22.79■■□□□ 1.24
Naf1Q3UMQ8 Dapk2-201ENSMUST00000034944 1772 ntAPPRIS P1 TSL 1 (best) BASIC22.79■■□□□ 1.24
Naf1Q3UMQ8 Nudt6-204ENSMUST00000108118 935 ntTSL 5 BASIC22.79■■□□□ 1.24
Naf1Q3UMQ8 Nudt6-201ENSMUST00000052645 1155 ntAPPRIS ALT2 TSL 1 (best) BASIC22.79■■□□□ 1.24
Naf1Q3UMQ8 Nudt6-202ENSMUST00000099130 1070 ntAPPRIS P3 TSL 1 (best) BASIC22.79■■□□□ 1.24
Naf1Q3UMQ8 Nans-201ENSMUST00000030018 2179 ntAPPRIS P1 TSL 1 (best) BASIC22.79■■□□□ 1.24
Naf1Q3UMQ8 Ei24-202ENSMUST00000163192 2309 ntAPPRIS P1 TSL 1 (best) BASIC22.79■■□□□ 1.24
Naf1Q3UMQ8 Kcnq5-206ENSMUST00000173404 2775 ntAPPRIS ALT2 TSL 5 BASIC22.78■■□□□ 1.24
Naf1Q3UMQ8 Tspan33-202ENSMUST00000115250 1977 ntAPPRIS ALT1 TSL 1 (best) BASIC22.78■■□□□ 1.24
Naf1Q3UMQ8 Tmem260-208ENSMUST00000226400 2281 ntAPPRIS ALT2 BASIC22.78■■□□□ 1.24
Naf1Q3UMQ8 Tmem9b-201ENSMUST00000033333 1703 ntAPPRIS P2 TSL 1 (best) BASIC22.78■■□□□ 1.24
Naf1Q3UMQ8 H1fx-201ENSMUST00000056403 1217 ntAPPRIS P1 BASIC22.78■■□□□ 1.24
Naf1Q3UMQ8 Snta1-201ENSMUST00000028991 2125 ntAPPRIS ALT2 TSL 1 (best) BASIC22.78■■□□□ 1.24
Naf1Q3UMQ8 Gnaq-201ENSMUST00000025541 5644 ntAPPRIS P1 TSL 1 (best) BASIC22.77■■□□□ 1.24
Naf1Q3UMQ8 Fzd9-201ENSMUST00000062572 2293 ntAPPRIS P1 BASIC22.77■■□□□ 1.24
Naf1Q3UMQ8 Zdhhc2-205ENSMUST00000167766 1759 ntAPPRIS P1 TSL 1 (best) BASIC22.77■■□□□ 1.24
Naf1Q3UMQ8 Lin7b-201ENSMUST00000003971 735 ntAPPRIS P1 TSL 1 (best) BASIC22.77■■□□□ 1.24
Naf1Q3UMQ8 Foxe3-201ENSMUST00000050940 867 ntAPPRIS P1 BASIC22.77■■□□□ 1.24
Naf1Q3UMQ8 Fam92a-208ENSMUST00000177837 1325 ntAPPRIS ALT2 TSL 5 BASIC22.77■■□□□ 1.24
Naf1Q3UMQ8 Tsen34-204ENSMUST00000108630 1779 ntTSL 1 (best) BASIC22.76■■□□□ 1.23
Retrieved 100 of 76,532 protein–RNA pairs in 132.7 ms