Protein–RNA interactions for Protein: P82348

Sgcg, Gamma-sarcoglycan, mousemouse

Predictions only

Length 291 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SgcgP82348 Asf1a-201ENSMUST00000020004 2201 ntAPPRIS P1 TSL 1 (best) BASIC22.28■■□□□ 1.16
SgcgP82348 Kif1c-205ENSMUST00000152618 1943 ntTSL 1 (best) BASIC22.27■■□□□ 1.16
SgcgP82348 Usf1-210ENSMUST00000167546 1822 ntAPPRIS P1 TSL 5 BASIC22.27■■□□□ 1.16
SgcgP82348 Gm44428-201ENSMUST00000204474 874 ntBASIC22.27■■□□□ 1.16
SgcgP82348 Fam149b-201ENSMUST00000037698 924 ntTSL 1 (best) BASIC22.27■■□□□ 1.16
SgcgP82348 Bloc1s2-201ENSMUST00000079033 878 ntAPPRIS P1 TSL 1 (best) BASIC22.27■■□□□ 1.16
SgcgP82348 E2f1-201ENSMUST00000000894 2755 ntAPPRIS ALT2 TSL 1 (best) BASIC22.27■■□□□ 1.15
SgcgP82348 Mpp6-209ENSMUST00000204545 2418 ntAPPRIS P1 TSL 5 BASIC22.26■■□□□ 1.15
SgcgP82348 Slc39a13-203ENSMUST00000111436 1291 ntTSL 1 (best) BASIC22.26■■□□□ 1.15
SgcgP82348 Krtap28-10-201ENSMUST00000188323 957 ntAPPRIS P1 BASIC22.26■■□□□ 1.15
SgcgP82348 Panx2-202ENSMUST00000161372 2314 ntTSL 1 (best) BASIC22.26■■□□□ 1.15
SgcgP82348 Cadps-201ENSMUST00000067491 5421 ntAPPRIS P4 TSL 1 (best) BASIC22.26■■□□□ 1.15
SgcgP82348 Nrsn1-201ENSMUST00000057866 2222 ntAPPRIS P1 TSL 1 (best) BASIC22.25■■□□□ 1.15
SgcgP82348 Gm5067-201ENSMUST00000170449 1009 ntBASIC22.25■■□□□ 1.15
SgcgP82348 A830092H15Rik-201ENSMUST00000099182 1229 ntBASIC22.25■■□□□ 1.15
SgcgP82348 Peg12-201ENSMUST00000094339 2640 ntAPPRIS P1 BASIC22.25■■□□□ 1.15
SgcgP82348 Nudt3-203ENSMUST00000114886 996 ntTSL 2 BASIC22.24■■□□□ 1.15
SgcgP82348 Kcnj6-201ENSMUST00000095873 1773 ntTSL 1 (best) BASIC22.24■■□□□ 1.15
SgcgP82348 Scn1b-201ENSMUST00000098548 1573 ntAPPRIS P1 TSL 1 (best) BASIC22.24■■□□□ 1.15
SgcgP82348 Kansl2-201ENSMUST00000023727 2311 ntAPPRIS ALT2 TSL 5 BASIC22.24■■□□□ 1.15
SgcgP82348 Mapkap1-202ENSMUST00000113124 1758 ntAPPRIS ALT1 TSL 5 BASIC22.23■■□□□ 1.15
SgcgP82348 Btf3l4-203ENSMUST00000102741 1033 ntAPPRIS P1 TSL 1 (best) BASIC22.23■■□□□ 1.15
SgcgP82348 Gm10420-201ENSMUST00000121713 882 ntBASIC22.23■■□□□ 1.15
SgcgP82348 Sft2d1-210ENSMUST00000154553 1049 ntAPPRIS P1 TSL 1 (best) BASIC22.23■■□□□ 1.15
SgcgP82348 Rasgef1c-203ENSMUST00000093142 2216 ntAPPRIS P3 TSL 1 (best) BASIC22.23■■□□□ 1.15
SgcgP82348 Cln6-201ENSMUST00000034776 2142 ntAPPRIS P1 TSL 1 (best) BASIC22.22■■□□□ 1.15
SgcgP82348 Gm38287-201ENSMUST00000195193 2051 ntTSL 3 BASIC22.22■■□□□ 1.15
SgcgP82348 Csrp1-201ENSMUST00000027677 1823 ntAPPRIS P1 TSL 1 (best) BASIC22.22■■□□□ 1.15
SgcgP82348 Csrp1-202ENSMUST00000097561 1828 ntAPPRIS P1 TSL 1 (best) BASIC22.22■■□□□ 1.15
SgcgP82348 Hpf1-204ENSMUST00000146863 531 ntTSL 2 BASIC22.21■■□□□ 1.15
SgcgP82348 D17Wsu92e-201ENSMUST00000075076 1470 ntTSL 1 (best) BASIC22.21■■□□□ 1.15
SgcgP82348 Fam220a-201ENSMUST00000067145 2198 ntAPPRIS P1 TSL 1 (best) BASIC22.21■■□□□ 1.15
SgcgP82348 Emc8-208ENSMUST00000181950 747 ntTSL 2 BASIC22.2■■□□□ 1.14
SgcgP82348 Lsm4-205ENSMUST00000210987 636 ntTSL 5 BASIC22.2■■□□□ 1.14
SgcgP82348 St7-205ENSMUST00000081635 2115 ntTSL 1 (best) BASIC22.2■■□□□ 1.14
SgcgP82348 Ei24-201ENSMUST00000115086 2220 ntAPPRIS P1 TSL 1 (best) BASIC22.2■■□□□ 1.14
SgcgP82348 Slc44a1-203ENSMUST00000107646 1974 ntTSL 5 BASIC22.19■■□□□ 1.14
SgcgP82348 Sdccag3-202ENSMUST00000077983 1955 ntAPPRIS ALT2 TSL 1 (best) BASIC22.19■■□□□ 1.14
SgcgP82348 Shox2-204ENSMUST00000162439 1081 ntTSL 1 (best) BASIC22.19■■□□□ 1.14
SgcgP82348 Ipmk-203ENSMUST00000121446 1492 ntAPPRIS ALT2 TSL 5 BASIC22.19■■□□□ 1.14
SgcgP82348 Olfm2-203ENSMUST00000215999 1895 ntAPPRIS ALT2 TSL 3 BASIC22.19■■□□□ 1.14
SgcgP82348 Prph-202ENSMUST00000047104 1865 ntAPPRIS P3 TSL 1 (best) BASIC22.19■■□□□ 1.14
SgcgP82348 Nrep-202ENSMUST00000168890 2185 ntAPPRIS P1 TSL 1 (best) BASIC22.19■■□□□ 1.14
SgcgP82348 Gm10499-202ENSMUST00000174778 1698 ntTSL 1 (best) BASIC22.18■■□□□ 1.14
SgcgP82348 Htatsf1-202ENSMUST00000114751 1128 ntTSL 1 (best) BASIC22.18■■□□□ 1.14
SgcgP82348 Aldoa-214ENSMUST00000207534 741 ntAPPRIS P1 TSL 5 BASIC22.18■■□□□ 1.14
SgcgP82348 Tmem11-201ENSMUST00000062677 1457 ntAPPRIS P1 TSL 1 (best) BASIC22.17■■□□□ 1.14
SgcgP82348 Sike1-202ENSMUST00000119450 774 ntTSL 3 BASIC22.17■■□□□ 1.14
SgcgP82348 Cyp2r1-202ENSMUST00000119712 917 ntTSL 5 BASIC22.17■■□□□ 1.14
SgcgP82348 Pgls-201ENSMUST00000034264 893 ntAPPRIS P1 TSL 1 (best) BASIC22.17■■□□□ 1.14
SgcgP82348 Galr3-201ENSMUST00000058004 1245 ntAPPRIS P1 TSL 1 (best) BASIC22.17■■□□□ 1.14
SgcgP82348 2510039O18Rik-201ENSMUST00000103232 2731 ntAPPRIS P1 TSL 1 (best) BASIC22.16■■□□□ 1.14
SgcgP82348 Tmem260-208ENSMUST00000226400 2281 ntAPPRIS ALT2 BASIC22.16■■□□□ 1.14
SgcgP82348 Nans-201ENSMUST00000030018 2179 ntAPPRIS P1 TSL 1 (best) BASIC22.16■■□□□ 1.14
SgcgP82348 Mxra7-201ENSMUST00000021170 2063 ntAPPRIS P3 TSL 1 (best) BASIC22.16■■□□□ 1.14
SgcgP82348 St6galnac6-204ENSMUST00000095045 2536 ntAPPRIS ALT1 TSL 1 (best) BASIC22.16■■□□□ 1.14
SgcgP82348 Siah1a-201ENSMUST00000045296 1968 ntAPPRIS P1 TSL 1 (best) BASIC22.16■■□□□ 1.14
SgcgP82348 Ei24-202ENSMUST00000163192 2309 ntAPPRIS P1 TSL 1 (best) BASIC22.15■■□□□ 1.14
SgcgP82348 Smurf1-203ENSMUST00000110677 5420 ntTSL 5 BASIC22.15■■□□□ 1.14
SgcgP82348 Tspan33-202ENSMUST00000115250 1977 ntAPPRIS ALT1 TSL 1 (best) BASIC22.14■■□□□ 1.14
SgcgP82348 Hnrnpul1-202ENSMUST00000108401 1240 ntTSL 1 (best) BASIC22.14■■□□□ 1.13
SgcgP82348 Ppp1r35-201ENSMUST00000031739 956 ntAPPRIS P1 TSL 1 (best) BASIC22.13■■□□□ 1.13
SgcgP82348 H1fx-201ENSMUST00000056403 1217 ntAPPRIS P1 BASIC22.13■■□□□ 1.13
SgcgP82348 Igfbp3-202ENSMUST00000135887 1709 ntAPPRIS P1 TSL 1 (best) BASIC22.13■■□□□ 1.13
SgcgP82348 Usp2-206ENSMUST00000176416 1486 ntAPPRIS ALT2 TSL 1 (best) BASIC22.13■■□□□ 1.13
SgcgP82348 Slc25a33-201ENSMUST00000105686 1887 ntAPPRIS P1 TSL 1 (best) BASIC22.13■■□□□ 1.13
SgcgP82348 Amigo1-201ENSMUST00000050909 5030 ntAPPRIS P1 TSL 1 (best) BASIC22.13■■□□□ 1.13
SgcgP82348 B230377A18Rik-202ENSMUST00000192921 1364 ntBASIC22.12■■□□□ 1.13
SgcgP82348 Fzd9-201ENSMUST00000062572 2293 ntAPPRIS P1 BASIC22.12■■□□□ 1.13
SgcgP82348 Tmem106c-201ENSMUST00000064200 1635 ntAPPRIS P1 TSL 1 (best) BASIC22.12■■□□□ 1.13
SgcgP82348 Otud5-205ENSMUST00000115668 2543 ntTSL 1 (best) BASIC22.12■■□□□ 1.13
SgcgP82348 Znrf2-201ENSMUST00000079869 5886 ntAPPRIS P1 TSL 1 (best) BASIC22.12■■□□□ 1.13
SgcgP82348 Ttc9-201ENSMUST00000036116 2042 ntAPPRIS P1 TSL 1 (best) BASIC22.11■■□□□ 1.13
SgcgP82348 Tsen34-204ENSMUST00000108630 1779 ntTSL 1 (best) BASIC22.11■■□□□ 1.13
SgcgP82348 Dnajc21-201ENSMUST00000136591 2060 ntAPPRIS P1 TSL 5 BASIC22.11■■□□□ 1.13
SgcgP82348 Tmem9b-201ENSMUST00000033333 1703 ntAPPRIS P2 TSL 1 (best) BASIC22.11■■□□□ 1.13
SgcgP82348 Srd5a3-201ENSMUST00000031143 1747 ntAPPRIS P2 TSL 1 (best) BASIC22.1■■□□□ 1.13
SgcgP82348 Fam168b-201ENSMUST00000047534 5030 ntAPPRIS P1 TSL 1 (best) BASIC22.1■■□□□ 1.13
SgcgP82348 Ryk-201ENSMUST00000035142 2852 ntAPPRIS ALT2 TSL 1 (best) BASIC22.1■■□□□ 1.13
SgcgP82348 Zdhhc2-205ENSMUST00000167766 1759 ntAPPRIS P1 TSL 1 (best) BASIC22.1■■□□□ 1.13
SgcgP82348 Foxk2-201ENSMUST00000106113 5029 ntAPPRIS P1 TSL 1 (best) BASIC22.09■■□□□ 1.13
SgcgP82348 Runx2-211ENSMUST00000162629 1607 ntAPPRIS ALT2 TSL 5 BASIC22.09■■□□□ 1.13
SgcgP82348 Sos2-201ENSMUST00000035773 5607 ntAPPRIS P2 TSL 5 BASIC22.09■■□□□ 1.13
SgcgP82348 AC164433.2-201ENSMUST00000226346 1701 ntBASIC22.09■■□□□ 1.13
SgcgP82348 Maz-204ENSMUST00000206254 2282 ntTSL 5 BASIC22.09■■□□□ 1.13
SgcgP82348 Nudt6-204ENSMUST00000108118 935 ntTSL 5 BASIC22.09■■□□□ 1.13
SgcgP82348 Nudt6-201ENSMUST00000052645 1155 ntAPPRIS ALT2 TSL 1 (best) BASIC22.09■■□□□ 1.13
SgcgP82348 Nudt6-202ENSMUST00000099130 1070 ntAPPRIS P3 TSL 1 (best) BASIC22.09■■□□□ 1.13
SgcgP82348 Efcc1-202ENSMUST00000159570 2293 ntAPPRIS P2 TSL 5 BASIC22.09■■□□□ 1.13
SgcgP82348 Crim1-201ENSMUST00000112498 5995 ntAPPRIS P1 TSL 1 (best) BASIC22.09■■□□□ 1.13
SgcgP82348 Zc3h6-201ENSMUST00000110319 1484 ntTSL 1 (best) BASIC22.09■■□□□ 1.13
SgcgP82348 Adgrb1-203ENSMUST00000185682 2744 ntTSL 1 (best) BASIC22.08■■□□□ 1.13
SgcgP82348 Snta1-201ENSMUST00000028991 2125 ntAPPRIS ALT2 TSL 1 (best) BASIC22.08■■□□□ 1.13
SgcgP82348 Lin7b-201ENSMUST00000003971 735 ntAPPRIS P1 TSL 1 (best) BASIC22.08■■□□□ 1.13
SgcgP82348 Ildr2-206ENSMUST00000194964 2467 ntAPPRIS ALT2 TSL 1 (best) BASIC22.08■■□□□ 1.13
SgcgP82348 Nhlrc1-201ENSMUST00000052747 2294 ntAPPRIS P1 BASIC22.08■■□□□ 1.12
SgcgP82348 Dapk2-201ENSMUST00000034944 1772 ntAPPRIS P1 TSL 1 (best) BASIC22.07■■□□□ 1.12
SgcgP82348 Fam92a-208ENSMUST00000177837 1325 ntAPPRIS ALT2 TSL 5 BASIC22.06■■□□□ 1.12
SgcgP82348 Hnrnpl-201ENSMUST00000038572 2142 ntAPPRIS P1 TSL 1 (best) BASIC22.06■■□□□ 1.12
SgcgP82348 Tm2d2-201ENSMUST00000033961 1281 ntAPPRIS P1 TSL 1 (best) BASIC22.06■■□□□ 1.12
Retrieved 100 of 76,532 protein–RNA pairs in 65.5 ms