Protein–RNA interactions for Protein: P54869

Hmgcs2, Hydroxymethylglutaryl-CoA synthase, mitochondrial, mousemouse

Predictions only

Length 508 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Hmgcs2P54869 Ube2k-206ENSMUST00000201984 1449 ntTSL 3 BASIC25.49■■□□□ 1.67
Hmgcs2P54869 B230377A18Rik-202ENSMUST00000192921 1364 ntBASIC25.49■■□□□ 1.67
Hmgcs2P54869 Tmx4-202ENSMUST00000110119 596 ntTSL 2 BASIC25.48■■□□□ 1.67
Hmgcs2P54869 March5-202ENSMUST00000112391 1293 ntTSL 1 (best) BASIC25.48■■□□□ 1.67
Hmgcs2P54869 Rin3-207ENSMUST00000150795 937 ntTSL 1 (best) BASIC25.48■■□□□ 1.67
Hmgcs2P54869 AC102554.1-201ENSMUST00000216236 537 ntTSL 5 BASIC25.48■■□□□ 1.67
Hmgcs2P54869 Ak2-201ENSMUST00000030583 986 ntAPPRIS P4 TSL 1 (best) BASIC25.48■■□□□ 1.67
Hmgcs2P54869 Ccna1-202ENSMUST00000197238 1719 ntAPPRIS P1 TSL 5 BASIC25.48■■□□□ 1.67
Hmgcs2P54869 Suds3-201ENSMUST00000086471 2425 ntAPPRIS P3 TSL 1 (best) BASIC25.47■■□□□ 1.67
Hmgcs2P54869 Mpnd-208ENSMUST00000159996 1444 ntAPPRIS ALT2 TSL 5 BASIC25.47■■□□□ 1.67
Hmgcs2P54869 Tmem70-203ENSMUST00000177501 1636 ntAPPRIS P3 TSL 1 (best) BASIC25.47■■□□□ 1.67
Hmgcs2P54869 Dusp2-201ENSMUST00000028846 1617 ntAPPRIS P1 TSL 1 (best) BASIC25.47■■□□□ 1.67
Hmgcs2P54869 Nucks1-203ENSMUST00000189946 2375 ntAPPRIS ALT2 TSL 1 (best) BASIC25.47■■□□□ 1.67
Hmgcs2P54869 Tmpo-203ENSMUST00000092219 1854 ntTSL 1 (best) BASIC25.47■■□□□ 1.67
Hmgcs2P54869 Kcnj6-201ENSMUST00000095873 1773 ntTSL 1 (best) BASIC25.46■■□□□ 1.67
Hmgcs2P54869 Fgf16-201ENSMUST00000033581 1645 ntAPPRIS P1 TSL 1 (best) BASIC25.46■■□□□ 1.67
Hmgcs2P54869 Gng12-203ENSMUST00000114224 680 ntAPPRIS P1 TSL 3 BASIC25.46■■□□□ 1.67
Hmgcs2P54869 Gng12-206ENSMUST00000114227 1125 ntAPPRIS P1 TSL 1 (best) BASIC25.46■■□□□ 1.67
Hmgcs2P54869 Vax1-201ENSMUST00000172821 1044 ntAPPRIS P1 TSL 1 (best) BASIC25.46■■□□□ 1.67
Hmgcs2P54869 Upf3a-201ENSMUST00000043767 2057 ntAPPRIS P1 TSL 1 (best) BASIC25.46■■□□□ 1.67
Hmgcs2P54869 Preb-209ENSMUST00000202567 1869 ntTSL 1 (best) BASIC25.45■■□□□ 1.67
Hmgcs2P54869 Fam98c-209ENSMUST00000164589 1293 ntAPPRIS P1 TSL 5 BASIC25.45■■□□□ 1.66
Hmgcs2P54869 Gm43566-201ENSMUST00000196851 808 ntBASIC25.45■■□□□ 1.66
Hmgcs2P54869 H2afj-202ENSMUST00000203982 577 ntAPPRIS ALT1 TSL 3 BASIC25.45■■□□□ 1.66
Hmgcs2P54869 Vmac-201ENSMUST00000067931 2174 ntAPPRIS P3 TSL 1 (best) BASIC25.44■■□□□ 1.66
Hmgcs2P54869 Isoc1-201ENSMUST00000025503 2563 ntAPPRIS P1 TSL 1 (best) BASIC25.44■■□□□ 1.66
Hmgcs2P54869 Gm28417-202ENSMUST00000185881 538 ntTSL 3 BASIC25.44■■□□□ 1.66
Hmgcs2P54869 AC164424.2-201ENSMUST00000223281 725 ntTSL 3 BASIC25.44■■□□□ 1.66
Hmgcs2P54869 Gng12-204ENSMUST00000114225 1876 ntAPPRIS P1 TSL 1 (best) BASIC25.44■■□□□ 1.66
Hmgcs2P54869 Tm6sf1-201ENSMUST00000041890 2226 ntAPPRIS P1 TSL 1 (best) BASIC25.44■■□□□ 1.66
Hmgcs2P54869 Gm15820-201ENSMUST00000201566 728 ntBASIC25.43■■□□□ 1.66
Hmgcs2P54869 Pcsk1n-201ENSMUST00000041096 2193 ntAPPRIS P1 TSL 1 (best) BASIC25.43■■□□□ 1.66
Hmgcs2P54869 Msto1-202ENSMUST00000126245 1875 ntAPPRIS P1 TSL 1 (best) BASIC25.43■■□□□ 1.66
Hmgcs2P54869 Srcap-211ENSMUST00000189136 1960 ntTSL 1 (best) BASIC25.42■■□□□ 1.66
Hmgcs2P54869 AC093043.1-201ENSMUST00000226700 898 ntBASIC25.42■■□□□ 1.66
Hmgcs2P54869 Mpv17l2-201ENSMUST00000038626 980 ntAPPRIS P1 TSL 1 (best) BASIC25.42■■□□□ 1.66
Hmgcs2P54869 Tmem106c-201ENSMUST00000064200 1635 ntAPPRIS P1 TSL 1 (best) BASIC25.41■■□□□ 1.66
Hmgcs2P54869 Cckbr-202ENSMUST00000181339 1326 ntTSL 1 (best) BASIC25.41■■□□□ 1.66
Hmgcs2P54869 Arhgap39-204ENSMUST00000176219 542 ntTSL 5 BASIC25.41■■□□□ 1.66
Hmgcs2P54869 Gm45444-201ENSMUST00000211394 898 ntBASIC25.41■■□□□ 1.66
Hmgcs2P54869 Fam149b-203ENSMUST00000090499 2370 ntAPPRIS P4 TSL 1 (best) BASIC25.41■■□□□ 1.66
Hmgcs2P54869 Syce2-202ENSMUST00000136026 1686 ntAPPRIS P3 TSL 1 (best) BASIC25.41■■□□□ 1.66
Hmgcs2P54869 Asf1a-201ENSMUST00000020004 2201 ntAPPRIS P1 TSL 1 (best) BASIC25.41■■□□□ 1.66
Hmgcs2P54869 Sox17-202ENSMUST00000116652 1512 ntAPPRIS P1 TSL 1 (best) BASIC25.41■■□□□ 1.66
Hmgcs2P54869 Tmem55b-206ENSMUST00000161166 1445 ntTSL 1 (best) BASIC25.4■■□□□ 1.66
Hmgcs2P54869 Csnk1g2-201ENSMUST00000079773 2348 ntTSL 1 (best) BASIC25.4■■□□□ 1.66
Hmgcs2P54869 Gsc2-201ENSMUST00000012279 1172 ntAPPRIS P1 TSL 1 (best) BASIC25.39■■□□□ 1.66
Hmgcs2P54869 Sarnp-203ENSMUST00000219512 953 ntTSL 3 BASIC25.39■■□□□ 1.66
Hmgcs2P54869 St7-205ENSMUST00000081635 2115 ntTSL 1 (best) BASIC25.39■■□□□ 1.65
Hmgcs2P54869 Unc119-201ENSMUST00000002127 1329 ntAPPRIS P1 TSL 1 (best) BASIC25.38■■□□□ 1.65
Hmgcs2P54869 Ubp1-203ENSMUST00000116492 2111 ntAPPRIS ALT1 TSL 1 (best) BASIC25.38■■□□□ 1.65
Hmgcs2P54869 2410017I17Rik-202ENSMUST00000090537 2053 ntTSL 2 BASIC25.37■■□□□ 1.65
Hmgcs2P54869 Jmjd6-201ENSMUST00000047616 1668 ntAPPRIS P1 TSL 1 (best) BASIC25.37■■□□□ 1.65
Hmgcs2P54869 Casd1-204ENSMUST00000181734 1063 ntTSL 5 BASIC25.37■■□□□ 1.65
Hmgcs2P54869 Fezf2-202ENSMUST00000224023 1917 ntBASIC25.37■■□□□ 1.65
Hmgcs2P54869 Npas1-201ENSMUST00000002053 2091 ntAPPRIS P1 TSL 5 BASIC25.36■■□□□ 1.65
Hmgcs2P54869 A430027H14Rik-201ENSMUST00000191809 1467 ntBASIC25.36■■□□□ 1.65
Hmgcs2P54869 Ppia-202ENSMUST00000132846 1170 ntAPPRIS P1 TSL 1 (best) BASIC25.35■■□□□ 1.65
Hmgcs2P54869 Fam168b-204ENSMUST00000170092 941 ntTSL 5 BASIC25.35■■□□□ 1.65
Hmgcs2P54869 Gm45095-201ENSMUST00000206736 254 ntTSL 5 BASIC25.35■■□□□ 1.65
Hmgcs2P54869 A930002H24Rik-201ENSMUST00000050753 492 ntAPPRIS P1 BASIC25.35■■□□□ 1.65
Hmgcs2P54869 Cadm1-209ENSMUST00000152459 1784 ntTSL 1 (best) BASIC25.35■■□□□ 1.65
Hmgcs2P54869 Exosc8-201ENSMUST00000029316 1300 ntAPPRIS P1 TSL 1 (best) BASIC25.35■■□□□ 1.65
Hmgcs2P54869 Siah1a-201ENSMUST00000045296 1968 ntAPPRIS P1 TSL 1 (best) BASIC25.35■■□□□ 1.65
Hmgcs2P54869 Efna2-201ENSMUST00000003154 2131 ntAPPRIS P1 TSL 1 (best) BASIC25.34■■□□□ 1.65
Hmgcs2P54869 Gm16599-201ENSMUST00000148082 1182 ntTSL 1 (best) BASIC25.34■■□□□ 1.65
Hmgcs2P54869 Srcap-202ENSMUST00000098025 1257 ntTSL 5 BASIC25.34■■□□□ 1.65
Hmgcs2P54869 Tmem235-201ENSMUST00000093905 1820 ntAPPRIS P1 TSL 5 BASIC25.34■■□□□ 1.65
Hmgcs2P54869 Neurog2-201ENSMUST00000029587 2227 ntAPPRIS P1 TSL 1 (best) BASIC25.33■■□□□ 1.65
Hmgcs2P54869 Fn1-208ENSMUST00000186940 1350 ntTSL 1 (best) BASIC25.33■■□□□ 1.65
Hmgcs2P54869 Socs2-202ENSMUST00000119917 948 ntAPPRIS P1 TSL 1 (best) BASIC25.33■■□□□ 1.65
Hmgcs2P54869 Btg3-201ENSMUST00000023570 1414 ntAPPRIS P1 TSL 1 (best) BASIC25.33■■□□□ 1.65
Hmgcs2P54869 5031425E22Rik-201ENSMUST00000101522 2110 ntBASIC25.33■■□□□ 1.64
Hmgcs2P54869 Dlg1-203ENSMUST00000100001 4711 ntAPPRIS ALT2 TSL 5 BASIC25.32■■□□□ 1.64
Hmgcs2P54869 2310061I04Rik-202ENSMUST00000146451 2081 ntTSL 1 (best) BASIC25.32■■□□□ 1.64
Hmgcs2P54869 Ndfip1-201ENSMUST00000025293 930 ntAPPRIS P1 TSL 1 (best) BASIC25.32■■□□□ 1.64
Hmgcs2P54869 Mt2-201ENSMUST00000034214 511 ntAPPRIS P1 TSL 1 (best) BASIC25.32■■□□□ 1.64
Hmgcs2P54869 Frat2-201ENSMUST00000059231 2161 ntAPPRIS P1 BASIC25.31■■□□□ 1.64
Hmgcs2P54869 Susd3-203ENSMUST00000119721 1249 ntAPPRIS ALT2 TSL 1 (best) BASIC25.31■■□□□ 1.64
Hmgcs2P54869 0610009L18Rik-201ENSMUST00000143813 619 ntTSL 2 BASIC25.31■■□□□ 1.64
Hmgcs2P54869 Hrasls-204ENSMUST00000162747 854 ntAPPRIS P1 TSL 1 (best) BASIC25.31■■□□□ 1.64
Hmgcs2P54869 Gm20684-201ENSMUST00000176744 380 ntTSL 3 BASIC25.31■■□□□ 1.64
Hmgcs2P54869 Gm28040-202ENSMUST00000184603 890 ntAPPRIS P1 TSL 2 BASIC25.31■■□□□ 1.64
Hmgcs2P54869 Clpp-201ENSMUST00000002735 1207 ntAPPRIS P1 TSL 1 (best) BASIC25.31■■□□□ 1.64
Hmgcs2P54869 Cldnd1-204ENSMUST00000162057 1540 ntAPPRIS P1 TSL 5 BASIC25.31■■□□□ 1.64
Hmgcs2P54869 Pmpca-202ENSMUST00000114093 1638 ntTSL 1 (best) BASIC25.3■■□□□ 1.64
Hmgcs2P54869 Srd5a3-201ENSMUST00000031143 1747 ntAPPRIS P2 TSL 1 (best) BASIC25.3■■□□□ 1.64
Hmgcs2P54869 Zfp346-203ENSMUST00000159278 1253 ntAPPRIS ALT2 TSL 5 BASIC25.3■■□□□ 1.64
Hmgcs2P54869 Rps24-207ENSMUST00000224568 714 ntBASIC25.3■■□□□ 1.64
Hmgcs2P54869 Bri3-201ENSMUST00000056578 955 ntAPPRIS P1 TSL 1 (best) BASIC25.3■■□□□ 1.64
Hmgcs2P54869 Pcf11-204ENSMUST00000208058 461 ntTSL 5 BASIC25.28■■□□□ 1.64
Hmgcs2P54869 Rpl34-201ENSMUST00000062601 624 ntAPPRIS P1 TSL 1 (best) BASIC25.28■■□□□ 1.64
Hmgcs2P54869 March2-203ENSMUST00000172767 1381 ntAPPRIS P1 TSL 1 (best) BASIC25.28■■□□□ 1.64
Hmgcs2P54869 Adat3-204ENSMUST00000038411 1411 ntAPPRIS P1 TSL 2 BASIC25.28■■□□□ 1.64
Hmgcs2P54869 Tmem55b-209ENSMUST00000162957 1465 ntTSL 1 (best) BASIC25.28■■□□□ 1.64
Hmgcs2P54869 Gm15039-201ENSMUST00000118914 875 ntBASIC25.27■■□□□ 1.64
Hmgcs2P54869 1700065D16Rik-202ENSMUST00000188975 506 ntTSL 3 BASIC25.27■■□□□ 1.64
Hmgcs2P54869 Vcpkmt-201ENSMUST00000058639 1027 ntAPPRIS P1 TSL 1 (best) BASIC25.27■■□□□ 1.64
Hmgcs2P54869 C1qtnf5-203ENSMUST00000114818 1337 ntAPPRIS P1 TSL 5 BASIC25.27■■□□□ 1.64
Hmgcs2P54869 Cnnm3-201ENSMUST00000001166 5193 ntAPPRIS P4 TSL 1 (best) BASIC25.27■■□□□ 1.64
Retrieved 100 of 76,532 protein–RNA pairs in 77.3 ms