Protein–RNA interactions for Protein: P39689

Cdkn1a, Cyclin-dependent kinase inhibitor 1, mousemouse

Predictions only

Length 159 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cdkn1aP39689 Kansl2-201ENSMUST00000023727 2311 ntAPPRIS ALT2 TSL 5 BASIC18.64■□□□□ 0.57
Cdkn1aP39689 Mpp6-209ENSMUST00000204545 2418 ntAPPRIS P1 TSL 5 BASIC18.64■□□□□ 0.57
Cdkn1aP39689 Csrp1-201ENSMUST00000027677 1823 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
Cdkn1aP39689 Csrp1-202ENSMUST00000097561 1828 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
Cdkn1aP39689 Slc44a1-203ENSMUST00000107646 1974 ntTSL 5 BASIC18.62■□□□□ 0.57
Cdkn1aP39689 Nrep-202ENSMUST00000168890 2185 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
Cdkn1aP39689 Gm10499-202ENSMUST00000174778 1698 ntTSL 1 (best) BASIC18.61■□□□□ 0.57
Cdkn1aP39689 Rab4a-202ENSMUST00000118535 1419 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
Cdkn1aP39689 Crim1-201ENSMUST00000112498 5995 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
Cdkn1aP39689 Cln6-201ENSMUST00000034776 2142 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
Cdkn1aP39689 E2f1-201ENSMUST00000000894 2755 ntAPPRIS ALT2 TSL 1 (best) BASIC18.6■□□□□ 0.57
Cdkn1aP39689 Tsc22d1-204ENSMUST00000110888 4999 ntTSL 1 (best) BASIC18.6■□□□□ 0.57
Cdkn1aP39689 Rasgef1c-203ENSMUST00000093142 2216 ntAPPRIS P3 TSL 1 (best) BASIC18.6■□□□□ 0.57
Cdkn1aP39689 Nudt3-203ENSMUST00000114886 996 ntTSL 2 BASIC18.6■□□□□ 0.57
Cdkn1aP39689 Ildr2-202ENSMUST00000192426 1238 ntTSL 1 (best) BASIC18.6■□□□□ 0.57
Cdkn1aP39689 Cbr3-201ENSMUST00000039620 1170 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
Cdkn1aP39689 Rab4b-201ENSMUST00000093040 1192 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
Cdkn1aP39689 Sdccag3-202ENSMUST00000077983 1955 ntAPPRIS ALT2 TSL 1 (best) BASIC18.6■□□□□ 0.57
Cdkn1aP39689 Fam220a-201ENSMUST00000067145 2198 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
Cdkn1aP39689 Peg12-201ENSMUST00000094339 2640 ntAPPRIS P1 BASIC18.59■□□□□ 0.57
Cdkn1aP39689 Jag2-201ENSMUST00000075827 5106 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
Cdkn1aP39689 Slc25a33-201ENSMUST00000105686 1887 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
Cdkn1aP39689 Prph-202ENSMUST00000047104 1865 ntAPPRIS P3 TSL 1 (best) BASIC18.59■□□□□ 0.57
Cdkn1aP39689 Gm20109-201ENSMUST00000180802 671 ntTSL 1 (best) BASIC18.59■□□□□ 0.57
Cdkn1aP39689 Ei24-202ENSMUST00000163192 2309 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.57
Cdkn1aP39689 Tmem11-201ENSMUST00000062677 1457 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.57
Cdkn1aP39689 Gm5067-201ENSMUST00000170449 1009 ntBASIC18.58■□□□□ 0.56
Cdkn1aP39689 Lsm4-205ENSMUST00000210987 636 ntTSL 5 BASIC18.58■□□□□ 0.56
Cdkn1aP39689 Galr3-201ENSMUST00000058004 1245 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.56
Cdkn1aP39689 Scn1b-201ENSMUST00000098548 1573 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.56
Cdkn1aP39689 Sos2-201ENSMUST00000035773 5607 ntAPPRIS P2 TSL 5 BASIC18.58■□□□□ 0.56
Cdkn1aP39689 Nans-201ENSMUST00000030018 2179 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.56
Cdkn1aP39689 B230377A18Rik-202ENSMUST00000192921 1364 ntBASIC18.57■□□□□ 0.56
Cdkn1aP39689 Tmem260-208ENSMUST00000226400 2281 ntAPPRIS ALT2 BASIC18.57■□□□□ 0.56
Cdkn1aP39689 Gm10420-201ENSMUST00000121713 882 ntBASIC18.57■□□□□ 0.56
Cdkn1aP39689 Vegfa-211ENSMUST00000167860 975 ntTSL 1 (best) BASIC18.57■□□□□ 0.56
Cdkn1aP39689 Krtap28-10-201ENSMUST00000188323 957 ntAPPRIS P1 BASIC18.57■□□□□ 0.56
Cdkn1aP39689 Vegfa-212ENSMUST00000214739 1107 ntAPPRIS ALT2 TSL 1 (best) BASIC18.57■□□□□ 0.56
Cdkn1aP39689 Vegfa-213ENSMUST00000217017 1179 ntAPPRIS P4 TSL 1 (best) BASIC18.57■□□□□ 0.56
Cdkn1aP39689 Hnrnpl-201ENSMUST00000038572 2142 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
Cdkn1aP39689 St7-205ENSMUST00000081635 2115 ntTSL 1 (best) BASIC18.57■□□□□ 0.56
Cdkn1aP39689 A830092H15Rik-201ENSMUST00000099182 1229 ntBASIC18.57■□□□□ 0.56
Cdkn1aP39689 Gm38287-201ENSMUST00000195193 2051 ntTSL 3 BASIC18.57■□□□□ 0.56
Cdkn1aP39689 Tspan33-202ENSMUST00000115250 1977 ntAPPRIS ALT1 TSL 1 (best) BASIC18.57■□□□□ 0.56
Cdkn1aP39689 Mxra7-201ENSMUST00000021170 2063 ntAPPRIS P3 TSL 1 (best) BASIC18.56■□□□□ 0.56
Cdkn1aP39689 Tsen34-204ENSMUST00000108630 1779 ntTSL 1 (best) BASIC18.56■□□□□ 0.56
Cdkn1aP39689 Gm7276-201ENSMUST00000097520 1252 ntAPPRIS P1 BASIC18.56■□□□□ 0.56
Cdkn1aP39689 D17Wsu92e-201ENSMUST00000075076 1470 ntTSL 1 (best) BASIC18.56■□□□□ 0.56
Cdkn1aP39689 Dbndd2-202ENSMUST00000069385 1658 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
Cdkn1aP39689 Olfm2-203ENSMUST00000215999 1895 ntAPPRIS ALT2 TSL 3 BASIC18.56■□□□□ 0.56
Cdkn1aP39689 Ei24-201ENSMUST00000115086 2220 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
Cdkn1aP39689 Hpf1-204ENSMUST00000146863 531 ntTSL 2 BASIC18.55■□□□□ 0.56
Cdkn1aP39689 Sft2d1-210ENSMUST00000154553 1049 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
Cdkn1aP39689 Emc8-208ENSMUST00000181950 747 ntTSL 2 BASIC18.55■□□□□ 0.56
Cdkn1aP39689 Bloc1s2-201ENSMUST00000079033 878 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
Cdkn1aP39689 Fzd9-201ENSMUST00000062572 2293 ntAPPRIS P1 BASIC18.54■□□□□ 0.56
Cdkn1aP39689 Btf3l4-203ENSMUST00000102741 1033 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
Cdkn1aP39689 Slc39a13-203ENSMUST00000111436 1291 ntTSL 1 (best) BASIC18.54■□□□□ 0.56
Cdkn1aP39689 Htatsf1-202ENSMUST00000114751 1128 ntTSL 1 (best) BASIC18.54■□□□□ 0.56
Cdkn1aP39689 Maz-204ENSMUST00000206254 2282 ntTSL 5 BASIC18.54■□□□□ 0.56
Cdkn1aP39689 2510039O18Rik-201ENSMUST00000103232 2731 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
Cdkn1aP39689 Ttc9-201ENSMUST00000036116 2042 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
Cdkn1aP39689 Ipmk-203ENSMUST00000121446 1492 ntAPPRIS ALT2 TSL 5 BASIC18.53■□□□□ 0.56
Cdkn1aP39689 Usp2-206ENSMUST00000176416 1486 ntAPPRIS ALT2 TSL 1 (best) BASIC18.53■□□□□ 0.56
Cdkn1aP39689 Tmem106c-201ENSMUST00000064200 1635 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
Cdkn1aP39689 Fam149b-201ENSMUST00000037698 924 ntTSL 1 (best) BASIC18.53■□□□□ 0.56
Cdkn1aP39689 Ddrgk1-201ENSMUST00000089559 1238 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
Cdkn1aP39689 Siah1a-201ENSMUST00000045296 1968 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
Cdkn1aP39689 Srd5a3-201ENSMUST00000031143 1747 ntAPPRIS P2 TSL 1 (best) BASIC18.52■□□□□ 0.56
Cdkn1aP39689 Snta1-201ENSMUST00000028991 2125 ntAPPRIS ALT2 TSL 1 (best) BASIC18.52■□□□□ 0.56
Cdkn1aP39689 Cyp2r1-202ENSMUST00000119712 917 ntTSL 5 BASIC18.52■□□□□ 0.56
Cdkn1aP39689 Aldoa-214ENSMUST00000207534 741 ntAPPRIS P1 TSL 5 BASIC18.52■□□□□ 0.56
Cdkn1aP39689 Ctdspl-201ENSMUST00000073109 4589 ntAPPRIS P2 TSL 1 (best) BASIC18.52■□□□□ 0.56
Cdkn1aP39689 Hrk-201ENSMUST00000054836 5382 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.55
Cdkn1aP39689 Otud5-205ENSMUST00000115668 2543 ntTSL 1 (best) BASIC18.52■□□□□ 0.55
Cdkn1aP39689 St6galnac6-204ENSMUST00000095045 2536 ntAPPRIS ALT1 TSL 1 (best) BASIC18.51■□□□□ 0.55
Cdkn1aP39689 Efcc1-202ENSMUST00000159570 2293 ntAPPRIS P2 TSL 5 BASIC18.51■□□□□ 0.55
Cdkn1aP39689 Zdhhc2-205ENSMUST00000167766 1759 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
Cdkn1aP39689 Hnrnpul1-202ENSMUST00000108401 1240 ntTSL 1 (best) BASIC18.51■□□□□ 0.55
Cdkn1aP39689 Rmnd5a-201ENSMUST00000002292 6165 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
Cdkn1aP39689 Znrf2-201ENSMUST00000079869 5886 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
Cdkn1aP39689 Hdac2-201ENSMUST00000019911 2005 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
Cdkn1aP39689 Dnajc21-201ENSMUST00000136591 2060 ntAPPRIS P1 TSL 5 BASIC18.5■□□□□ 0.55
Cdkn1aP39689 Runx2-211ENSMUST00000162629 1607 ntAPPRIS ALT2 TSL 5 BASIC18.5■□□□□ 0.55
Cdkn1aP39689 Gdf7-202ENSMUST00000220073 1399 ntAPPRIS ALT2 TSL 1 (best) BASIC18.5■□□□□ 0.55
Cdkn1aP39689 Nhlrc1-201ENSMUST00000052747 2294 ntAPPRIS P1 BASIC18.49■□□□□ 0.55
Cdkn1aP39689 Shox2-204ENSMUST00000162439 1081 ntTSL 1 (best) BASIC18.49■□□□□ 0.55
Cdkn1aP39689 Ildr2-206ENSMUST00000194964 2467 ntAPPRIS ALT2 TSL 1 (best) BASIC18.49■□□□□ 0.55
Cdkn1aP39689 Tmem9b-201ENSMUST00000033333 1703 ntAPPRIS P2 TSL 1 (best) BASIC18.49■□□□□ 0.55
Cdkn1aP39689 Slc16a11-201ENSMUST00000094055 1788 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
Cdkn1aP39689 Adgrb1-203ENSMUST00000185682 2744 ntTSL 1 (best) BASIC18.48■□□□□ 0.55
Cdkn1aP39689 Rnf39-201ENSMUST00000040498 1579 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
Cdkn1aP39689 AC117769.4-201ENSMUST00000225679 685 ntBASIC18.48■□□□□ 0.55
Cdkn1aP39689 Pgls-201ENSMUST00000034264 893 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
Cdkn1aP39689 H1fx-201ENSMUST00000056403 1217 ntAPPRIS P1 BASIC18.48■□□□□ 0.55
Cdkn1aP39689 AC164433.2-201ENSMUST00000226346 1701 ntBASIC18.48■□□□□ 0.55
Cdkn1aP39689 Tmem235-201ENSMUST00000093905 1820 ntAPPRIS P1 TSL 5 BASIC18.47■□□□□ 0.55
Cdkn1aP39689 Epop-201ENSMUST00000052281 2314 ntAPPRIS P1 BASIC18.47■□□□□ 0.55
Cdkn1aP39689 Slc16a11-207ENSMUST00000136328 1403 ntTSL 5 BASIC18.47■□□□□ 0.55
Cdkn1aP39689 Ntn5-203ENSMUST00000183120 1491 ntTSL 1 (best) BASIC18.46■□□□□ 0.55
Retrieved 100 of 76,532 protein–RNA pairs in 20 ms