Protein–RNA interactions for Protein: P06320

T-cell receptor beta chain V region CTL-F3, mousemouse

Predictions only

Length 134 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
P06320 Mxra7-201ENSMUST00000021170 2063 ntAPPRIS P3 TSL 1 (best) BASIC14.19□□□□□ -0.14
P06320 Carm1-201ENSMUST00000034703 3220 ntAPPRIS P3 TSL 1 (best) BASIC14.19□□□□□ -0.14
P06320 H3f3aos-201ENSMUST00000097448 2905 ntBASIC14.19□□□□□ -0.14
P06320 Brf1-201ENSMUST00000011302 2615 ntAPPRIS P1 TSL 5 BASIC14.19□□□□□ -0.14
P06320 Lsr-201ENSMUST00000001279 2167 ntAPPRIS P3 TSL 1 (best) BASIC14.19□□□□□ -0.14
P06320 2310014F06Rik-201ENSMUST00000146145 1567 ntTSL 1 (best) BASIC14.19□□□□□ -0.14
P06320 Snf8-202ENSMUST00000107700 849 ntTSL 2 BASIC14.19□□□□□ -0.14
P06320 Gm42984-201ENSMUST00000195990 987 ntTSL 1 (best) BASIC14.19□□□□□ -0.14
P06320 Usp21-203ENSMUST00000111306 2185 ntAPPRIS ALT1 TSL 1 (best) BASIC14.19□□□□□ -0.14
P06320 Agps-202ENSMUST00000111952 2589 ntTSL 2 BASIC14.19□□□□□ -0.14
P06320 Ing1-201ENSMUST00000054399 2814 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
P06320 Fgf20-201ENSMUST00000034014 1476 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
P06320 Hmx3-201ENSMUST00000046093 1457 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
P06320 Ube4b-202ENSMUST00000103212 5626 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
P06320 Traf3ip1-203ENSMUST00000189341 2257 ntAPPRIS ALT2 TSL 5 BASIC14.18□□□□□ -0.14
P06320 Inafm2-201ENSMUST00000149978 3053 ntAPPRIS P1 BASIC14.18□□□□□ -0.14
P06320 Kansl1-205ENSMUST00000106977 5510 ntAPPRIS P2 TSL 1 (best) BASIC14.18□□□□□ -0.14
P06320 Cotl1-201ENSMUST00000034285 1596 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
P06320 Xylt1-201ENSMUST00000032892 9020 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
P06320 Gm16148-201ENSMUST00000119653 893 ntBASIC14.18□□□□□ -0.14
P06320 Hrh3-208ENSMUST00000171736 906 ntTSL 5 BASIC14.18□□□□□ -0.14
P06320 Ttc9-201ENSMUST00000036116 2042 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
P06320 Baz1a-201ENSMUST00000038926 6188 ntAPPRIS ALT2 TSL 5 BASIC14.17□□□□□ -0.14
P06320 Aard-201ENSMUST00000090025 1348 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
P06320 Zfp768-202ENSMUST00000205266 2513 ntAPPRIS ALT2 TSL 5 BASIC14.17□□□□□ -0.14
P06320 Ube2g2-204ENSMUST00000174510 2031 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
P06320 Etv4-202ENSMUST00000107176 2377 ntTSL 1 (best) BASIC14.17□□□□□ -0.14
P06320 Etv4-201ENSMUST00000017868 2395 ntAPPRIS ALT1 TSL 5 BASIC14.17□□□□□ -0.14
P06320 Junos-204ENSMUST00000128094 830 ntTSL 1 (best) BASIC14.17□□□□□ -0.14
P06320 Phf23-202ENSMUST00000101526 1706 ntAPPRIS ALT2 TSL 1 (best) BASIC14.17□□□□□ -0.14
P06320 Kcnk12-201ENSMUST00000055221 1936 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
P06320 Kif1bp-201ENSMUST00000065887 2472 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
P06320 Vkorc1l1-201ENSMUST00000051758 3112 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
P06320 Wnk2-205ENSMUST00000110097 6882 ntAPPRIS ALT2 TSL 5 BASIC14.17□□□□□ -0.14
P06320 Wnk2-203ENSMUST00000091623 6897 ntAPPRIS P4 TSL 5 BASIC14.17□□□□□ -0.14
P06320 Slc9a2-201ENSMUST00000027231 5019 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
P06320 Ajap1-201ENSMUST00000105646 3048 ntAPPRIS P1 TSL 5 BASIC14.16□□□□□ -0.14
P06320 Arhgef25-205ENSMUST00000218654 2475 ntTSL 5 BASIC14.16□□□□□ -0.14
P06320 Bcl11b-202ENSMUST00000109887 2522 ntAPPRIS ALT2 TSL 1 (best) BASIC14.16□□□□□ -0.14
P06320 Klc1-201ENSMUST00000084941 2504 ntAPPRIS P3 TSL 1 (best) BASIC14.16□□□□□ -0.14
P06320 Cobll1-204ENSMUST00000112430 4917 ntAPPRIS ALT2 TSL 1 (best) BASIC14.16□□□□□ -0.14
P06320 Lmo4-201ENSMUST00000120539 1669 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
P06320 Kansl1-204ENSMUST00000106972 5427 ntAPPRIS ALT2 TSL 5 BASIC14.16□□□□□ -0.14
P06320 Notum-202ENSMUST00000106177 2212 ntAPPRIS P1 TSL 5 BASIC14.15□□□□□ -0.14
P06320 Suz12-206ENSMUST00000163272 4303 ntAPPRIS ALT2 TSL 5 BASIC14.15□□□□□ -0.14
P06320 Hgh1-201ENSMUST00000023213 1959 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
P06320 Prph-202ENSMUST00000047104 1865 ntAPPRIS P3 TSL 1 (best) BASIC14.15□□□□□ -0.14
P06320 Znrf1-204ENSMUST00000171182 5466 ntTSL 3 BASIC14.15□□□□□ -0.14
P06320 Smarcad1-201ENSMUST00000031984 5168 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
P06320 Pde7a-202ENSMUST00000099195 6298 ntAPPRIS ALT1 TSL 1 (best) BASIC14.14□□□□□ -0.15
P06320 Gm37847-201ENSMUST00000192163 1497 ntBASIC14.14□□□□□ -0.15
P06320 Gm31748-201ENSMUST00000194938 1497 ntBASIC14.14□□□□□ -0.15
P06320 Purb-201ENSMUST00000179343 8319 ntAPPRIS P1 BASIC14.14□□□□□ -0.15
P06320 Rbm15b-201ENSMUST00000055843 6511 ntAPPRIS P1 BASIC14.14□□□□□ -0.15
P06320 Pdss1-201ENSMUST00000053729 1642 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
P06320 Hoxb9-201ENSMUST00000000010 2574 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
P06320 Homer1-207ENSMUST00000109494 2468 ntTSL 1 (best) BASIC14.14□□□□□ -0.15
P06320 Mppe1-201ENSMUST00000073054 2007 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
P06320 Kmt5a-201ENSMUST00000059580 2739 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
P06320 Gas7-203ENSMUST00000108681 1595 ntAPPRIS ALT2 TSL 5 BASIC14.13□□□□□ -0.15
P06320 A330041J22Rik-201ENSMUST00000150367 1825 ntTSL 1 (best) BASIC14.13□□□□□ -0.15
P06320 Ccdc142-201ENSMUST00000101254 2317 ntAPPRIS P1 TSL 5 BASIC14.13□□□□□ -0.15
P06320 Srp9-202ENSMUST00000111018 823 ntTSL 1 (best) BASIC14.13□□□□□ -0.15
P06320 Kcnip2-202ENSMUST00000079431 2302 ntAPPRIS ALT1 TSL 1 (best) BASIC14.13□□□□□ -0.15
P06320 Hoxa13-201ENSMUST00000047993 1309 ntAPPRIS ALT2 TSL 5 BASIC14.13□□□□□ -0.15
P06320 Zmynd12-201ENSMUST00000094819 1464 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
P06320 Coro1b-201ENSMUST00000008893 1888 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
P06320 BC037034-205ENSMUST00000159649 2093 ntTSL 1 (best) BASIC14.12□□□□□ -0.15
P06320 Gga1-201ENSMUST00000041587 3034 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
P06320 Mnx1-202ENSMUST00000165512 2245 ntAPPRIS P2 TSL 1 (best) BASIC14.12□□□□□ -0.15
P06320 Ube2e3-201ENSMUST00000028398 2249 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
P06320 Hdgfl3-202ENSMUST00000107305 5887 ntAPPRIS P2 TSL 1 (best) BASIC14.12□□□□□ -0.15
P06320 Mid2-201ENSMUST00000112988 2525 ntTSL 5 BASIC14.12□□□□□ -0.15
P06320 Npr3-205ENSMUST00000228603 2437 ntAPPRIS ALT2 BASIC14.12□□□□□ -0.15
P06320 Spsb3-202ENSMUST00000068508 2004 ntTSL 1 (best) BASIC14.12□□□□□ -0.15
P06320 Cpsf4-201ENSMUST00000070487 1606 ntTSL 1 (best) BASIC14.12□□□□□ -0.15
P06320 Kmt2b-201ENSMUST00000006470 8469 ntAPPRIS ALT2 TSL 5 BASIC14.11□□□□□ -0.15
P06320 Terf2-204ENSMUST00000133925 2666 ntAPPRIS P3 TSL 1 (best) BASIC14.11□□□□□ -0.15
P06320 Terf2-202ENSMUST00000068421 2667 ntAPPRIS ALT2 TSL 5 BASIC14.11□□□□□ -0.15
P06320 Mapk13-201ENSMUST00000004986 1392 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
P06320 Nsun2-208ENSMUST00000176485 2408 ntAPPRIS ALT2 TSL 5 BASIC14.11□□□□□ -0.15
P06320 Raver2-202ENSMUST00000106955 2893 ntAPPRIS ALT2 TSL 1 (best) BASIC14.11□□□□□ -0.15
P06320 Syt7-203ENSMUST00000169121 6834 ntTSL 5 BASIC14.11□□□□□ -0.15
P06320 Particl-201ENSMUST00000205370 1560 ntBASIC14.11□□□□□ -0.15
P06320 Soga1-201ENSMUST00000069098 7864 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
P06320 Tmed7-203ENSMUST00000151189 1348 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
P06320 Ubtf-201ENSMUST00000006754 3213 ntAPPRIS ALT2 TSL 1 (best) BASIC14.11□□□□□ -0.15
P06320 Fbxw4-201ENSMUST00000046869 2068 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
P06320 Wnt5b-203ENSMUST00000119369 2339 ntTSL 1 (best) BASIC14.1□□□□□ -0.15
P06320 Ppp3ca-202ENSMUST00000070198 4758 ntTSL 1 (best) BASIC14.1□□□□□ -0.15
P06320 Hand2-201ENSMUST00000040104 2351 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
P06320 Hunk-201ENSMUST00000065856 5009 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
P06320 Mmp24-201ENSMUST00000029141 4306 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
P06320 Fbxl14-201ENSMUST00000032094 2963 ntAPPRIS P1 BASIC14.09□□□□□ -0.15
P06320 Tab2-204ENSMUST00000146444 4380 ntAPPRIS P1 TSL 5 BASIC14.09□□□□□ -0.15
P06320 Gm42699-201ENSMUST00000198104 1657 ntBASIC14.09□□□□□ -0.15
P06320 Tmpo-203ENSMUST00000092219 1854 ntTSL 1 (best) BASIC14.09□□□□□ -0.15
P06320 Kif1c-205ENSMUST00000152618 1943 ntTSL 1 (best) BASIC14.09□□□□□ -0.15
P06320 Foxj2-201ENSMUST00000003238 5283 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
P06320 Iglon5-201ENSMUST00000107974 2622 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
Retrieved 100 of 76,532 protein–RNA pairs in 38.4 ms