Protein–RNA interactions for Protein: P04945

Ig kappa chain V-VI region NQ2-6.1, mousemouse

Predictions only

Length 108 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
P04945 Txnrd1-208ENSMUST00000219962 2297 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
P04945 Aspscr1-203ENSMUST00000106158 1690 ntTSL 5 BASIC19.4■□□□□ 0.7
P04945 Pdpk1-203ENSMUST00000115407 1730 ntTSL 5 BASIC19.4■□□□□ 0.7
P04945 Stradb-202ENSMUST00000114296 1348 ntTSL 1 (best) BASIC19.4■□□□□ 0.7
P04945 Snx7-201ENSMUST00000029639 2021 ntAPPRIS P2 TSL 1 (best) BASIC19.4■□□□□ 0.7
P04945 Tsen34-201ENSMUST00000038521 1365 ntAPPRIS P1 TSL 5 BASIC19.4■□□□□ 0.7
P04945 Prr5-202ENSMUST00000171460 1719 ntAPPRIS ALT2 TSL 1 (best) BASIC19.39■□□□□ 0.7
P04945 Lrrc24-201ENSMUST00000036247 1758 ntTSL 1 (best) BASIC19.39■□□□□ 0.7
P04945 Kcnj6-201ENSMUST00000095873 1773 ntTSL 1 (best) BASIC19.39■□□□□ 0.7
P04945 P3h3-201ENSMUST00000023958 2850 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.7
P04945 Ankrd49-205ENSMUST00000216037 1037 ntAPPRIS P1 TSL 2 BASIC19.39■□□□□ 0.69
P04945 Rfxap-201ENSMUST00000044373 2162 ntAPPRIS ALT2 TSL 1 (best) BASIC19.39■□□□□ 0.69
P04945 Krtap28-13-201ENSMUST00000188005 992 ntAPPRIS P1 BASIC19.38■□□□□ 0.69
P04945 Gm45364-201ENSMUST00000210883 159 ntBASIC19.38■□□□□ 0.69
P04945 Mthfd2l-201ENSMUST00000071652 2159 ntAPPRIS P1 TSL 5 BASIC19.38■□□□□ 0.69
P04945 Prph-201ENSMUST00000024249 1769 ntAPPRIS ALT2 TSL 1 (best) BASIC19.37■□□□□ 0.69
P04945 A830010M20Rik-207ENSMUST00000162298 1408 ntTSL 5 BASIC19.37■□□□□ 0.69
P04945 1700003F12Rik-202ENSMUST00000109709 704 ntAPPRIS ALT2 TSL 3 BASIC19.37■□□□□ 0.69
P04945 1700003F12Rik-201ENSMUST00000045116 704 ntAPPRIS P2 TSL 1 (best) BASIC19.37■□□□□ 0.69
P04945 Pard6a-201ENSMUST00000093195 1265 ntAPPRIS P3 TSL 1 (best) BASIC19.37■□□□□ 0.69
P04945 Lsr-201ENSMUST00000001279 2167 ntAPPRIS P3 TSL 1 (best) BASIC19.37■□□□□ 0.69
P04945 Gm11542-201ENSMUST00000126480 1511 ntTSL 1 (best) BASIC19.36■□□□□ 0.69
P04945 Tbr1-202ENSMUST00000102737 1406 ntTSL 2 BASIC19.36■□□□□ 0.69
P04945 AC061963.1-201ENSMUST00000213180 1765 ntTSL 5 BASIC19.36■□□□□ 0.69
P04945 Fbxw4-201ENSMUST00000046869 2068 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
P04945 Ptx3-201ENSMUST00000029421 1898 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
P04945 Gm2018-201ENSMUST00000140754 478 ntTSL 2 BASIC19.35■□□□□ 0.69
P04945 Irx1-201ENSMUST00000077337 2373 ntAPPRIS P2 TSL 1 (best) BASIC19.35■□□□□ 0.69
P04945 Kctd5-201ENSMUST00000017090 2443 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
P04945 Gimap1-205ENSMUST00000204168 1469 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
P04945 Frmd5-201ENSMUST00000110592 2222 ntAPPRIS P1 TSL 5 BASIC19.33■□□□□ 0.69
P04945 Cnnm3-202ENSMUST00000097776 5292 ntAPPRIS ALT2 TSL 1 (best) BASIC19.33■□□□□ 0.69
P04945 Srarp-201ENSMUST00000094544 905 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.68
P04945 Impdh1-201ENSMUST00000078155 2437 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.68
P04945 Azin2-203ENSMUST00000119354 1921 ntTSL 1 (best) BASIC19.33■□□□□ 0.68
P04945 Klhl22-201ENSMUST00000117192 2754 ntTSL 5 BASIC19.32■□□□□ 0.68
P04945 Henmt1-201ENSMUST00000059946 1998 ntAPPRIS P2 TSL 1 (best) BASIC19.32■□□□□ 0.68
P04945 Hoxb9-201ENSMUST00000000010 2574 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
P04945 Bean1-205ENSMUST00000212979 2131 ntAPPRIS P4 TSL 5 BASIC19.32■□□□□ 0.68
P04945 Pcbd2-201ENSMUST00000021958 544 ntTSL 1 (best) BASIC19.32■□□□□ 0.68
P04945 AC167019.3-201ENSMUST00000228225 1266 ntBASIC19.32■□□□□ 0.68
P04945 Ube2h-201ENSMUST00000094543 975 ntTSL 1 (best) BASIC19.32■□□□□ 0.68
P04945 Plpp5-201ENSMUST00000068916 1483 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
P04945 Slc16a11-207ENSMUST00000136328 1403 ntTSL 5 BASIC19.32■□□□□ 0.68
P04945 Arhgap9-201ENSMUST00000069548 1782 ntAPPRIS P2 TSL 1 (best) BASIC19.32■□□□□ 0.68
P04945 Mapk15-201ENSMUST00000089669 1929 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
P04945 Ctage5-211ENSMUST00000176322 2649 ntTSL 5 BASIC19.31■□□□□ 0.68
P04945 Msl2-202ENSMUST00000189616 2612 ntTSL 5 BASIC19.31■□□□□ 0.68
P04945 Armc10-201ENSMUST00000072896 2221 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
P04945 Ctage5-203ENSMUST00000170992 2785 ntTSL 1 (best) BASIC19.31■□□□□ 0.68
P04945 Nxph3-201ENSMUST00000058866 2099 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
P04945 Dact1-202ENSMUST00000150639 2448 ntAPPRIS P1 TSL 3 BASIC19.3■□□□□ 0.68
P04945 Purg-202ENSMUST00000078058 1795 ntTSL 1 (best) BASIC19.3■□□□□ 0.68
P04945 Gm9888-201ENSMUST00000150678 965 ntTSL 1 (best) BASIC19.3■□□□□ 0.68
P04945 AC164433.2-201ENSMUST00000226346 1701 ntBASIC19.3■□□□□ 0.68
P04945 Siah1a-201ENSMUST00000045296 1968 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
P04945 Lsm14b-201ENSMUST00000055485 2534 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
P04945 Tmem221-201ENSMUST00000052072 1604 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
P04945 Ubac1-201ENSMUST00000036509 1852 ntAPPRIS P2 TSL 1 (best) BASIC19.29■□□□□ 0.68
P04945 Ube2k-203ENSMUST00000201266 1449 ntTSL 5 BASIC19.29■□□□□ 0.68
P04945 Tmem235-201ENSMUST00000093905 1820 ntAPPRIS P1 TSL 5 BASIC19.29■□□□□ 0.68
P04945 Spats2-201ENSMUST00000063517 3065 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
P04945 Hccs-201ENSMUST00000033717 2320 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
P04945 Phf23-202ENSMUST00000101526 1706 ntAPPRIS ALT2 TSL 1 (best) BASIC19.28■□□□□ 0.68
P04945 Hmgn3-202ENSMUST00000162246 983 ntAPPRIS P4 TSL 1 (best) BASIC19.28■□□□□ 0.68
P04945 Trappc6b-203ENSMUST00000217863 797 ntTSL 2 BASIC19.28■□□□□ 0.68
P04945 Zcrb1-201ENSMUST00000076070 877 ntAPPRIS P3 TSL 1 (best) BASIC19.28■□□□□ 0.68
P04945 Terc-201ENSMUST00000082862 423 ntBASIC19.28■□□□□ 0.68
P04945 Acot3-202ENSMUST00000120927 1854 ntAPPRIS ALT2 TSL 1 (best) BASIC19.28■□□□□ 0.68
P04945 Manf-202ENSMUST00000159283 2247 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
P04945 Hoxb3-202ENSMUST00000093944 3190 ntAPPRIS P1 TSL 5 BASIC19.28■□□□□ 0.68
P04945 Hist2h3c1-201ENSMUST00000176059 1820 ntAPPRIS P1 BASIC19.28■□□□□ 0.68
P04945 Hist2h3c1-202ENSMUST00000177796 1825 ntBASIC19.28■□□□□ 0.68
P04945 Homer3-203ENSMUST00000110124 2445 ntAPPRIS ALT1 TSL 5 BASIC19.27■□□□□ 0.68
P04945 Syce2-202ENSMUST00000136026 1686 ntAPPRIS P3 TSL 1 (best) BASIC19.27■□□□□ 0.68
P04945 Fancf-201ENSMUST00000169357 1691 ntAPPRIS P1 BASIC19.27■□□□□ 0.68
P04945 Dapk2-201ENSMUST00000034944 1772 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
P04945 Drd4-201ENSMUST00000026569 2799 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
P04945 Trafd1-201ENSMUST00000042312 2503 ntAPPRIS P4 TSL 1 (best) BASIC19.27■□□□□ 0.68
P04945 Cbln1-202ENSMUST00000169693 1699 ntAPPRIS P1 TSL 5 BASIC19.27■□□□□ 0.67
P04945 St6galnac6-205ENSMUST00000113290 2402 ntAPPRIS ALT1 TSL 5 BASIC19.26■□□□□ 0.67
P04945 Tmem106c-201ENSMUST00000064200 1635 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
P04945 Kcnc3-203ENSMUST00000207493 2731 ntAPPRIS ALT2 TSL 5 BASIC19.26■□□□□ 0.67
P04945 Mta3-204ENSMUST00000112352 2674 ntAPPRIS ALT2 TSL 1 (best) BASIC19.26■□□□□ 0.67
P04945 Ltk-205ENSMUST00000140224 2240 ntAPPRIS ALT2 TSL 1 (best) BASIC19.25■□□□□ 0.67
P04945 Ltk-206ENSMUST00000182203 2232 ntAPPRIS ALT2 TSL 1 (best) BASIC19.25■□□□□ 0.67
P04945 Capza2-201ENSMUST00000015877 2537 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
P04945 Trim3-202ENSMUST00000106789 2841 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
P04945 Tmed2-201ENSMUST00000060226 2074 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
P04945 Hecw2-202ENSMUST00000097741 1132 ntTSL 1 (best) BASIC19.25■□□□□ 0.67
P04945 Opn3-201ENSMUST00000027809 1913 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
P04945 Ubl3-204ENSMUST00000201595 2064 ntAPPRIS P1 TSL 2 BASIC19.24■□□□□ 0.67
P04945 Gm17110-201ENSMUST00000171248 735 ntTSL 3 BASIC19.24■□□□□ 0.67
P04945 Foxo6-201ENSMUST00000102656 2615 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
P04945 Gm21989-201ENSMUST00000174530 1609 ntTSL 1 (best) BASIC19.24■□□□□ 0.67
P04945 Luc7l3-203ENSMUST00000107821 2050 ntAPPRIS P1 TSL 5 BASIC19.24■□□□□ 0.67
P04945 St7-207ENSMUST00000115418 1678 ntTSL 5 BASIC19.24■□□□□ 0.67
P04945 Adgrb1-202ENSMUST00000170845 2704 ntTSL 5 BASIC19.24■□□□□ 0.67
P04945 Tmem150a-202ENSMUST00000132243 1478 ntTSL 5 BASIC19.23■□□□□ 0.67
P04945 Dvl1-208ENSMUST00000168552 2776 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
Retrieved 100 of 76,532 protein–RNA pairs in 88.4 ms