Protein–RNA interactions for Protein: P02831

Hoxa3, Homeobox protein Hox-A3, mousemouse

Predictions only

Length 443 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Hoxa3P02831 Gipc1-201ENSMUST00000019577 1522 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
Hoxa3P02831 Kctd6-201ENSMUST00000022272 1650 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
Hoxa3P02831 Mypop-201ENSMUST00000059331 2173 ntAPPRIS P1 TSL 5 BASIC18.79■□□□□ 0.6
Hoxa3P02831 Gm45713-201ENSMUST00000209467 1477 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
Hoxa3P02831 Gm14523-201ENSMUST00000117260 558 ntBASIC18.79■□□□□ 0.6
Hoxa3P02831 Acvr2b-201ENSMUST00000035093 1729 ntTSL 5 BASIC18.79■□□□□ 0.6
Hoxa3P02831 Rmnd5a-201ENSMUST00000002292 6165 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
Hoxa3P02831 Gm13256-201ENSMUST00000131297 520 ntTSL 3 BASIC18.78■□□□□ 0.6
Hoxa3P02831 Ankrd49-205ENSMUST00000216037 1037 ntAPPRIS P1 TSL 2 BASIC18.78■□□□□ 0.6
Hoxa3P02831 Fads2-201ENSMUST00000025567 1508 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
Hoxa3P02831 Etfa-201ENSMUST00000034866 1392 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
Hoxa3P02831 Fzd9-201ENSMUST00000062572 2293 ntAPPRIS P1 BASIC18.77■□□□□ 0.6
Hoxa3P02831 Gm4419-202ENSMUST00000226239 1431 ntBASIC18.77■□□□□ 0.6
Hoxa3P02831 Frat2-201ENSMUST00000059231 2161 ntAPPRIS P1 BASIC18.77■□□□□ 0.6
Hoxa3P02831 Zfp703-201ENSMUST00000127097 587 ntTSL 2 BASIC18.77■□□□□ 0.6
Hoxa3P02831 Ppp2r3d-202ENSMUST00000180270 450 ntTSL 1 (best) BASIC18.77■□□□□ 0.6
Hoxa3P02831 Pdlim4-201ENSMUST00000018755 1182 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
Hoxa3P02831 H2afy-202ENSMUST00000045788 1933 ntTSL 1 (best) BASIC18.76■□□□□ 0.59
Hoxa3P02831 Cdkn2c-202ENSMUST00000097921 2471 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
Hoxa3P02831 Gm7332-201ENSMUST00000118351 454 ntBASIC18.76■□□□□ 0.59
Hoxa3P02831 Gm39157-201ENSMUST00000212322 1180 ntTSL 5 BASIC18.76■□□□□ 0.59
Hoxa3P02831 Sox3-201ENSMUST00000135107 2065 ntAPPRIS P1 BASIC18.76■□□□□ 0.59
Hoxa3P02831 Gm16286-202ENSMUST00000125127 1683 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
Hoxa3P02831 Rnf115-201ENSMUST00000029740 2209 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
Hoxa3P02831 Rnaset2a-201ENSMUST00000097420 1259 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
Hoxa3P02831 Inafm1-201ENSMUST00000169612 1605 ntAPPRIS P1 BASIC18.74■□□□□ 0.59
Hoxa3P02831 Cpe-201ENSMUST00000048967 2117 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
Hoxa3P02831 Hoxb3-201ENSMUST00000055334 1890 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
Hoxa3P02831 Mrpl23-201ENSMUST00000038675 692 ntAPPRIS P2 TSL 1 (best) BASIC18.74■□□□□ 0.59
Hoxa3P02831 Phlpp1-201ENSMUST00000061047 6226 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
Hoxa3P02831 Tnfsfm13-203ENSMUST00000180587 2235 ntAPPRIS P3 TSL 2 BASIC18.74■□□□□ 0.59
Hoxa3P02831 Ethe1-201ENSMUST00000077191 1484 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
Hoxa3P02831 Qdpr-201ENSMUST00000015950 1380 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
Hoxa3P02831 Gm26711-201ENSMUST00000180866 1833 ntTSL 1 (best) BASIC18.73■□□□□ 0.59
Hoxa3P02831 Kiss1-201ENSMUST00000007433 779 ntAPPRIS P1 TSL 2 BASIC18.73■□□□□ 0.59
Hoxa3P02831 5031425E22Rik-201ENSMUST00000101522 2110 ntBASIC18.73■□□□□ 0.59
Hoxa3P02831 Ipmk-202ENSMUST00000118381 1323 ntTSL 1 (best) BASIC18.73■□□□□ 0.59
Hoxa3P02831 Srsf2-206ENSMUST00000190993 1326 ntAPPRIS P1 TSL 2 BASIC18.73■□□□□ 0.59
Hoxa3P02831 St3gal2-202ENSMUST00000117534 2177 ntTSL 1 (best) BASIC18.72■□□□□ 0.59
Hoxa3P02831 Slc30a2-203ENSMUST00000105873 1224 ntTSL 5 BASIC18.72■□□□□ 0.59
Hoxa3P02831 Tmem240-202ENSMUST00000147721 817 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
Hoxa3P02831 Kiss1-202ENSMUST00000178033 496 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
Hoxa3P02831 Ube2k-203ENSMUST00000201266 1449 ntTSL 5 BASIC18.72■□□□□ 0.59
Hoxa3P02831 Cdr2-201ENSMUST00000033169 2525 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
Hoxa3P02831 Gm27040-201ENSMUST00000181984 504 ntTSL 2 BASIC18.71■□□□□ 0.59
Hoxa3P02831 Rab4b-201ENSMUST00000093040 1192 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
Hoxa3P02831 Trnau1ap-203ENSMUST00000105962 961 ntTSL 5 BASIC18.7■□□□□ 0.58
Hoxa3P02831 Gm13594-201ENSMUST00000137582 476 ntTSL 1 (best) BASIC18.7■□□□□ 0.58
Hoxa3P02831 Phf2-201ENSMUST00000035540 5494 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
Hoxa3P02831 Paqr3-202ENSMUST00000112968 1875 ntTSL 1 (best) BASIC18.69■□□□□ 0.58
Hoxa3P02831 Fam149b-203ENSMUST00000090499 2370 ntAPPRIS P4 TSL 1 (best) BASIC18.69■□□□□ 0.58
Hoxa3P02831 Kras-201ENSMUST00000032399 4678 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
Hoxa3P02831 Cbr3-201ENSMUST00000039620 1170 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
Hoxa3P02831 Syndig1l-201ENSMUST00000095550 2524 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
Hoxa3P02831 Rpl35-201ENSMUST00000080861 946 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
Hoxa3P02831 Kctd2-201ENSMUST00000103035 1764 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
Hoxa3P02831 Gdf7-202ENSMUST00000220073 1399 ntAPPRIS ALT2 TSL 1 (best) BASIC18.68■□□□□ 0.58
Hoxa3P02831 Vegfa-211ENSMUST00000167860 975 ntTSL 1 (best) BASIC18.67■□□□□ 0.58
Hoxa3P02831 Hnrnpk-210ENSMUST00000176558 1053 ntTSL 2 BASIC18.67■□□□□ 0.58
Hoxa3P02831 Vegfa-212ENSMUST00000214739 1107 ntAPPRIS ALT2 TSL 1 (best) BASIC18.67■□□□□ 0.58
Hoxa3P02831 Vegfa-213ENSMUST00000217017 1179 ntAPPRIS P4 TSL 1 (best) BASIC18.67■□□□□ 0.58
Hoxa3P02831 Ube2j2-202ENSMUST00000103175 1309 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
Hoxa3P02831 Cadm1-209ENSMUST00000152459 1784 ntTSL 1 (best) BASIC18.66■□□□□ 0.58
Hoxa3P02831 Upf3a-201ENSMUST00000043767 2057 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
Hoxa3P02831 Slc35a2-211ENSMUST00000208640 486 ntTSL 5 BASIC18.66■□□□□ 0.58
Hoxa3P02831 Tmem170b-202ENSMUST00000221694 602 ntTSL 3 BASIC18.66■□□□□ 0.58
Hoxa3P02831 Fam220a-201ENSMUST00000067145 2198 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
Hoxa3P02831 Nudc-201ENSMUST00000030665 1316 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
Hoxa3P02831 AC122428.3-201ENSMUST00000215551 2290 ntBASIC18.66■□□□□ 0.58
Hoxa3P02831 Ccna1-202ENSMUST00000197238 1719 ntAPPRIS P1 TSL 5 BASIC18.66■□□□□ 0.58
Hoxa3P02831 Hoxd9-201ENSMUST00000059272 2136 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
Hoxa3P02831 Dnpep-201ENSMUST00000066668 2488 ntAPPRIS P3 TSL 1 (best) BASIC18.65■□□□□ 0.58
Hoxa3P02831 Vmac-201ENSMUST00000067931 2174 ntAPPRIS P3 TSL 1 (best) BASIC18.65■□□□□ 0.58
Hoxa3P02831 Foxn3-209ENSMUST00000177451 2882 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
Hoxa3P02831 Tmpo-203ENSMUST00000092219 1854 ntTSL 1 (best) BASIC18.65■□□□□ 0.58
Hoxa3P02831 A030014E15Rik-201ENSMUST00000223400 796 ntAPPRIS P1 BASIC18.65■□□□□ 0.58
Hoxa3P02831 Ddrgk1-201ENSMUST00000089559 1238 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
Hoxa3P02831 Hecw2-202ENSMUST00000097741 1132 ntTSL 1 (best) BASIC18.65■□□□□ 0.58
Hoxa3P02831 Gm21989-201ENSMUST00000174530 1609 ntTSL 1 (best) BASIC18.64■□□□□ 0.57
Hoxa3P02831 Glrx3-201ENSMUST00000064404 1685 ntAPPRIS P2 TSL 1 (best) BASIC18.64■□□□□ 0.57
Hoxa3P02831 Pura-201ENSMUST00000051301 3145 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
Hoxa3P02831 Cys1-207ENSMUST00000186602 1757 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
Hoxa3P02831 Mbd3-203ENSMUST00000105348 1222 ntTSL 5 BASIC18.64■□□□□ 0.57
Hoxa3P02831 Oaz2-206ENSMUST00000153700 1843 ntAPPRIS P2 TSL 5 BASIC18.64■□□□□ 0.57
Hoxa3P02831 Gng12-204ENSMUST00000114225 1876 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
Hoxa3P02831 Kcnc3-206ENSMUST00000208651 2728 ntAPPRIS ALT2 TSL 5 BASIC18.64■□□□□ 0.57
Hoxa3P02831 Cadps-204ENSMUST00000177814 5461 ntAPPRIS ALT2 TSL 5 BASIC18.63■□□□□ 0.57
Hoxa3P02831 Cdc42bpb-201ENSMUST00000041965 6714 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
Hoxa3P02831 Ctdspl-201ENSMUST00000073109 4589 ntAPPRIS P2 TSL 1 (best) BASIC18.63■□□□□ 0.57
Hoxa3P02831 Slc39a13-203ENSMUST00000111436 1291 ntTSL 1 (best) BASIC18.63■□□□□ 0.57
Hoxa3P02831 Gm20109-201ENSMUST00000180802 671 ntTSL 1 (best) BASIC18.63■□□□□ 0.57
Hoxa3P02831 Fam149b-201ENSMUST00000037698 924 ntTSL 1 (best) BASIC18.63■□□□□ 0.57
Hoxa3P02831 Ppp1ca-201ENSMUST00000046094 1379 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
Hoxa3P02831 Cadm1-206ENSMUST00000143026 1643 ntTSL 5 BASIC18.63■□□□□ 0.57
Hoxa3P02831 Rbm45-201ENSMUST00000046389 1898 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
Hoxa3P02831 Cited2-201ENSMUST00000038107 1979 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
Hoxa3P02831 Ildr2-202ENSMUST00000192426 1238 ntTSL 1 (best) BASIC18.62■□□□□ 0.57
Hoxa3P02831 Gm7276-201ENSMUST00000097520 1252 ntAPPRIS P1 BASIC18.62■□□□□ 0.57
Hoxa3P02831 Rab4a-202ENSMUST00000118535 1419 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
Hoxa3P02831 Smarcc1-201ENSMUST00000088716 5717 ntAPPRIS P2 TSL 1 (best) BASIC18.62■□□□□ 0.57
Retrieved 100 of 76,532 protein–RNA pairs in 48.5 ms