Protein–RNA interactions for Protein: O88895

Hdac3, Histone deacetylase 3, mousemouse

Predictions only

Length 424 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Hdac3O88895 Gm28513-201ENSMUST00000191474 613 ntTSL 3 BASIC19.94■□□□□ 0.78
Hdac3O88895 Spats2-201ENSMUST00000063517 3065 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
Hdac3O88895 Stradb-202ENSMUST00000114296 1348 ntTSL 1 (best) BASIC19.94■□□□□ 0.78
Hdac3O88895 Tmem98-201ENSMUST00000040865 1633 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
Hdac3O88895 Atxn7l2-201ENSMUST00000102633 3044 ntAPPRIS P2 TSL 1 (best) BASIC19.94■□□□□ 0.78
Hdac3O88895 Ctage5-203ENSMUST00000170992 2785 ntTSL 1 (best) BASIC19.94■□□□□ 0.78
Hdac3O88895 Ube2e3-201ENSMUST00000028398 2249 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
Hdac3O88895 Traf3ip1-203ENSMUST00000189341 2257 ntAPPRIS ALT2 TSL 5 BASIC19.93■□□□□ 0.78
Hdac3O88895 Fam126a-206ENSMUST00000197617 2288 ntTSL 5 BASIC19.93■□□□□ 0.78
Hdac3O88895 Kcnq5-201ENSMUST00000029667 6562 ntAPPRIS P3 TSL 1 (best) BASIC19.93■□□□□ 0.78
Hdac3O88895 Ube2g2-204ENSMUST00000174510 2031 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
Hdac3O88895 Hdac3-201ENSMUST00000043498 2004 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
Hdac3O88895 Msl1-203ENSMUST00000107485 2091 ntTSL 1 (best) BASIC19.93■□□□□ 0.78
Hdac3O88895 Eml4-202ENSMUST00000096766 5445 ntAPPRIS ALT2 TSL 1 (best) BASIC19.93■□□□□ 0.78
Hdac3O88895 Usp21-203ENSMUST00000111306 2185 ntAPPRIS ALT1 TSL 1 (best) BASIC19.93■□□□□ 0.78
Hdac3O88895 Trim33-201ENSMUST00000029444 8875 ntAPPRIS P4 TSL 1 (best) BASIC19.93■□□□□ 0.78
Hdac3O88895 Luc7l3-203ENSMUST00000107821 2050 ntAPPRIS P1 TSL 5 BASIC19.93■□□□□ 0.78
Hdac3O88895 Arpc2-203ENSMUST00000113820 1439 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
Hdac3O88895 St6galnac6-205ENSMUST00000113290 2402 ntAPPRIS ALT1 TSL 5 BASIC19.92■□□□□ 0.78
Hdac3O88895 Suds3-201ENSMUST00000086471 2425 ntAPPRIS P3 TSL 1 (best) BASIC19.92■□□□□ 0.78
Hdac3O88895 Gm26917-201ENSMUST00000182520 869 ntTSL 5 BASIC19.92■□□□□ 0.78
Hdac3O88895 6330420H09Rik-201ENSMUST00000211371 1316 ntTSL 1 (best) BASIC19.92■□□□□ 0.78
Hdac3O88895 Impdh1-201ENSMUST00000078155 2437 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
Hdac3O88895 Ube2q1-201ENSMUST00000038356 3077 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
Hdac3O88895 B230322F03Rik-201ENSMUST00000181932 1569 ntBASIC19.91■□□□□ 0.78
Hdac3O88895 Gmeb1-202ENSMUST00000105964 1925 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
Hdac3O88895 Ildr2-203ENSMUST00000192638 2587 ntAPPRIS ALT2 TSL 1 (best) BASIC19.91■□□□□ 0.78
Hdac3O88895 Lsr-201ENSMUST00000001279 2167 ntAPPRIS P3 TSL 1 (best) BASIC19.91■□□□□ 0.78
Hdac3O88895 Gipc1-201ENSMUST00000019577 1522 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
Hdac3O88895 Foxo6-201ENSMUST00000102656 2615 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
Hdac3O88895 Nek6-202ENSMUST00000112895 1513 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
Hdac3O88895 Cdc42bpb-201ENSMUST00000041965 6714 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
Hdac3O88895 Kcnc3-201ENSMUST00000107906 5062 ntAPPRIS ALT2 TSL 1 (best) BASIC19.9■□□□□ 0.78
Hdac3O88895 Arl8a-201ENSMUST00000027684 1713 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
Hdac3O88895 Purg-202ENSMUST00000078058 1795 ntTSL 1 (best) BASIC19.9■□□□□ 0.78
Hdac3O88895 Dact1-202ENSMUST00000150639 2448 ntAPPRIS P1 TSL 3 BASIC19.9■□□□□ 0.78
Hdac3O88895 Msl2-202ENSMUST00000189616 2612 ntTSL 5 BASIC19.89■□□□□ 0.78
Hdac3O88895 Phf14-203ENSMUST00000115511 3336 ntAPPRIS P1 TSL 5 BASIC19.89■□□□□ 0.77
Hdac3O88895 AW121686-201ENSMUST00000181049 2200 ntTSL 1 (best) BASIC19.89■□□□□ 0.77
Hdac3O88895 Map2k7-201ENSMUST00000003027 1626 ntTSL 1 (best) BASIC19.89■□□□□ 0.77
Hdac3O88895 Hccs-201ENSMUST00000033717 2320 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.77
Hdac3O88895 Phf23-201ENSMUST00000018716 2006 ntAPPRIS P3 TSL 1 (best) BASIC19.88■□□□□ 0.77
Hdac3O88895 Pdcd4-203ENSMUST00000165617 1806 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
Hdac3O88895 Nkx2-4-201ENSMUST00000067020 1725 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
Hdac3O88895 Dennd5a-201ENSMUST00000080437 5004 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
Hdac3O88895 Atp5j-201ENSMUST00000023608 809 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
Hdac3O88895 Ltk-205ENSMUST00000140224 2240 ntAPPRIS ALT2 TSL 1 (best) BASIC19.88■□□□□ 0.77
Hdac3O88895 Ltk-206ENSMUST00000182203 2232 ntAPPRIS ALT2 TSL 1 (best) BASIC19.88■□□□□ 0.77
Hdac3O88895 Drd4-201ENSMUST00000026569 2799 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
Hdac3O88895 Pcbd2-201ENSMUST00000021958 544 ntTSL 1 (best) BASIC19.87■□□□□ 0.77
Hdac3O88895 Nsun2-208ENSMUST00000176485 2408 ntAPPRIS ALT2 TSL 5 BASIC19.87■□□□□ 0.77
Hdac3O88895 Ttc9-201ENSMUST00000036116 2042 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
Hdac3O88895 Arhgef26-201ENSMUST00000079300 5638 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
Hdac3O88895 Pde6d-201ENSMUST00000027444 1159 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
Hdac3O88895 Gm4799-201ENSMUST00000095396 657 ntBASIC19.86■□□□□ 0.77
Hdac3O88895 Nt5c3-201ENSMUST00000031793 1676 ntAPPRIS P3 TSL 1 (best) BASIC19.86■□□□□ 0.77
Hdac3O88895 Mxra7-201ENSMUST00000021170 2063 ntAPPRIS P3 TSL 1 (best) BASIC19.86■□□□□ 0.77
Hdac3O88895 Tmem70-203ENSMUST00000177501 1636 ntAPPRIS P3 TSL 1 (best) BASIC19.86■□□□□ 0.77
Hdac3O88895 Mppe1-201ENSMUST00000073054 2007 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
Hdac3O88895 Hgh1-201ENSMUST00000023213 1959 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
Hdac3O88895 Nnat-208ENSMUST00000173595 927 ntTSL 2 BASIC19.85■□□□□ 0.77
Hdac3O88895 Zfp768-202ENSMUST00000205266 2513 ntAPPRIS ALT2 TSL 5 BASIC19.85■□□□□ 0.77
Hdac3O88895 Ski-201ENSMUST00000030917 5522 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
Hdac3O88895 Kif1c-205ENSMUST00000152618 1943 ntTSL 1 (best) BASIC19.84■□□□□ 0.77
Hdac3O88895 Gm13889-201ENSMUST00000099689 1386 ntBASIC19.84■□□□□ 0.77
Hdac3O88895 Dvl1-208ENSMUST00000168552 2776 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
Hdac3O88895 Fam149b-203ENSMUST00000090499 2370 ntAPPRIS P4 TSL 1 (best) BASIC19.84■□□□□ 0.77
Hdac3O88895 Ing1-201ENSMUST00000054399 2814 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.77
Hdac3O88895 Hoxb9-201ENSMUST00000000010 2574 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.77
Hdac3O88895 Kcnk12-201ENSMUST00000055221 1936 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.77
Hdac3O88895 D16Ertd472e-201ENSMUST00000114218 1271 ntAPPRIS P1 TSL 5 BASIC19.83■□□□□ 0.77
Hdac3O88895 Gm40983-202ENSMUST00000222598 1198 ntTSL 5 BASIC19.83■□□□□ 0.77
Hdac3O88895 Man1a-201ENSMUST00000003843 5137 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.76
Hdac3O88895 Ccnyl1-203ENSMUST00000187170 1506 ntAPPRIS P1 TSL 5 BASIC19.82■□□□□ 0.76
Hdac3O88895 Slc17a7-201ENSMUST00000085374 2915 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
Hdac3O88895 1700003F12Rik-202ENSMUST00000109709 704 ntAPPRIS ALT2 TSL 3 BASIC19.82■□□□□ 0.76
Hdac3O88895 Fus-204ENSMUST00000121616 1102 ntTSL 1 (best) BASIC19.82■□□□□ 0.76
Hdac3O88895 Krtap28-13-201ENSMUST00000188005 992 ntAPPRIS P1 BASIC19.82■□□□□ 0.76
Hdac3O88895 1700003F12Rik-201ENSMUST00000045116 704 ntAPPRIS P2 TSL 1 (best) BASIC19.82■□□□□ 0.76
Hdac3O88895 Rhou-201ENSMUST00000045487 3371 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
Hdac3O88895 Plpp2-204ENSMUST00000166804 1566 ntAPPRIS ALT2 TSL 1 (best) BASIC19.82■□□□□ 0.76
Hdac3O88895 Prph-202ENSMUST00000047104 1865 ntAPPRIS P3 TSL 1 (best) BASIC19.82■□□□□ 0.76
Hdac3O88895 Coro1b-201ENSMUST00000008893 1888 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
Hdac3O88895 Klc1-201ENSMUST00000084941 2504 ntAPPRIS P3 TSL 1 (best) BASIC19.81■□□□□ 0.76
Hdac3O88895 A330041J22Rik-201ENSMUST00000150367 1825 ntTSL 1 (best) BASIC19.81■□□□□ 0.76
Hdac3O88895 Ltk-201ENSMUST00000028759 3080 ntAPPRIS P4 TSL 1 (best) BASIC19.81■□□□□ 0.76
Hdac3O88895 Hmgn3-202ENSMUST00000162246 983 ntAPPRIS P4 TSL 1 (best) BASIC19.81■□□□□ 0.76
Hdac3O88895 A930035D04Rik-201ENSMUST00000064013 543 ntBASIC19.81■□□□□ 0.76
Hdac3O88895 Mid2-201ENSMUST00000112988 2525 ntTSL 5 BASIC19.81■□□□□ 0.76
Hdac3O88895 Whrn-202ENSMUST00000063672 2804 ntTSL 1 (best) BASIC19.8■□□□□ 0.76
Hdac3O88895 Lor-201ENSMUST00000058150 1779 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
Hdac3O88895 Izumo4-205ENSMUST00000218184 1196 ntAPPRIS P1 TSL 2 BASIC19.8■□□□□ 0.76
Hdac3O88895 Rab43-202ENSMUST00000032135 1262 ntTSL 1 (best) BASIC19.8■□□□□ 0.76
Hdac3O88895 Tceal3-201ENSMUST00000060904 1116 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
Hdac3O88895 Spsb3-202ENSMUST00000068508 2004 ntTSL 1 (best) BASIC19.8■□□□□ 0.76
Hdac3O88895 Emc10-202ENSMUST00000118808 1872 ntAPPRIS P2 TSL 1 (best) BASIC19.79■□□□□ 0.76
Hdac3O88895 Sec22c-202ENSMUST00000111560 2669 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
Hdac3O88895 Gm42699-201ENSMUST00000198104 1657 ntBASIC19.79■□□□□ 0.76
Hdac3O88895 Dbndd2-202ENSMUST00000069385 1658 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
Hdac3O88895 2700081O15Rik-202ENSMUST00000159348 4989 ntAPPRIS P1 TSL 5 BASIC19.79■□□□□ 0.76
Retrieved 100 of 76,532 protein–RNA pairs in 41.4 ms