Protein–RNA interactions for Protein: O55242

Sigmar1, Sigma non-opioid intracellular receptor 1, mousemouse

Predictions only

Length 223 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sigmar1O55242 Nrsn1-201ENSMUST00000057866 2222 ntAPPRIS P1 TSL 1 (best) BASIC15.49■□□□□ 0.07
Sigmar1O55242 Mtf2-202ENSMUST00000112626 1968 ntTSL 5 BASIC15.49■□□□□ 0.07
Sigmar1O55242 Srcap-211ENSMUST00000189136 1960 ntTSL 1 (best) BASIC15.49■□□□□ 0.07
Sigmar1O55242 Hsf1-207ENSMUST00000228371 2102 ntBASIC15.49■□□□□ 0.07
Sigmar1O55242 Slc35d3-201ENSMUST00000059805 2630 ntAPPRIS P1 TSL 1 (best) BASIC15.49■□□□□ 0.07
Sigmar1O55242 Stard10-202ENSMUST00000163799 1723 ntTSL 1 (best) BASIC15.48■□□□□ 0.07
Sigmar1O55242 Tspan33-201ENSMUST00000046750 1994 ntAPPRIS P3 TSL 1 (best) BASIC15.48■□□□□ 0.07
Sigmar1O55242 Gm43006-201ENSMUST00000197702 1602 ntBASIC15.48■□□□□ 0.07
Sigmar1O55242 Hoxd13-201ENSMUST00000001872 2483 ntAPPRIS P1 TSL 1 (best) BASIC15.48■□□□□ 0.07
Sigmar1O55242 Banp-202ENSMUST00000093078 2289 ntTSL 1 (best) BASIC15.48■□□□□ 0.07
Sigmar1O55242 Fam20b-202ENSMUST00000122424 4532 ntAPPRIS P1 TSL 5 BASIC15.47■□□□□ 0.07
Sigmar1O55242 Stau2-210ENSMUST00000149320 2214 ntTSL 5 BASIC15.47■□□□□ 0.07
Sigmar1O55242 Pabpn1-201ENSMUST00000022808 1030 ntAPPRIS P2 TSL 1 (best) BASIC15.47■□□□□ 0.07
Sigmar1O55242 Magi2-205ENSMUST00000197354 4785 ntAPPRIS ALT2 TSL 5 BASIC15.47■□□□□ 0.07
Sigmar1O55242 Susd6-203ENSMUST00000220238 2127 ntAPPRIS ALT2 TSL 1 (best) BASIC15.47■□□□□ 0.07
Sigmar1O55242 Zbtb10-201ENSMUST00000155203 7414 ntAPPRIS P1 TSL 5 BASIC15.47■□□□□ 0.07
Sigmar1O55242 Amdhd1-201ENSMUST00000016034 2421 ntAPPRIS P1 TSL 1 (best) BASIC15.46■□□□□ 0.07
Sigmar1O55242 Sel1l3-201ENSMUST00000031090 4512 ntAPPRIS P1 TSL 1 (best) BASIC15.46■□□□□ 0.07
Sigmar1O55242 Syce2-204ENSMUST00000170296 929 ntAPPRIS ALT2 TSL 2 BASIC15.46■□□□□ 0.07
Sigmar1O55242 Gm30346-201ENSMUST00000218641 1699 ntBASIC15.46■□□□□ 0.07
Sigmar1O55242 Hnrnpd-202ENSMUST00000072750 1537 ntAPPRIS ALT2 TSL 3 BASIC15.46■□□□□ 0.07
Sigmar1O55242 Dbf4-207ENSMUST00000171808 2402 ntAPPRIS P3 TSL 1 (best) BASIC15.46■□□□□ 0.07
Sigmar1O55242 Glrx5-201ENSMUST00000021522 2925 ntAPPRIS P1 TSL 1 (best) BASIC15.46■□□□□ 0.06
Sigmar1O55242 Dyrk1b-202ENSMUST00000172467 2523 ntTSL 1 (best) BASIC15.46■□□□□ 0.06
Sigmar1O55242 Acsl3-203ENSMUST00000134566 2492 ntTSL 1 (best) BASIC15.45■□□□□ 0.06
Sigmar1O55242 Zgpat-202ENSMUST00000108807 2072 ntAPPRIS P1 TSL 1 (best) BASIC15.45■□□□□ 0.06
Sigmar1O55242 Gm26766-202ENSMUST00000227544 2347 ntBASIC15.45■□□□□ 0.06
Sigmar1O55242 Lmo2-201ENSMUST00000111139 1434 ntTSL 5 BASIC15.45■□□□□ 0.06
Sigmar1O55242 Actr3b-202ENSMUST00000128727 2031 ntTSL 1 (best) BASIC15.45■□□□□ 0.06
Sigmar1O55242 Nhlh1-201ENSMUST00000059794 2464 ntAPPRIS P1 TSL 1 (best) BASIC15.45■□□□□ 0.06
Sigmar1O55242 Jag1-201ENSMUST00000028735 5612 ntAPPRIS P1 TSL 1 (best) BASIC15.45■□□□□ 0.06
Sigmar1O55242 Mindy2-202ENSMUST00000213380 2521 ntAPPRIS ALT2 TSL 1 (best) BASIC15.45■□□□□ 0.06
Sigmar1O55242 Dhrs13-203ENSMUST00000122342 1791 ntTSL 1 (best) BASIC15.44■□□□□ 0.06
Sigmar1O55242 Shisa7-203ENSMUST00000119433 3481 ntAPPRIS P2 TSL 1 (best) BASIC15.44■□□□□ 0.06
Sigmar1O55242 Slc25a33-201ENSMUST00000105686 1887 ntAPPRIS P1 TSL 1 (best) BASIC15.44■□□□□ 0.06
Sigmar1O55242 Lrrc14-201ENSMUST00000036423 2093 ntAPPRIS P1 TSL 1 (best) BASIC15.44■□□□□ 0.06
Sigmar1O55242 Gm15043-201ENSMUST00000118843 1543 ntBASIC15.43■□□□□ 0.06
Sigmar1O55242 Rora-202ENSMUST00000113624 2591 ntAPPRIS P1 TSL 1 (best) BASIC15.43■□□□□ 0.06
Sigmar1O55242 Gm26711-201ENSMUST00000180866 1833 ntTSL 1 (best) BASIC15.43■□□□□ 0.06
Sigmar1O55242 Dmrta2-201ENSMUST00000061187 2922 ntAPPRIS P1 TSL 1 (best) BASIC15.43■□□□□ 0.06
Sigmar1O55242 Shox2-201ENSMUST00000029422 3079 ntAPPRIS P1 TSL 1 (best) BASIC15.43■□□□□ 0.06
Sigmar1O55242 Tmtc1-201ENSMUST00000060095 8383 ntAPPRIS P1 TSL 1 (best) BASIC15.43■□□□□ 0.06
Sigmar1O55242 Bean1-202ENSMUST00000164076 2423 ntAPPRIS ALT2 TSL 1 (best) BASIC15.43■□□□□ 0.06
Sigmar1O55242 Ssbp4-205ENSMUST00000210369 1828 ntTSL 2 BASIC15.43■□□□□ 0.06
Sigmar1O55242 Gkap1-201ENSMUST00000091579 1523 ntAPPRIS P1 TSL 1 (best) BASIC15.43■□□□□ 0.06
Sigmar1O55242 E4f1-201ENSMUST00000056032 2574 ntAPPRIS P2 TSL 1 (best) BASIC15.42■□□□□ 0.06
Sigmar1O55242 Hsd17b11-201ENSMUST00000031251 1825 ntAPPRIS P1 TSL 1 (best) BASIC15.42■□□□□ 0.06
Sigmar1O55242 Akt1s1-202ENSMUST00000107880 1757 ntAPPRIS P3 TSL 1 (best) BASIC15.41■□□□□ 0.06
Sigmar1O55242 Ilk-201ENSMUST00000033182 1795 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
Sigmar1O55242 Abhd17a-201ENSMUST00000003436 1468 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
Sigmar1O55242 AC164550.2-201ENSMUST00000219127 2086 ntTSL 5 BASIC15.41■□□□□ 0.06
Sigmar1O55242 Fam122a-201ENSMUST00000099556 855 ntAPPRIS P1 BASIC15.41■□□□□ 0.06
Sigmar1O55242 Fam136a-201ENSMUST00000071492 1643 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
Sigmar1O55242 Glipr2-201ENSMUST00000030202 2320 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
Sigmar1O55242 Tmtc1-202ENSMUST00000100772 8269 ntTSL 2 BASIC15.41■□□□□ 0.06
Sigmar1O55242 Rfx5-204ENSMUST00000107255 2350 ntAPPRIS P1 TSL 5 BASIC15.41■□□□□ 0.06
Sigmar1O55242 Gga2-201ENSMUST00000033160 4915 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
Sigmar1O55242 Mvb12b-201ENSMUST00000041555 4998 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
Sigmar1O55242 Arid1b-201ENSMUST00000092723 7150 ntAPPRIS ALT2 TSL 5 BASIC15.4■□□□□ 0.06
Sigmar1O55242 Tram1-201ENSMUST00000027068 2938 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
Sigmar1O55242 Celf6-203ENSMUST00000118549 2973 ntAPPRIS ALT2 TSL 5 BASIC15.4■□□□□ 0.06
Sigmar1O55242 Atp10a-201ENSMUST00000168747 5419 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
Sigmar1O55242 Vdac1-202ENSMUST00000102758 2022 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
Sigmar1O55242 Crk-204ENSMUST00000108426 671 ntTSL 3 BASIC15.4■□□□□ 0.06
Sigmar1O55242 Glrx5-203ENSMUST00000223244 793 ntTSL 5 BASIC15.4■□□□□ 0.06
Sigmar1O55242 Dpf1-201ENSMUST00000049977 2309 ntAPPRIS P2 TSL 1 (best) BASIC15.4■□□□□ 0.06
Sigmar1O55242 Znrf1-204ENSMUST00000171182 5466 ntTSL 3 BASIC15.4■□□□□ 0.06
Sigmar1O55242 Mapk14-205ENSMUST00000114758 1581 ntTSL 1 (best) BASIC15.4■□□□□ 0.06
Sigmar1O55242 5031439G07Rik-201ENSMUST00000047144 6845 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
Sigmar1O55242 Suds3-201ENSMUST00000086471 2425 ntAPPRIS P3 TSL 1 (best) BASIC15.39■□□□□ 0.05
Sigmar1O55242 Frat1-201ENSMUST00000087155 2614 ntAPPRIS P1 BASIC15.39■□□□□ 0.05
Sigmar1O55242 Tbc1d25-203ENSMUST00000143984 2184 ntAPPRIS ALT2 TSL 5 BASIC15.39■□□□□ 0.05
Sigmar1O55242 Pou2f2-205ENSMUST00000108417 1937 ntTSL 1 (best) BASIC15.39■□□□□ 0.05
Sigmar1O55242 Nab1-201ENSMUST00000069792 3874 ntAPPRIS P2 TSL 1 (best) BASIC15.39■□□□□ 0.05
Sigmar1O55242 Xylt1-201ENSMUST00000032892 9020 ntAPPRIS P1 TSL 1 (best) BASIC15.38■□□□□ 0.05
Sigmar1O55242 Arid1a-202ENSMUST00000105897 8175 ntAPPRIS P2 TSL 5 BASIC15.38■□□□□ 0.05
Sigmar1O55242 Gm26617-201ENSMUST00000180381 4429 ntTSL 3 BASIC15.38■□□□□ 0.05
Sigmar1O55242 Prdm13-202ENSMUST00000095141 3173 ntAPPRIS P2 TSL 2 BASIC15.38■□□□□ 0.05
Sigmar1O55242 Cenpv-201ENSMUST00000018653 1032 ntAPPRIS P1 TSL 1 (best) BASIC15.38■□□□□ 0.05
Sigmar1O55242 Six3-203ENSMUST00000176081 3680 ntAPPRIS P2 TSL 1 (best) BASIC15.38■□□□□ 0.05
Sigmar1O55242 Hlx-201ENSMUST00000048572 2278 ntAPPRIS P1 TSL 1 (best) BASIC15.38■□□□□ 0.05
Sigmar1O55242 Map3k21-201ENSMUST00000034316 5693 ntAPPRIS P1 TSL 1 (best) BASIC15.38■□□□□ 0.05
Sigmar1O55242 Chadl-201ENSMUST00000072910 2548 ntAPPRIS P1 TSL 5 BASIC15.38■□□□□ 0.05
Sigmar1O55242 Snx5-201ENSMUST00000028909 2419 ntAPPRIS P1 TSL 1 (best) BASIC15.37■□□□□ 0.05
Sigmar1O55242 Siglecf-206ENSMUST00000206299 2149 ntAPPRIS ALT2 TSL 1 (best) BASIC15.37■□□□□ 0.05
Sigmar1O55242 Pptc7-201ENSMUST00000053426 4644 ntAPPRIS P2 TSL 1 (best) BASIC15.37■□□□□ 0.05
Sigmar1O55242 Baz1a-201ENSMUST00000038926 6188 ntAPPRIS ALT2 TSL 5 BASIC15.37■□□□□ 0.05
Sigmar1O55242 Magi3-202ENSMUST00000121198 5912 ntAPPRIS ALT2 TSL 5 BASIC15.37■□□□□ 0.05
Sigmar1O55242 Pxdc1-202ENSMUST00000053459 2684 ntAPPRIS P1 TSL 1 (best) BASIC15.37■□□□□ 0.05
Sigmar1O55242 Rhbdl1-201ENSMUST00000026831 1711 ntAPPRIS P1 TSL 1 (best) BASIC15.37■□□□□ 0.05
Sigmar1O55242 D030046N08Rik-201ENSMUST00000162318 1570 ntTSL 1 (best) BASIC15.36■□□□□ 0.05
Sigmar1O55242 Chsy1-201ENSMUST00000036372 4176 ntAPPRIS P1 TSL 1 (best) BASIC15.36■□□□□ 0.05
Sigmar1O55242 Fam20b-201ENSMUST00000086153 4414 ntAPPRIS P1 TSL 1 (best) BASIC15.36■□□□□ 0.05
Sigmar1O55242 Cnot6-201ENSMUST00000020624 2498 ntTSL 1 (best) BASIC15.36■□□□□ 0.05
Sigmar1O55242 Pcgf5-210ENSMUST00000225411 1626 ntAPPRIS P5 BASIC15.35■□□□□ 0.05
Sigmar1O55242 Lrp8-204ENSMUST00000106733 3332 ntAPPRIS ALT2 TSL 5 BASIC15.35■□□□□ 0.05
Sigmar1O55242 Rab43-203ENSMUST00000078647 4605 ntAPPRIS P1 TSL 1 (best) BASIC15.35■□□□□ 0.05
Sigmar1O55242 Ssx2ip-203ENSMUST00000106151 3232 ntAPPRIS ALT2 TSL 1 (best) BASIC15.35■□□□□ 0.05
Sigmar1O55242 Gm9817-201ENSMUST00000054395 2531 ntAPPRIS P1 BASIC15.35■□□□□ 0.05
Sigmar1O55242 Bcl7b-201ENSMUST00000031692 1758 ntAPPRIS P2 TSL 1 (best) BASIC15.35■□□□□ 0.05
Retrieved 100 of 76,532 protein–RNA pairs in 71.4 ms