Protein–RNA interactions for Protein: O55038

Cxcl13, C-X-C motif chemokine 13, mousemouse

Predictions only

Length 109 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cxcl13O55038 Mapkap1-202ENSMUST00000113124 1758 ntAPPRIS ALT1 TSL 5 BASIC19.22■□□□□ 0.67
Cxcl13O55038 Btf3l4-203ENSMUST00000102741 1033 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
Cxcl13O55038 Htatsf1-202ENSMUST00000114751 1128 ntTSL 1 (best) BASIC19.22■□□□□ 0.67
Cxcl13O55038 Tmem11-201ENSMUST00000062677 1457 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
Cxcl13O55038 D17Wsu92e-201ENSMUST00000075076 1470 ntTSL 1 (best) BASIC19.22■□□□□ 0.67
Cxcl13O55038 Nrsn1-201ENSMUST00000057866 2222 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
Cxcl13O55038 Slc39a13-201ENSMUST00000073575 2469 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
Cxcl13O55038 Rnf115-201ENSMUST00000029740 2209 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
Cxcl13O55038 Cyp2r1-202ENSMUST00000119712 917 ntTSL 5 BASIC19.2■□□□□ 0.66
Cxcl13O55038 Csrp1-201ENSMUST00000027677 1823 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
Cxcl13O55038 Csrp1-202ENSMUST00000097561 1828 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
Cxcl13O55038 Hnrnpul1-202ENSMUST00000108401 1240 ntTSL 1 (best) BASIC19.19■□□□□ 0.66
Cxcl13O55038 Sike1-202ENSMUST00000119450 774 ntTSL 3 BASIC19.19■□□□□ 0.66
Cxcl13O55038 Ipmk-203ENSMUST00000121446 1492 ntAPPRIS ALT2 TSL 5 BASIC19.19■□□□□ 0.66
Cxcl13O55038 Usp2-206ENSMUST00000176416 1486 ntAPPRIS ALT2 TSL 1 (best) BASIC19.19■□□□□ 0.66
Cxcl13O55038 Gm10499-202ENSMUST00000174778 1698 ntTSL 1 (best) BASIC19.19■□□□□ 0.66
Cxcl13O55038 Slc44a1-203ENSMUST00000107646 1974 ntTSL 5 BASIC19.19■□□□□ 0.66
Cxcl13O55038 Six3-201ENSMUST00000162695 2838 ntAPPRIS ALT2 TSL 5 BASIC19.19■□□□□ 0.66
Cxcl13O55038 Xkr7-201ENSMUST00000037235 2711 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
Cxcl13O55038 Shox2-204ENSMUST00000162439 1081 ntTSL 1 (best) BASIC19.18■□□□□ 0.66
Cxcl13O55038 Ppp1r35-201ENSMUST00000031739 956 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
Cxcl13O55038 Pgls-201ENSMUST00000034264 893 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
Cxcl13O55038 Scn1b-201ENSMUST00000098548 1573 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
Cxcl13O55038 Tmem106c-201ENSMUST00000064200 1635 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
Cxcl13O55038 St7-205ENSMUST00000081635 2115 ntTSL 1 (best) BASIC19.17■□□□□ 0.66
Cxcl13O55038 Kcna7-201ENSMUST00000107774 2182 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
Cxcl13O55038 H1fx-201ENSMUST00000056403 1217 ntAPPRIS P1 BASIC19.16■□□□□ 0.66
Cxcl13O55038 Dbndd2-202ENSMUST00000069385 1658 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
Cxcl13O55038 E2f6-201ENSMUST00000020908 2418 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
Cxcl13O55038 Fam220a-201ENSMUST00000067145 2198 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
Cxcl13O55038 Runx2-211ENSMUST00000162629 1607 ntAPPRIS ALT2 TSL 5 BASIC19.15■□□□□ 0.66
Cxcl13O55038 Igfbp3-202ENSMUST00000135887 1709 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
Cxcl13O55038 Rasgef1c-203ENSMUST00000093142 2216 ntAPPRIS P3 TSL 1 (best) BASIC19.15■□□□□ 0.66
Cxcl13O55038 Lin7b-201ENSMUST00000003971 735 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
Cxcl13O55038 Prph-202ENSMUST00000047104 1865 ntAPPRIS P3 TSL 1 (best) BASIC19.15■□□□□ 0.66
Cxcl13O55038 AC117769.4-201ENSMUST00000225679 685 ntBASIC19.14■□□□□ 0.65
Cxcl13O55038 Htra4-201ENSMUST00000084031 2180 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
Cxcl13O55038 Fam92a-208ENSMUST00000177837 1325 ntAPPRIS ALT2 TSL 5 BASIC19.14■□□□□ 0.65
Cxcl13O55038 Slc25a33-201ENSMUST00000105686 1887 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
Cxcl13O55038 Cln6-201ENSMUST00000034776 2142 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
Cxcl13O55038 Epb41l4b-203ENSMUST00000095076 6746 ntAPPRIS ALT2 TSL 5 BASIC19.13■□□□□ 0.65
Cxcl13O55038 Cited1-202ENSMUST00000101336 1090 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
Cxcl13O55038 Ntn5-203ENSMUST00000183120 1491 ntTSL 1 (best) BASIC19.13■□□□□ 0.65
Cxcl13O55038 Srd5a3-201ENSMUST00000031143 1747 ntAPPRIS P2 TSL 1 (best) BASIC19.13■□□□□ 0.65
Cxcl13O55038 Olfm2-203ENSMUST00000215999 1895 ntAPPRIS ALT2 TSL 3 BASIC19.13■□□□□ 0.65
Cxcl13O55038 Foxc1-201ENSMUST00000062292 5844 ntAPPRIS P1 BASIC19.13■□□□□ 0.65
Cxcl13O55038 Siah1a-201ENSMUST00000045296 1968 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
Cxcl13O55038 Sec63-201ENSMUST00000019937 6032 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
Cxcl13O55038 Slc16a11-207ENSMUST00000136328 1403 ntTSL 5 BASIC19.12■□□□□ 0.65
Cxcl13O55038 Sdccag3-202ENSMUST00000077983 1955 ntAPPRIS ALT2 TSL 1 (best) BASIC19.12■□□□□ 0.65
Cxcl13O55038 En1-201ENSMUST00000079721 2624 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
Cxcl13O55038 Nudt6-204ENSMUST00000108118 935 ntTSL 5 BASIC19.11■□□□□ 0.65
Cxcl13O55038 Nudt6-201ENSMUST00000052645 1155 ntAPPRIS ALT2 TSL 1 (best) BASIC19.11■□□□□ 0.65
Cxcl13O55038 Nudt6-202ENSMUST00000099130 1070 ntAPPRIS P3 TSL 1 (best) BASIC19.11■□□□□ 0.65
Cxcl13O55038 Gm38287-201ENSMUST00000195193 2051 ntTSL 3 BASIC19.11■□□□□ 0.65
Cxcl13O55038 Tmem235-201ENSMUST00000093905 1820 ntAPPRIS P1 TSL 5 BASIC19.11■□□□□ 0.65
Cxcl13O55038 Panx2-202ENSMUST00000161372 2314 ntTSL 1 (best) BASIC19.11■□□□□ 0.65
Cxcl13O55038 Ppcs-201ENSMUST00000030385 1443 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
Cxcl13O55038 Kcnmb4os2-203ENSMUST00000127070 1048 ntTSL 2 BASIC19.1■□□□□ 0.65
Cxcl13O55038 Lsm4-201ENSMUST00000034311 925 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
Cxcl13O55038 Hnrnpl-201ENSMUST00000038572 2142 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
Cxcl13O55038 Bag1-203ENSMUST00000191273 1348 ntAPPRIS ALT2 TSL 1 (best) BASIC19.09■□□□□ 0.65
Cxcl13O55038 Ttc9-201ENSMUST00000036116 2042 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
Cxcl13O55038 Tnfsfm13-203ENSMUST00000180587 2235 ntAPPRIS P3 TSL 2 BASIC19.09■□□□□ 0.65
Cxcl13O55038 Tsen34-204ENSMUST00000108630 1779 ntTSL 1 (best) BASIC19.09■□□□□ 0.65
Cxcl13O55038 Mxra7-201ENSMUST00000021170 2063 ntAPPRIS P3 TSL 1 (best) BASIC19.09■□□□□ 0.65
Cxcl13O55038 Fgf16-201ENSMUST00000033581 1645 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.65
Cxcl13O55038 Fam50b-202ENSMUST00000221037 1345 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.65
Cxcl13O55038 Becn1-216ENSMUST00000170502 725 ntTSL 1 (best) BASIC19.08■□□□□ 0.64
Cxcl13O55038 AC161180.1-201ENSMUST00000223439 933 ntAPPRIS P1 BASIC19.08■□□□□ 0.64
Cxcl13O55038 Tm2d2-201ENSMUST00000033961 1281 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.64
Cxcl13O55038 Zswim5-201ENSMUST00000044823 5582 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.64
Cxcl13O55038 Mpp6-209ENSMUST00000204545 2418 ntAPPRIS P1 TSL 5 BASIC19.08■□□□□ 0.64
Cxcl13O55038 Tspan33-202ENSMUST00000115250 1977 ntAPPRIS ALT1 TSL 1 (best) BASIC19.07■□□□□ 0.64
Cxcl13O55038 Gm5921-201ENSMUST00000075898 882 ntBASIC19.07■□□□□ 0.64
Cxcl13O55038 Cited2-203ENSMUST00000219558 2411 ntAPPRIS P1 BASIC19.07■□□□□ 0.64
Cxcl13O55038 AC164433.2-201ENSMUST00000226346 1701 ntBASIC19.07■□□□□ 0.64
Cxcl13O55038 Rnf39-201ENSMUST00000040498 1579 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
Cxcl13O55038 Dapk2-201ENSMUST00000034944 1772 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
Cxcl13O55038 Dnajc21-201ENSMUST00000136591 2060 ntAPPRIS P1 TSL 5 BASIC19.06■□□□□ 0.64
Cxcl13O55038 Zc3h6-201ENSMUST00000110319 1484 ntTSL 1 (best) BASIC19.06■□□□□ 0.64
Cxcl13O55038 Ei24-202ENSMUST00000163192 2309 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
Cxcl13O55038 Prr5-202ENSMUST00000171460 1719 ntAPPRIS ALT2 TSL 1 (best) BASIC19.05■□□□□ 0.64
Cxcl13O55038 Sox17-202ENSMUST00000116652 1512 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
Cxcl13O55038 Cldnd1-204ENSMUST00000162057 1540 ntAPPRIS P1 TSL 5 BASIC19.05■□□□□ 0.64
Cxcl13O55038 Neurl1b-202ENSMUST00000182897 1231 ntTSL 5 BASIC19.05■□□□□ 0.64
Cxcl13O55038 Foxe3-201ENSMUST00000050940 867 ntAPPRIS P1 BASIC19.05■□□□□ 0.64
Cxcl13O55038 Kansl2-201ENSMUST00000023727 2311 ntAPPRIS ALT2 TSL 5 BASIC19.05■□□□□ 0.64
Cxcl13O55038 Zdhhc2-205ENSMUST00000167766 1759 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
Cxcl13O55038 Snta1-201ENSMUST00000028991 2125 ntAPPRIS ALT2 TSL 1 (best) BASIC19.04■□□□□ 0.64
Cxcl13O55038 Tbc1d10a-206ENSMUST00000180088 1921 ntAPPRIS P2 TSL 1 (best) BASIC19.04■□□□□ 0.64
Cxcl13O55038 Cmas-201ENSMUST00000032419 1760 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
Cxcl13O55038 6430628N08Rik-202ENSMUST00000165938 1602 ntTSL 5 BASIC19.03■□□□□ 0.64
Cxcl13O55038 Dusp2-201ENSMUST00000028846 1617 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
Cxcl13O55038 Dleu7-201ENSMUST00000063169 1314 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
Cxcl13O55038 Gfra4-206ENSMUST00000110240 1426 ntAPPRIS ALT2 TSL 1 (best) BASIC19.03■□□□□ 0.64
Cxcl13O55038 Ei24-201ENSMUST00000115086 2220 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
Cxcl13O55038 Fam89b-203ENSMUST00000161368 1160 ntTSL 1 (best) BASIC19.03■□□□□ 0.64
Cxcl13O55038 Dhrs11-201ENSMUST00000047560 1254 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
Cxcl13O55038 Mpnd-208ENSMUST00000159996 1444 ntAPPRIS ALT2 TSL 5 BASIC19.02■□□□□ 0.64
Retrieved 100 of 76,532 protein–RNA pairs in 13 ms