Protein–RNA interactions for Protein: O08791

Ebf3, Transcription factor COE3, mousemouse

Predictions only

Length 596 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ebf3O08791 Hoxb3os-202ENSMUST00000147410 1945 ntTSL 5 BASIC23.37■■□□□ 1.33
Ebf3O08791 A230005M16Rik-201ENSMUST00000137661 1605 ntTSL 1 (best) BASIC23.37■■□□□ 1.33
Ebf3O08791 5031425E22Rik-201ENSMUST00000101522 2110 ntBASIC23.37■■□□□ 1.33
Ebf3O08791 Kctd6-201ENSMUST00000022272 1650 ntAPPRIS P1 TSL 1 (best) BASIC23.37■■□□□ 1.33
Ebf3O08791 Ethe1-201ENSMUST00000077191 1484 ntAPPRIS P1 TSL 1 (best) BASIC23.36■■□□□ 1.33
Ebf3O08791 Zswim6-201ENSMUST00000105097 5456 ntTSL 5 BASIC23.36■■□□□ 1.33
Ebf3O08791 Arpc2-203ENSMUST00000113820 1439 ntAPPRIS P1 TSL 1 (best) BASIC23.36■■□□□ 1.33
Ebf3O08791 Ppcs-201ENSMUST00000030385 1443 ntAPPRIS P1 TSL 1 (best) BASIC23.36■■□□□ 1.33
Ebf3O08791 B3gat1-201ENSMUST00000115269 1665 ntTSL 1 (best) BASIC23.35■■□□□ 1.33
Ebf3O08791 Dnpep-201ENSMUST00000066668 2488 ntAPPRIS P3 TSL 1 (best) BASIC23.35■■□□□ 1.33
Ebf3O08791 Ybx3-202ENSMUST00000087865 1684 ntAPPRIS ALT2 TSL 1 (best) BASIC23.35■■□□□ 1.33
Ebf3O08791 Lin7b-201ENSMUST00000003971 735 ntAPPRIS P1 TSL 1 (best) BASIC23.34■■□□□ 1.33
Ebf3O08791 Gm20458-201ENSMUST00000164863 1369 ntAPPRIS P1 TSL 5 BASIC23.34■■□□□ 1.33
Ebf3O08791 Kcnc3-206ENSMUST00000208651 2728 ntAPPRIS ALT2 TSL 5 BASIC23.34■■□□□ 1.33
Ebf3O08791 St3gal2-202ENSMUST00000117534 2177 ntTSL 1 (best) BASIC23.34■■□□□ 1.33
Ebf3O08791 Gm5921-201ENSMUST00000075898 882 ntBASIC23.33■■□□□ 1.33
Ebf3O08791 Gm7276-201ENSMUST00000097520 1252 ntAPPRIS P1 BASIC23.33■■□□□ 1.33
Ebf3O08791 Kcnmb4os2-203ENSMUST00000127070 1048 ntTSL 2 BASIC23.32■■□□□ 1.32
Ebf3O08791 H1fx-201ENSMUST00000056403 1217 ntAPPRIS P1 BASIC23.32■■□□□ 1.32
Ebf3O08791 Sox3-201ENSMUST00000135107 2065 ntAPPRIS P1 BASIC23.31■■□□□ 1.32
Ebf3O08791 Dusp7-201ENSMUST00000172306 3213 ntAPPRIS P1 TSL 1 (best) BASIC23.31■■□□□ 1.32
Ebf3O08791 Gtpbp2-201ENSMUST00000024748 2966 ntAPPRIS P1 TSL 1 (best) BASIC23.31■■□□□ 1.32
Ebf3O08791 Fam92a-202ENSMUST00000108285 1639 ntAPPRIS P3 TSL 5 BASIC23.3■■□□□ 1.32
Ebf3O08791 Ppp1ca-201ENSMUST00000046094 1379 ntAPPRIS P1 TSL 1 (best) BASIC23.3■■□□□ 1.32
Ebf3O08791 Six3-201ENSMUST00000162695 2838 ntAPPRIS ALT2 TSL 5 BASIC23.3■■□□□ 1.32
Ebf3O08791 Ube2k-203ENSMUST00000201266 1449 ntTSL 5 BASIC23.3■■□□□ 1.32
Ebf3O08791 Hexdc-201ENSMUST00000038831 2378 ntAPPRIS ALT2 TSL 5 BASIC23.3■■□□□ 1.32
Ebf3O08791 Paqr3-202ENSMUST00000112968 1875 ntTSL 1 (best) BASIC23.3■■□□□ 1.32
Ebf3O08791 Fam92a-208ENSMUST00000177837 1325 ntAPPRIS ALT2 TSL 5 BASIC23.3■■□□□ 1.32
Ebf3O08791 Faim-202ENSMUST00000112911 803 ntAPPRIS ALT1 TSL 2 BASIC23.29■■□□□ 1.32
Ebf3O08791 Osbpl10-207ENSMUST00000183104 2477 ntAPPRIS P1 TSL 5 BASIC23.29■■□□□ 1.32
Ebf3O08791 Tm2d2-201ENSMUST00000033961 1281 ntAPPRIS P1 TSL 1 (best) BASIC23.29■■□□□ 1.32
Ebf3O08791 Galr3-201ENSMUST00000058004 1245 ntAPPRIS P1 TSL 1 (best) BASIC23.29■■□□□ 1.32
Ebf3O08791 Neurl1b-202ENSMUST00000182897 1231 ntTSL 5 BASIC23.28■■□□□ 1.32
Ebf3O08791 Gm5812-201ENSMUST00000061073 957 ntBASIC23.28■■□□□ 1.32
Ebf3O08791 Hecw2-202ENSMUST00000097741 1132 ntTSL 1 (best) BASIC23.28■■□□□ 1.32
Ebf3O08791 Cadm1-206ENSMUST00000143026 1643 ntTSL 5 BASIC23.28■■□□□ 1.32
Ebf3O08791 St7-208ENSMUST00000115419 2194 ntTSL 1 (best) BASIC23.28■■□□□ 1.32
Ebf3O08791 Mapk1-201ENSMUST00000023462 2390 ntAPPRIS P1 TSL 1 (best) BASIC23.27■■□□□ 1.32
Ebf3O08791 Slc1a5-201ENSMUST00000108496 2764 ntAPPRIS P1 TSL 1 (best) BASIC23.27■■□□□ 1.32
Ebf3O08791 Jmy-202ENSMUST00000220513 1843 ntTSL 1 (best) BASIC23.27■■□□□ 1.32
Ebf3O08791 Sec24d-208ENSMUST00000200333 307 ntTSL 1 (best) BASIC23.27■■□□□ 1.32
Ebf3O08791 Gm44428-201ENSMUST00000204474 874 ntBASIC23.27■■□□□ 1.32
Ebf3O08791 Lsm4-205ENSMUST00000210987 636 ntTSL 5 BASIC23.27■■□□□ 1.32
Ebf3O08791 Pxmp2-201ENSMUST00000031472 1041 ntAPPRIS P1 TSL 1 (best) BASIC23.27■■□□□ 1.32
Ebf3O08791 Fam168b-201ENSMUST00000047534 5030 ntAPPRIS P1 TSL 1 (best) BASIC23.27■■□□□ 1.32
Ebf3O08791 Fam220a-201ENSMUST00000067145 2198 ntAPPRIS P1 TSL 1 (best) BASIC23.27■■□□□ 1.32
Ebf3O08791 Gfra4-206ENSMUST00000110240 1426 ntAPPRIS ALT2 TSL 1 (best) BASIC23.26■■□□□ 1.31
Ebf3O08791 Htatsf1-202ENSMUST00000114751 1128 ntTSL 1 (best) BASIC23.25■■□□□ 1.31
Ebf3O08791 Gal3st1-202ENSMUST00000078757 1749 ntAPPRIS P1 TSL 1 (best) BASIC23.25■■□□□ 1.31
Ebf3O08791 Ssbp4-205ENSMUST00000210369 1828 ntTSL 2 BASIC23.24■■□□□ 1.31
Ebf3O08791 Efcc1-202ENSMUST00000159570 2293 ntAPPRIS P2 TSL 5 BASIC23.24■■□□□ 1.31
Ebf3O08791 Fam89b-203ENSMUST00000161368 1160 ntTSL 1 (best) BASIC23.24■■□□□ 1.31
Ebf3O08791 H2-Q5-202ENSMUST00000172979 998 ntAPPRIS P1 TSL 5 BASIC23.24■■□□□ 1.31
Ebf3O08791 Ccsap-201ENSMUST00000034452 2390 ntAPPRIS P1 TSL 1 (best) BASIC23.24■■□□□ 1.31
Ebf3O08791 Nudt3-203ENSMUST00000114886 996 ntTSL 2 BASIC23.23■■□□□ 1.31
Ebf3O08791 Gipc1-201ENSMUST00000019577 1522 ntAPPRIS P1 TSL 1 (best) BASIC23.23■■□□□ 1.31
Ebf3O08791 Gm21989-201ENSMUST00000174530 1609 ntTSL 1 (best) BASIC23.22■■□□□ 1.31
Ebf3O08791 Psip1-203ENSMUST00000107215 1898 ntTSL 1 (best) BASIC23.22■■□□□ 1.31
Ebf3O08791 Crls1-201ENSMUST00000028835 1924 ntAPPRIS P1 TSL 1 (best) BASIC23.22■■□□□ 1.31
Ebf3O08791 P3h4-201ENSMUST00000066489 2178 ntAPPRIS P2 TSL 1 (best) BASIC23.21■■□□□ 1.31
Ebf3O08791 Pdcd4-203ENSMUST00000165617 1806 ntAPPRIS P1 TSL 1 (best) BASIC23.21■■□□□ 1.31
Ebf3O08791 Oaz2-206ENSMUST00000153700 1843 ntAPPRIS P2 TSL 5 BASIC23.2■■□□□ 1.3
Ebf3O08791 Acvr2b-201ENSMUST00000035093 1729 ntTSL 5 BASIC23.2■■□□□ 1.3
Ebf3O08791 Etfa-201ENSMUST00000034866 1392 ntAPPRIS P1 TSL 1 (best) BASIC23.2■■□□□ 1.3
Ebf3O08791 Hopx-203ENSMUST00000120827 1217 ntAPPRIS P1 TSL 1 (best) BASIC23.2■■□□□ 1.3
Ebf3O08791 Tmem127-202ENSMUST00000174288 842 ntTSL 2 BASIC23.2■■□□□ 1.3
Ebf3O08791 Ccsap-202ENSMUST00000122421 2673 ntAPPRIS P1 TSL 1 (best) BASIC23.19■■□□□ 1.3
Ebf3O08791 Wnt2-201ENSMUST00000010941 2255 ntAPPRIS P1 TSL 1 (best) BASIC23.19■■□□□ 1.3
Ebf3O08791 Foxa2-202ENSMUST00000109964 2070 ntAPPRIS ALT2 TSL 1 (best) BASIC23.19■■□□□ 1.3
Ebf3O08791 Suv39h2-202ENSMUST00000060618 1831 ntTSL 1 (best) BASIC23.19■■□□□ 1.3
Ebf3O08791 Zc3h6-201ENSMUST00000110319 1484 ntTSL 1 (best) BASIC23.18■■□□□ 1.3
Ebf3O08791 D17Wsu92e-201ENSMUST00000075076 1470 ntTSL 1 (best) BASIC23.18■■□□□ 1.3
Ebf3O08791 Fam50b-202ENSMUST00000221037 1345 ntAPPRIS P1 TSL 1 (best) BASIC23.18■■□□□ 1.3
Ebf3O08791 Hnrnpul1-202ENSMUST00000108401 1240 ntTSL 1 (best) BASIC23.18■■□□□ 1.3
Ebf3O08791 Becn1-216ENSMUST00000170502 725 ntTSL 1 (best) BASIC23.18■■□□□ 1.3
Ebf3O08791 AC161180.1-201ENSMUST00000223439 933 ntAPPRIS P1 BASIC23.18■■□□□ 1.3
Ebf3O08791 Tmem42-201ENSMUST00000084733 1041 ntAPPRIS P1 TSL 1 (best) BASIC23.18■■□□□ 1.3
Ebf3O08791 Csnk1g2-201ENSMUST00000079773 2348 ntTSL 1 (best) BASIC23.17■■□□□ 1.3
Ebf3O08791 Ints11-202ENSMUST00000120794 1884 ntTSL 5 BASIC23.17■■□□□ 1.3
Ebf3O08791 Tirap-205ENSMUST00000176685 1783 ntAPPRIS P1 TSL 1 (best) BASIC23.17■■□□□ 1.3
Ebf3O08791 Fam174a-201ENSMUST00000059975 2112 ntAPPRIS P1 TSL 1 (best) BASIC23.17■■□□□ 1.3
Ebf3O08791 Vdac1-202ENSMUST00000102758 2022 ntAPPRIS P1 TSL 1 (best) BASIC23.17■■□□□ 1.3
Ebf3O08791 Gm29735-201ENSMUST00000209599 660 ntAPPRIS P1 BASIC23.17■■□□□ 1.3
Ebf3O08791 H2afy-202ENSMUST00000045788 1933 ntTSL 1 (best) BASIC23.17■■□□□ 1.3
Ebf3O08791 Kctd2-201ENSMUST00000103035 1764 ntAPPRIS P1 TSL 1 (best) BASIC23.17■■□□□ 1.3
Ebf3O08791 Mapkap1-202ENSMUST00000113124 1758 ntAPPRIS ALT1 TSL 5 BASIC23.17■■□□□ 1.3
Ebf3O08791 Gm4419-202ENSMUST00000226239 1431 ntBASIC23.16■■□□□ 1.3
Ebf3O08791 Usf1-210ENSMUST00000167546 1822 ntAPPRIS P1 TSL 5 BASIC23.16■■□□□ 1.3
Ebf3O08791 Sh3rf1-201ENSMUST00000034060 5479 ntAPPRIS P1 TSL 1 (best) BASIC23.16■■□□□ 1.3
Ebf3O08791 Deaf1-201ENSMUST00000080553 2135 ntAPPRIS P1 TSL 1 (best) BASIC23.15■■□□□ 1.3
Ebf3O08791 Irf2bp2-201ENSMUST00000054960 5080 ntAPPRIS P1 TSL 2 BASIC23.15■■□□□ 1.3
Ebf3O08791 Agpat5-201ENSMUST00000033847 2841 ntAPPRIS ALT2 TSL 1 (best) BASIC23.15■■□□□ 1.3
Ebf3O08791 B4galt2-201ENSMUST00000030266 2312 ntAPPRIS P1 TSL 1 (best) BASIC23.15■■□□□ 1.3
Ebf3O08791 Homer3-201ENSMUST00000003669 2323 ntAPPRIS ALT1 TSL 1 (best) BASIC23.15■■□□□ 1.3
Ebf3O08791 Ildr2-206ENSMUST00000194964 2467 ntAPPRIS ALT2 TSL 1 (best) BASIC23.15■■□□□ 1.3
Ebf3O08791 Gnaq-201ENSMUST00000025541 5644 ntAPPRIS P1 TSL 1 (best) BASIC23.15■■□□□ 1.3
Ebf3O08791 Irak1-202ENSMUST00000068286 2537 ntAPPRIS P3 TSL 1 (best) BASIC23.14■■□□□ 1.29
Ebf3O08791 Ipmk-203ENSMUST00000121446 1492 ntAPPRIS ALT2 TSL 5 BASIC23.13■■□□□ 1.29
Ebf3O08791 Snx21-203ENSMUST00000152471 1243 ntTSL 1 (best) BASIC23.13■■□□□ 1.29
Retrieved 100 of 76,532 protein–RNA pairs in 169.2 ms