Protein–RNA interactions for Protein: O08641

Sh3yl1, SH3 domain-containing YSC84-like protein 1, mousemouse

Predictions only

Length 340 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sh3yl1O08641 Fbl-201ENSMUST00000042405 1197 ntAPPRIS P1 TSL 1 (best) BASIC21.31■■□□□ 1
Sh3yl1O08641 Ccna1-202ENSMUST00000197238 1719 ntAPPRIS P1 TSL 5 BASIC21.31■■□□□ 1
Sh3yl1O08641 Lsm14b-201ENSMUST00000055485 2534 ntAPPRIS P1 TSL 1 (best) BASIC21.31■■□□□ 1
Sh3yl1O08641 Ppp4c-201ENSMUST00000032936 1359 ntAPPRIS P1 TSL 1 (best) BASIC21.31■■□□□ 1
Sh3yl1O08641 Foxe1-201ENSMUST00000095097 2804 ntAPPRIS P1 BASIC21.31■■□□□ 1
Sh3yl1O08641 Ltk-205ENSMUST00000140224 2240 ntAPPRIS ALT2 TSL 1 (best) BASIC21.31■■□□□ 1
Sh3yl1O08641 Ltk-206ENSMUST00000182203 2232 ntAPPRIS ALT2 TSL 1 (best) BASIC21.31■■□□□ 1
Sh3yl1O08641 Cadm1-209ENSMUST00000152459 1784 ntTSL 1 (best) BASIC21.31■■□□□ 1
Sh3yl1O08641 Rarres1-201ENSMUST00000054825 1325 ntAPPRIS P1 TSL 1 (best) BASIC21.3■■□□□ 1
Sh3yl1O08641 D130020L05Rik-201ENSMUST00000180800 2431 ntTSL 1 (best) BASIC21.3■■□□□ 1
Sh3yl1O08641 Azin2-203ENSMUST00000119354 1921 ntTSL 1 (best) BASIC21.3■■□□□ 1
Sh3yl1O08641 E130304I02Rik-202ENSMUST00000187873 696 ntTSL 1 (best) BASIC21.3■■□□□ 1
Sh3yl1O08641 Card19-201ENSMUST00000048946 804 ntAPPRIS P1 TSL 1 (best) BASIC21.3■■□□□ 1
Sh3yl1O08641 Dcaf15-201ENSMUST00000041367 2312 ntTSL 1 (best) BASIC21.3■■□□□ 1
Sh3yl1O08641 Kat2b-201ENSMUST00000000724 4653 ntAPPRIS P1 TSL 1 (best) BASIC21.3■■□□□ 1
Sh3yl1O08641 Efna2-201ENSMUST00000003154 2131 ntAPPRIS P1 TSL 1 (best) BASIC21.29■■□□□ 1
Sh3yl1O08641 Tmem260-210ENSMUST00000227440 2222 ntAPPRIS ALT2 BASIC21.29■■□□□ 1
Sh3yl1O08641 Msl1-203ENSMUST00000107485 2091 ntTSL 1 (best) BASIC21.29■■□□□ 1
Sh3yl1O08641 Etfa-201ENSMUST00000034866 1392 ntAPPRIS P1 TSL 1 (best) BASIC21.29■■□□□ 1
Sh3yl1O08641 Thap8-202ENSMUST00000108187 1184 ntAPPRIS P5 TSL 2 BASIC21.29■■□□□ 1
Sh3yl1O08641 Gm20512-201ENSMUST00000172483 618 ntTSL 1 (best) BASIC21.29■■□□□ 1
Sh3yl1O08641 Nnat-208ENSMUST00000173595 927 ntTSL 2 BASIC21.29■■□□□ 1
Sh3yl1O08641 Trafd1-201ENSMUST00000042312 2503 ntAPPRIS P4 TSL 1 (best) BASIC21.29■■□□□ 1
Sh3yl1O08641 Gipc1-201ENSMUST00000019577 1522 ntAPPRIS P1 TSL 1 (best) BASIC21.29■■□□□ 1
Sh3yl1O08641 Crlf2-201ENSMUST00000044579 1323 ntAPPRIS P3 TSL 1 (best) BASIC21.29■■□□□ 1
Sh3yl1O08641 Egr4-201ENSMUST00000095759 2148 ntAPPRIS P1 TSL 1 (best) BASIC21.28■■□□□ 1
Sh3yl1O08641 Pom121-201ENSMUST00000111171 5580 ntAPPRIS P1 TSL 1 (best) BASIC21.28■■□□□ 1
Sh3yl1O08641 Ctage5-211ENSMUST00000176322 2649 ntTSL 5 BASIC21.28■■□□□ 1
Sh3yl1O08641 Epop-201ENSMUST00000052281 2314 ntAPPRIS P1 BASIC21.28■■□□□ 1
Sh3yl1O08641 Adra1d-201ENSMUST00000103184 1899 ntAPPRIS P1 TSL 1 (best) BASIC21.28■■□□□ 1
Sh3yl1O08641 Aebp2-203ENSMUST00000095350 2575 ntAPPRIS ALT2 TSL 1 (best) BASIC21.28■■□□□ 1
Sh3yl1O08641 Armc10-201ENSMUST00000072896 2221 ntAPPRIS P1 TSL 1 (best) BASIC21.27■■□□□ 1
Sh3yl1O08641 Gm16437-201ENSMUST00000025669 507 ntBASIC21.27■■□□□ 1
Sh3yl1O08641 Aspscr1-203ENSMUST00000106158 1690 ntTSL 5 BASIC21.27■■□□□ 1
Sh3yl1O08641 Arpc5l-202ENSMUST00000112862 1339 ntAPPRIS P1 TSL 1 (best) BASIC21.27■□□□□ 0.99
Sh3yl1O08641 Onecut3-201ENSMUST00000051773 4776 ntAPPRIS P1 TSL 1 (best) BASIC21.27■□□□□ 0.99
Sh3yl1O08641 Cys1-207ENSMUST00000186602 1757 ntAPPRIS P1 TSL 1 (best) BASIC21.26■□□□□ 0.99
Sh3yl1O08641 Gas1-202ENSMUST00000223933 1155 ntAPPRIS P2 BASIC21.26■□□□□ 0.99
Sh3yl1O08641 Crct1-201ENSMUST00000029521 718 ntAPPRIS P1 TSL 1 (best) BASIC21.26■□□□□ 0.99
Sh3yl1O08641 Gm9806-201ENSMUST00000051080 552 ntBASIC21.26■□□□□ 0.99
Sh3yl1O08641 Pgbd5-204ENSMUST00000140012 3222 ntAPPRIS ALT2 TSL 5 BASIC21.26■□□□□ 0.99
Sh3yl1O08641 Gm15918-201ENSMUST00000137259 689 ntTSL 3 BASIC21.25■□□□□ 0.99
Sh3yl1O08641 Trappc6b-201ENSMUST00000021380 1255 ntAPPRIS P1 TSL 1 (best) BASIC21.25■□□□□ 0.99
Sh3yl1O08641 Gm9812-201ENSMUST00000061934 968 ntBASIC21.25■□□□□ 0.99
Sh3yl1O08641 Dennd5a-202ENSMUST00000106722 4862 ntTSL 1 (best) BASIC21.24■□□□□ 0.99
Sh3yl1O08641 Larp4b-204ENSMUST00000188939 2658 ntTSL 1 (best) BASIC21.24■□□□□ 0.99
Sh3yl1O08641 Sox1-201ENSMUST00000180353 4832 ntAPPRIS P1 BASIC21.24■□□□□ 0.99
Sh3yl1O08641 Ndufs3-201ENSMUST00000005647 1046 ntAPPRIS P1 TSL 1 (best) BASIC21.24■□□□□ 0.99
Sh3yl1O08641 Tmpo-204ENSMUST00000099355 1953 ntTSL 1 (best) BASIC21.24■□□□□ 0.99
Sh3yl1O08641 Nog-201ENSMUST00000061728 1695 ntAPPRIS P1 BASIC21.24■□□□□ 0.99
Sh3yl1O08641 Kctd5-201ENSMUST00000017090 2443 ntAPPRIS P1 TSL 1 (best) BASIC21.24■□□□□ 0.99
Sh3yl1O08641 Strn3-202ENSMUST00000169503 2791 ntTSL 1 (best) BASIC21.23■□□□□ 0.99
Sh3yl1O08641 Brf1-201ENSMUST00000011302 2615 ntAPPRIS P1 TSL 5 BASIC21.23■□□□□ 0.99
Sh3yl1O08641 Mir6538-201ENSMUST00000183713 110 ntBASIC21.23■□□□□ 0.99
Sh3yl1O08641 A030005K14Rik-201ENSMUST00000193762 1093 ntAPPRIS P1 BASIC21.23■□□□□ 0.99
Sh3yl1O08641 Stbd1-202ENSMUST00000200941 523 ntTSL 1 (best) BASIC21.23■□□□□ 0.99
Sh3yl1O08641 AC122317.2-201ENSMUST00000218708 1248 ntBASIC21.23■□□□□ 0.99
Sh3yl1O08641 Ybx3-202ENSMUST00000087865 1684 ntAPPRIS ALT2 TSL 1 (best) BASIC21.23■□□□□ 0.99
Sh3yl1O08641 Tmpo-203ENSMUST00000092219 1854 ntTSL 1 (best) BASIC21.23■□□□□ 0.99
Sh3yl1O08641 Gm11687-201ENSMUST00000118911 886 ntBASIC21.22■□□□□ 0.99
Sh3yl1O08641 Hook1-202ENSMUST00000107083 1506 ntTSL 1 (best) BASIC21.22■□□□□ 0.99
Sh3yl1O08641 Whrn-202ENSMUST00000063672 2804 ntTSL 1 (best) BASIC21.22■□□□□ 0.99
Sh3yl1O08641 Unc119-203ENSMUST00000108295 1371 ntTSL 3 BASIC21.22■□□□□ 0.99
Sh3yl1O08641 Irx1-201ENSMUST00000077337 2373 ntAPPRIS P2 TSL 1 (best) BASIC21.22■□□□□ 0.99
Sh3yl1O08641 Actr3b-202ENSMUST00000128727 2031 ntTSL 1 (best) BASIC21.21■□□□□ 0.99
Sh3yl1O08641 Gadd45a-201ENSMUST00000043098 1223 ntAPPRIS P1 TSL 1 (best) BASIC21.21■□□□□ 0.99
Sh3yl1O08641 Ube2h-201ENSMUST00000094543 975 ntTSL 1 (best) BASIC21.21■□□□□ 0.99
Sh3yl1O08641 Eid1-201ENSMUST00000164756 1691 ntAPPRIS P1 BASIC21.21■□□□□ 0.99
Sh3yl1O08641 Qk-202ENSMUST00000097414 4658 ntAPPRIS P1 TSL 1 (best) BASIC21.2■□□□□ 0.99
Sh3yl1O08641 Tcf4-246ENSMUST00000202116 2986 ntTSL 1 (best) BASIC21.2■□□□□ 0.98
Sh3yl1O08641 Fam181b-201ENSMUST00000051179 2003 ntAPPRIS P1 BASIC21.2■□□□□ 0.98
Sh3yl1O08641 Ip6k1-208ENSMUST00000176854 2251 ntTSL 1 (best) BASIC21.2■□□□□ 0.98
Sh3yl1O08641 Arhgef25-205ENSMUST00000218654 2475 ntTSL 5 BASIC21.19■□□□□ 0.98
Sh3yl1O08641 Klc1-201ENSMUST00000084941 2504 ntAPPRIS P3 TSL 1 (best) BASIC21.19■□□□□ 0.98
Sh3yl1O08641 Acvr2b-201ENSMUST00000035093 1729 ntTSL 5 BASIC21.19■□□□□ 0.98
Sh3yl1O08641 Gm4419-202ENSMUST00000226239 1431 ntBASIC21.19■□□□□ 0.98
Sh3yl1O08641 2810002D19Rik-201ENSMUST00000152313 2040 ntTSL 1 (best) BASIC21.19■□□□□ 0.98
Sh3yl1O08641 Ube2e3-201ENSMUST00000028398 2249 ntAPPRIS P1 TSL 1 (best) BASIC21.19■□□□□ 0.98
Sh3yl1O08641 Ing1-201ENSMUST00000054399 2814 ntAPPRIS P1 TSL 1 (best) BASIC21.18■□□□□ 0.98
Sh3yl1O08641 Barhl1-202ENSMUST00000113847 2160 ntAPPRIS P1 TSL 1 (best) BASIC21.18■□□□□ 0.98
Sh3yl1O08641 Znrf2-201ENSMUST00000079869 5886 ntAPPRIS P1 TSL 1 (best) BASIC21.18■□□□□ 0.98
Sh3yl1O08641 Arhgap9-203ENSMUST00000219026 1946 ntAPPRIS P2 TSL 1 (best) BASIC21.17■□□□□ 0.98
Sh3yl1O08641 Usp21-203ENSMUST00000111306 2185 ntAPPRIS ALT1 TSL 1 (best) BASIC21.17■□□□□ 0.98
Sh3yl1O08641 Zswim5-201ENSMUST00000044823 5582 ntAPPRIS P1 TSL 1 (best) BASIC21.17■□□□□ 0.98
Sh3yl1O08641 Eva1b-202ENSMUST00000106150 1144 ntAPPRIS P1 TSL 1 (best) BASIC21.17■□□□□ 0.98
Sh3yl1O08641 Gm9910-201ENSMUST00000195385 1550 ntBASIC21.17■□□□□ 0.98
Sh3yl1O08641 Prrx2-201ENSMUST00000041659 1441 ntAPPRIS P2 TSL 1 (best) BASIC21.16■□□□□ 0.98
Sh3yl1O08641 Lrp2-202ENSMUST00000092551 2228 ntTSL 1 (best) BASIC21.16■□□□□ 0.98
Sh3yl1O08641 Vmac-201ENSMUST00000067931 2174 ntAPPRIS P3 TSL 1 (best) BASIC21.16■□□□□ 0.98
Sh3yl1O08641 D030046N08Rik-201ENSMUST00000162318 1570 ntTSL 1 (best) BASIC21.15■□□□□ 0.98
Sh3yl1O08641 A530095I07Rik-201ENSMUST00000070942 847 ntTSL 1 (best) BASIC21.15■□□□□ 0.98
Sh3yl1O08641 Gng12-204ENSMUST00000114225 1876 ntAPPRIS P1 TSL 1 (best) BASIC21.15■□□□□ 0.98
Sh3yl1O08641 Agps-202ENSMUST00000111952 2589 ntTSL 2 BASIC21.15■□□□□ 0.98
Sh3yl1O08641 Smurf1-201ENSMUST00000085684 5343 ntAPPRIS P4 TSL 1 (best) BASIC21.15■□□□□ 0.98
Sh3yl1O08641 Usp12-201ENSMUST00000085614 4327 ntAPPRIS P1 TSL 1 (best) BASIC21.15■□□□□ 0.98
Sh3yl1O08641 Kcnk12-201ENSMUST00000055221 1936 ntAPPRIS P1 TSL 1 (best) BASIC21.14■□□□□ 0.98
Sh3yl1O08641 Slc25a33-201ENSMUST00000105686 1887 ntAPPRIS P1 TSL 1 (best) BASIC21.14■□□□□ 0.97
Sh3yl1O08641 Ankrd49-205ENSMUST00000216037 1037 ntAPPRIS P1 TSL 2 BASIC21.14■□□□□ 0.97
Sh3yl1O08641 Phf23-202ENSMUST00000101526 1706 ntAPPRIS ALT2 TSL 1 (best) BASIC21.14■□□□□ 0.97
Sh3yl1O08641 Arglu1-201ENSMUST00000048545 3197 ntAPPRIS P1 TSL 2 BASIC21.14■□□□□ 0.97
Retrieved 100 of 76,532 protein–RNA pairs in 14.7 ms