Protein–RNA interactions for Protein: J3QQ59

Gm3383, Predicted gene 3194, mousemouse

Predictions only

Length 259 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Gm3383J3QQ59 Gm45444-201ENSMUST00000211394 898 ntBASIC24.68■■□□□ 1.54
Gm3383J3QQ59 Cckbr-202ENSMUST00000181339 1326 ntTSL 1 (best) BASIC24.67■■□□□ 1.54
Gm3383J3QQ59 Sarnp-203ENSMUST00000219512 953 ntTSL 3 BASIC24.67■■□□□ 1.54
Gm3383J3QQ59 Ppp1r14c-202ENSMUST00000217573 2013 ntTSL 1 (best) BASIC24.67■■□□□ 1.54
Gm3383J3QQ59 Pdcd4-203ENSMUST00000165617 1806 ntAPPRIS P1 TSL 1 (best) BASIC24.66■■□□□ 1.54
Gm3383J3QQ59 Runx2-211ENSMUST00000162629 1607 ntAPPRIS ALT2 TSL 5 BASIC24.66■■□□□ 1.54
Gm3383J3QQ59 Gm13238-201ENSMUST00000117655 780 ntBASIC24.66■■□□□ 1.54
Gm3383J3QQ59 Mt2-201ENSMUST00000034214 511 ntAPPRIS P1 TSL 1 (best) BASIC24.66■■□□□ 1.54
Gm3383J3QQ59 Hist2h3c1-201ENSMUST00000176059 1820 ntAPPRIS P1 BASIC24.65■■□□□ 1.54
Gm3383J3QQ59 Hist2h3c1-202ENSMUST00000177796 1825 ntBASIC24.65■■□□□ 1.54
Gm3383J3QQ59 Arl2bp-201ENSMUST00000034228 2063 ntAPPRIS P1 TSL 1 (best) BASIC24.65■■□□□ 1.54
Gm3383J3QQ59 Tirap-205ENSMUST00000176685 1783 ntAPPRIS P1 TSL 1 (best) BASIC24.65■■□□□ 1.54
Gm3383J3QQ59 Kcnk2-205ENSMUST00000192723 1642 ntAPPRIS ALT1 TSL 1 (best) BASIC24.64■■□□□ 1.54
Gm3383J3QQ59 Jdp2-201ENSMUST00000050687 1643 ntAPPRIS P1 TSL 1 (best) BASIC24.64■■□□□ 1.54
Gm3383J3QQ59 Ube2k-206ENSMUST00000201984 1449 ntTSL 3 BASIC24.64■■□□□ 1.54
Gm3383J3QQ59 Rin3-207ENSMUST00000150795 937 ntTSL 1 (best) BASIC24.64■■□□□ 1.54
Gm3383J3QQ59 Fam168b-204ENSMUST00000170092 941 ntTSL 5 BASIC24.64■■□□□ 1.54
Gm3383J3QQ59 Tmem11-201ENSMUST00000062677 1457 ntAPPRIS P1 TSL 1 (best) BASIC24.64■■□□□ 1.53
Gm3383J3QQ59 Zfp513-202ENSMUST00000114590 2228 ntAPPRIS P1 TSL 1 (best) BASIC24.63■■□□□ 1.53
Gm3383J3QQ59 Suv39h2-202ENSMUST00000060618 1831 ntTSL 1 (best) BASIC24.63■■□□□ 1.53
Gm3383J3QQ59 Vax1-201ENSMUST00000172821 1044 ntAPPRIS P1 TSL 1 (best) BASIC24.63■■□□□ 1.53
Gm3383J3QQ59 Unc119-201ENSMUST00000002127 1329 ntAPPRIS P1 TSL 1 (best) BASIC24.62■■□□□ 1.53
Gm3383J3QQ59 Gsk3a-202ENSMUST00000108411 2248 ntAPPRIS ALT2 TSL 5 BASIC24.62■■□□□ 1.53
Gm3383J3QQ59 Exosc8-201ENSMUST00000029316 1300 ntAPPRIS P1 TSL 1 (best) BASIC24.61■■□□□ 1.53
Gm3383J3QQ59 Sox17-202ENSMUST00000116652 1512 ntAPPRIS P1 TSL 1 (best) BASIC24.61■■□□□ 1.53
Gm3383J3QQ59 Pdpk1-203ENSMUST00000115407 1730 ntTSL 5 BASIC24.61■■□□□ 1.53
Gm3383J3QQ59 Gsc2-201ENSMUST00000012279 1172 ntAPPRIS P1 TSL 1 (best) BASIC24.61■■□□□ 1.53
Gm3383J3QQ59 AC093043.1-201ENSMUST00000226700 898 ntBASIC24.61■■□□□ 1.53
Gm3383J3QQ59 Syce2-202ENSMUST00000136026 1686 ntAPPRIS P3 TSL 1 (best) BASIC24.61■■□□□ 1.53
Gm3383J3QQ59 Ssx2ip-202ENSMUST00000106149 2416 ntAPPRIS ALT2 TSL 1 (best) BASIC24.6■■□□□ 1.53
Gm3383J3QQ59 H2afj-202ENSMUST00000203982 577 ntAPPRIS ALT1 TSL 3 BASIC24.6■■□□□ 1.53
Gm3383J3QQ59 Ndfip1-201ENSMUST00000025293 930 ntAPPRIS P1 TSL 1 (best) BASIC24.6■■□□□ 1.53
Gm3383J3QQ59 Tmem70-203ENSMUST00000177501 1636 ntAPPRIS P3 TSL 1 (best) BASIC24.6■■□□□ 1.53
Gm3383J3QQ59 Gm960-202ENSMUST00000177696 2262 ntAPPRIS P2 TSL 5 BASIC24.6■■□□□ 1.53
Gm3383J3QQ59 Fgf16-201ENSMUST00000033581 1645 ntAPPRIS P1 TSL 1 (best) BASIC24.6■■□□□ 1.53
Gm3383J3QQ59 Cbln1-201ENSMUST00000034076 2800 ntAPPRIS P1 TSL 1 (best) BASIC24.59■■□□□ 1.53
Gm3383J3QQ59 0610009L18Rik-201ENSMUST00000143813 619 ntTSL 2 BASIC24.58■■□□□ 1.53
Gm3383J3QQ59 Gm15820-201ENSMUST00000201566 728 ntBASIC24.58■■□□□ 1.53
Gm3383J3QQ59 Rps24-207ENSMUST00000224568 714 ntBASIC24.58■■□□□ 1.53
Gm3383J3QQ59 Bri3-201ENSMUST00000056578 955 ntAPPRIS P1 TSL 1 (best) BASIC24.58■■□□□ 1.53
Gm3383J3QQ59 Kdm2a-203ENSMUST00000116571 2413 ntTSL 1 (best) BASIC24.57■■□□□ 1.52
Gm3383J3QQ59 Tmem106c-201ENSMUST00000064200 1635 ntAPPRIS P1 TSL 1 (best) BASIC24.57■■□□□ 1.52
Gm3383J3QQ59 Plekha3-201ENSMUST00000111920 2534 ntAPPRIS P1 TSL 1 (best) BASIC24.57■■□□□ 1.52
Gm3383J3QQ59 Fn1-208ENSMUST00000186940 1350 ntTSL 1 (best) BASIC24.56■■□□□ 1.52
Gm3383J3QQ59 Gm20684-201ENSMUST00000176744 380 ntTSL 3 BASIC24.56■■□□□ 1.52
Gm3383J3QQ59 Vdac1-202ENSMUST00000102758 2022 ntAPPRIS P1 TSL 1 (best) BASIC24.56■■□□□ 1.52
Gm3383J3QQ59 Ccna1-202ENSMUST00000197238 1719 ntAPPRIS P1 TSL 5 BASIC24.55■■□□□ 1.52
Gm3383J3QQ59 Vegfb-201ENSMUST00000025914 1281 ntAPPRIS P3 TSL 1 (best) BASIC24.55■■□□□ 1.52
Gm3383J3QQ59 Srcap-202ENSMUST00000098025 1257 ntTSL 5 BASIC24.55■■□□□ 1.52
Gm3383J3QQ59 Dusp2-201ENSMUST00000028846 1617 ntAPPRIS P1 TSL 1 (best) BASIC24.54■■□□□ 1.52
Gm3383J3QQ59 Arhgap39-204ENSMUST00000176219 542 ntTSL 5 BASIC24.54■■□□□ 1.52
Gm3383J3QQ59 Clpp-201ENSMUST00000002735 1207 ntAPPRIS P1 TSL 1 (best) BASIC24.54■■□□□ 1.52
Gm3383J3QQ59 Kcnj6-201ENSMUST00000095873 1773 ntTSL 1 (best) BASIC24.54■■□□□ 1.52
Gm3383J3QQ59 Susd3-203ENSMUST00000119721 1249 ntAPPRIS ALT2 TSL 1 (best) BASIC24.53■■□□□ 1.52
Gm3383J3QQ59 Rpl34-201ENSMUST00000062601 624 ntAPPRIS P1 TSL 1 (best) BASIC24.53■■□□□ 1.52
Gm3383J3QQ59 Ints11-202ENSMUST00000120794 1884 ntTSL 5 BASIC24.53■■□□□ 1.52
Gm3383J3QQ59 Socs2-202ENSMUST00000119917 948 ntAPPRIS P1 TSL 1 (best) BASIC24.52■■□□□ 1.52
Gm3383J3QQ59 Gm45095-201ENSMUST00000206736 254 ntTSL 5 BASIC24.52■■□□□ 1.52
Gm3383J3QQ59 Pcf11-204ENSMUST00000208058 461 ntTSL 5 BASIC24.52■■□□□ 1.52
Gm3383J3QQ59 March2-203ENSMUST00000172767 1381 ntAPPRIS P1 TSL 1 (best) BASIC24.52■■□□□ 1.52
Gm3383J3QQ59 Hrasls-204ENSMUST00000162747 854 ntAPPRIS P1 TSL 1 (best) BASIC24.51■■□□□ 1.51
Gm3383J3QQ59 Mypop-203ENSMUST00000131087 1951 ntAPPRIS P1 TSL 5 BASIC24.51■■□□□ 1.51
Gm3383J3QQ59 Glrx3-201ENSMUST00000064404 1685 ntAPPRIS P2 TSL 1 (best) BASIC24.5■■□□□ 1.51
Gm3383J3QQ59 Gm28040-202ENSMUST00000184603 890 ntAPPRIS P1 TSL 2 BASIC24.5■■□□□ 1.51
Gm3383J3QQ59 Gm45102-201ENSMUST00000207427 857 ntBASIC24.5■■□□□ 1.51
Gm3383J3QQ59 Hoxd9-201ENSMUST00000059272 2136 ntAPPRIS P1 TSL 1 (best) BASIC24.5■■□□□ 1.51
Gm3383J3QQ59 Btg3-201ENSMUST00000023570 1414 ntAPPRIS P1 TSL 1 (best) BASIC24.5■■□□□ 1.51
Gm3383J3QQ59 Thra-202ENSMUST00000103139 2246 ntAPPRIS P1 TSL 1 (best) BASIC24.5■■□□□ 1.51
Gm3383J3QQ59 Ppia-202ENSMUST00000132846 1170 ntAPPRIS P1 TSL 1 (best) BASIC24.49■■□□□ 1.51
Gm3383J3QQ59 Zfp346-203ENSMUST00000159278 1253 ntAPPRIS ALT2 TSL 5 BASIC24.49■■□□□ 1.51
Gm3383J3QQ59 Usf2-203ENSMUST00000162228 960 ntTSL 5 BASIC24.49■■□□□ 1.51
Gm3383J3QQ59 1700065D16Rik-202ENSMUST00000188975 506 ntTSL 3 BASIC24.49■■□□□ 1.51
Gm3383J3QQ59 Gm42501-201ENSMUST00000200220 1026 ntBASIC24.49■■□□□ 1.51
Gm3383J3QQ59 Tmem235-201ENSMUST00000093905 1820 ntAPPRIS P1 TSL 5 BASIC24.49■■□□□ 1.51
Gm3383J3QQ59 Gm16599-201ENSMUST00000148082 1182 ntTSL 1 (best) BASIC24.48■■□□□ 1.51
Gm3383J3QQ59 Pde8b-204ENSMUST00000159608 2370 ntTSL 5 BASIC24.48■■□□□ 1.51
Gm3383J3QQ59 Tmem55b-209ENSMUST00000162957 1465 ntTSL 1 (best) BASIC24.48■■□□□ 1.51
Gm3383J3QQ59 Fkbp1b-201ENSMUST00000020964 976 ntAPPRIS P1 TSL 1 (best) BASIC24.48■■□□□ 1.51
Gm3383J3QQ59 Gm20208-202ENSMUST00000219905 1528 ntTSL 1 (best) BASIC24.48■■□□□ 1.51
Gm3383J3QQ59 Scn1b-201ENSMUST00000098548 1573 ntAPPRIS P1 TSL 1 (best) BASIC24.48■■□□□ 1.51
Gm3383J3QQ59 A430027H14Rik-201ENSMUST00000191809 1467 ntBASIC24.47■■□□□ 1.51
Gm3383J3QQ59 Slc16a11-207ENSMUST00000136328 1403 ntTSL 5 BASIC24.47■■□□□ 1.51
Gm3383J3QQ59 Metrnl-201ENSMUST00000036742 1401 ntAPPRIS P2 TSL 1 (best) BASIC24.47■■□□□ 1.51
Gm3383J3QQ59 Tmem238-201ENSMUST00000168578 1375 ntAPPRIS P1 TSL 1 (best) BASIC24.47■■□□□ 1.51
Gm3383J3QQ59 Eif5a-213ENSMUST00000164359 1281 ntAPPRIS P1 TSL 5 BASIC24.47■■□□□ 1.51
Gm3383J3QQ59 Tmpo-203ENSMUST00000092219 1854 ntTSL 1 (best) BASIC24.47■■□□□ 1.51
Gm3383J3QQ59 Hrh3-205ENSMUST00000165762 1368 ntAPPRIS ALT2 TSL 5 BASIC24.46■■□□□ 1.51
Gm3383J3QQ59 Rps19-202ENSMUST00000108429 633 ntAPPRIS P1 TSL 2 BASIC24.46■■□□□ 1.51
Gm3383J3QQ59 Mpnd-209ENSMUST00000162883 1400 ntTSL 5 BASIC24.45■■□□□ 1.51
Gm3383J3QQ59 Ffar4-201ENSMUST00000067098 1393 ntAPPRIS P1 TSL 1 (best) BASIC24.45■■□□□ 1.5
Gm3383J3QQ59 Gt(ROSA)26Sor-201ENSMUST00000124246 1181 ntTSL 1 (best) BASIC24.45■■□□□ 1.5
Gm3383J3QQ59 Vcpkmt-201ENSMUST00000058639 1027 ntAPPRIS P1 TSL 1 (best) BASIC24.45■■□□□ 1.5
Gm3383J3QQ59 Gm10645-201ENSMUST00000098605 1090 ntAPPRIS P1 BASIC24.45■■□□□ 1.5
Gm3383J3QQ59 Amer2-203ENSMUST00000225247 2662 ntBASIC24.45■■□□□ 1.5
Gm3383J3QQ59 Gm18755-201ENSMUST00000218030 1099 ntBASIC24.44■■□□□ 1.5
Gm3383J3QQ59 Rbm45-201ENSMUST00000046389 1898 ntAPPRIS P1 TSL 1 (best) BASIC24.44■■□□□ 1.5
Gm3383J3QQ59 Ier5l-201ENSMUST00000065134 2683 ntAPPRIS P1 BASIC24.43■■□□□ 1.5
Gm3383J3QQ59 1700097N02Rik-201ENSMUST00000188852 845 ntTSL 3 BASIC24.42■■□□□ 1.5
Gm3383J3QQ59 Acad9-205ENSMUST00000196648 552 ntTSL 3 BASIC24.42■■□□□ 1.5
Gm3383J3QQ59 Gm9767-201ENSMUST00000041011 1193 ntAPPRIS P1 BASIC24.42■■□□□ 1.5
Retrieved 100 of 76,532 protein–RNA pairs in 12.5 ms