Protein–RNA interactions for Protein: H3BJZ2

Cdhr4, Cadherin-related family member 4, mousemouse

Predictions only

Length 783 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cdhr4H3BJZ2 Gipc1-201ENSMUST00000019577 1522 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
Cdhr4H3BJZ2 Gal3st1-202ENSMUST00000078757 1749 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
Cdhr4H3BJZ2 Inafm1-201ENSMUST00000169612 1605 ntAPPRIS P1 BASIC19.89■□□□□ 0.77
Cdhr4H3BJZ2 Gdf7-202ENSMUST00000220073 1399 ntAPPRIS ALT2 TSL 1 (best) BASIC19.89■□□□□ 0.77
Cdhr4H3BJZ2 Kctd6-201ENSMUST00000022272 1650 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.77
Cdhr4H3BJZ2 Fzd9-201ENSMUST00000062572 2293 ntAPPRIS P1 BASIC19.89■□□□□ 0.77
Cdhr4H3BJZ2 Pom121-201ENSMUST00000111171 5580 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.77
Cdhr4H3BJZ2 Six3-201ENSMUST00000162695 2838 ntAPPRIS ALT2 TSL 5 BASIC19.89■□□□□ 0.77
Cdhr4H3BJZ2 Etfa-201ENSMUST00000034866 1392 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
Cdhr4H3BJZ2 Pon2-201ENSMUST00000057792 2409 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
Cdhr4H3BJZ2 Ski-201ENSMUST00000030917 5522 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
Cdhr4H3BJZ2 Usp12-201ENSMUST00000085614 4327 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
Cdhr4H3BJZ2 Hnrnpl-201ENSMUST00000038572 2142 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
Cdhr4H3BJZ2 Gm26711-201ENSMUST00000180866 1833 ntTSL 1 (best) BASIC19.87■□□□□ 0.77
Cdhr4H3BJZ2 Kras-201ENSMUST00000032399 4678 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
Cdhr4H3BJZ2 Pan3-201ENSMUST00000031651 5048 ntAPPRIS P2 TSL 5 BASIC19.86■□□□□ 0.77
Cdhr4H3BJZ2 Cited2-201ENSMUST00000038107 1979 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
Cdhr4H3BJZ2 Vegfa-211ENSMUST00000167860 975 ntTSL 1 (best) BASIC19.86■□□□□ 0.77
Cdhr4H3BJZ2 Vegfa-212ENSMUST00000214739 1107 ntAPPRIS ALT2 TSL 1 (best) BASIC19.86■□□□□ 0.77
Cdhr4H3BJZ2 Vegfa-213ENSMUST00000217017 1179 ntAPPRIS P4 TSL 1 (best) BASIC19.86■□□□□ 0.77
Cdhr4H3BJZ2 Tmem170b-202ENSMUST00000221694 602 ntTSL 3 BASIC19.86■□□□□ 0.77
Cdhr4H3BJZ2 Hecw2-202ENSMUST00000097741 1132 ntTSL 1 (best) BASIC19.86■□□□□ 0.77
Cdhr4H3BJZ2 Nudc-201ENSMUST00000030665 1316 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
Cdhr4H3BJZ2 Wbp1-208ENSMUST00000151393 837 ntTSL 3 BASIC19.85■□□□□ 0.77
Cdhr4H3BJZ2 Ppp2r3d-202ENSMUST00000180270 450 ntTSL 1 (best) BASIC19.85■□□□□ 0.77
Cdhr4H3BJZ2 Bloc1s2-201ENSMUST00000079033 878 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
Cdhr4H3BJZ2 Hook1-201ENSMUST00000030306 5517 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
Cdhr4H3BJZ2 Fam149b-203ENSMUST00000090499 2370 ntAPPRIS P4 TSL 1 (best) BASIC19.85■□□□□ 0.77
Cdhr4H3BJZ2 Hoxc13-201ENSMUST00000001700 2461 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
Cdhr4H3BJZ2 Snta1-202ENSMUST00000109728 2131 ntAPPRIS P2 TSL 1 (best) BASIC19.84■□□□□ 0.77
Cdhr4H3BJZ2 Snta1-201ENSMUST00000028991 2125 ntAPPRIS ALT2 TSL 1 (best) BASIC19.84■□□□□ 0.77
Cdhr4H3BJZ2 Trnau1ap-203ENSMUST00000105962 961 ntTSL 5 BASIC19.84■□□□□ 0.77
Cdhr4H3BJZ2 Fads2-201ENSMUST00000025567 1508 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
Cdhr4H3BJZ2 AC122428.3-201ENSMUST00000215551 2290 ntBASIC19.84■□□□□ 0.77
Cdhr4H3BJZ2 Rnf149-201ENSMUST00000062525 2492 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
Cdhr4H3BJZ2 Ethe1-201ENSMUST00000077191 1484 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
Cdhr4H3BJZ2 Qdpr-201ENSMUST00000015950 1380 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.77
Cdhr4H3BJZ2 Ube2j2-202ENSMUST00000103175 1309 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.77
Cdhr4H3BJZ2 Gm13594-201ENSMUST00000137582 476 ntTSL 1 (best) BASIC19.83■□□□□ 0.77
Cdhr4H3BJZ2 Ddrgk1-201ENSMUST00000089559 1238 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.77
Cdhr4H3BJZ2 Efcc1-202ENSMUST00000159570 2293 ntAPPRIS P2 TSL 5 BASIC19.82■□□□□ 0.76
Cdhr4H3BJZ2 Cbr3-201ENSMUST00000039620 1170 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
Cdhr4H3BJZ2 Ube2k-203ENSMUST00000201266 1449 ntTSL 5 BASIC19.82■□□□□ 0.76
Cdhr4H3BJZ2 Acvr2b-201ENSMUST00000035093 1729 ntTSL 5 BASIC19.82■□□□□ 0.76
Cdhr4H3BJZ2 Maf-202ENSMUST00000109104 6360 ntAPPRIS P2 BASIC19.81■□□□□ 0.76
Cdhr4H3BJZ2 Emc8-208ENSMUST00000181950 747 ntTSL 2 BASIC19.81■□□□□ 0.76
Cdhr4H3BJZ2 Efna3-201ENSMUST00000029673 2363 ntAPPRIS P2 TSL 1 (best) BASIC19.8■□□□□ 0.76
Cdhr4H3BJZ2 Kctd2-201ENSMUST00000103035 1764 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
Cdhr4H3BJZ2 Gm21989-201ENSMUST00000174530 1609 ntTSL 1 (best) BASIC19.8■□□□□ 0.76
Cdhr4H3BJZ2 Gm5067-201ENSMUST00000170449 1009 ntBASIC19.8■□□□□ 0.76
Cdhr4H3BJZ2 Krtap28-10-201ENSMUST00000188323 957 ntAPPRIS P1 BASIC19.8■□□□□ 0.76
Cdhr4H3BJZ2 Ppp1ca-201ENSMUST00000046094 1379 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
Cdhr4H3BJZ2 Hnrnpk-210ENSMUST00000176558 1053 ntTSL 2 BASIC19.79■□□□□ 0.76
Cdhr4H3BJZ2 A030014E15Rik-201ENSMUST00000223400 796 ntAPPRIS P1 BASIC19.79■□□□□ 0.76
Cdhr4H3BJZ2 4930597O21Rik-201ENSMUST00000065878 984 ntTSL 1 (best) BASIC19.79■□□□□ 0.76
Cdhr4H3BJZ2 A830092H15Rik-201ENSMUST00000099182 1229 ntBASIC19.79■□□□□ 0.76
Cdhr4H3BJZ2 Kcnq5-201ENSMUST00000029667 6562 ntAPPRIS P3 TSL 1 (best) BASIC19.79■□□□□ 0.76
Cdhr4H3BJZ2 H2afy-202ENSMUST00000045788 1933 ntTSL 1 (best) BASIC19.78■□□□□ 0.76
Cdhr4H3BJZ2 Rab4a-202ENSMUST00000118535 1419 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
Cdhr4H3BJZ2 Btf3l4-203ENSMUST00000102741 1033 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
Cdhr4H3BJZ2 Slc39a13-203ENSMUST00000111436 1291 ntTSL 1 (best) BASIC19.78■□□□□ 0.76
Cdhr4H3BJZ2 Ildr2-202ENSMUST00000192426 1238 ntTSL 1 (best) BASIC19.78■□□□□ 0.76
Cdhr4H3BJZ2 Ccna1-202ENSMUST00000197238 1719 ntAPPRIS P1 TSL 5 BASIC19.78■□□□□ 0.76
Cdhr4H3BJZ2 Ipmk-202ENSMUST00000118381 1323 ntTSL 1 (best) BASIC19.77■□□□□ 0.76
Cdhr4H3BJZ2 Adra1d-201ENSMUST00000103184 1899 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.76
Cdhr4H3BJZ2 Rbm45-201ENSMUST00000046389 1898 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.76
Cdhr4H3BJZ2 Gm4419-202ENSMUST00000226239 1431 ntBASIC19.76■□□□□ 0.75
Cdhr4H3BJZ2 Efna2-201ENSMUST00000003154 2131 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
Cdhr4H3BJZ2 Gm20109-201ENSMUST00000180802 671 ntTSL 1 (best) BASIC19.76■□□□□ 0.75
Cdhr4H3BJZ2 Rpl35-201ENSMUST00000080861 946 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
Cdhr4H3BJZ2 Oaz2-206ENSMUST00000153700 1843 ntAPPRIS P2 TSL 5 BASIC19.76■□□□□ 0.75
Cdhr4H3BJZ2 Gas2l1-201ENSMUST00000037146 2686 ntAPPRIS ALT2 TSL 1 (best) BASIC19.76■□□□□ 0.75
Cdhr4H3BJZ2 Srsf2-206ENSMUST00000190993 1326 ntAPPRIS P1 TSL 2 BASIC19.76■□□□□ 0.75
Cdhr4H3BJZ2 Upf3a-201ENSMUST00000043767 2057 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
Cdhr4H3BJZ2 Frmd4a-201ENSMUST00000075767 6761 ntAPPRIS ALT2 TSL 1 (best) BASIC19.75■□□□□ 0.75
Cdhr4H3BJZ2 Tmpo-203ENSMUST00000092219 1854 ntTSL 1 (best) BASIC19.75■□□□□ 0.75
Cdhr4H3BJZ2 Actr3b-202ENSMUST00000128727 2031 ntTSL 1 (best) BASIC19.75■□□□□ 0.75
Cdhr4H3BJZ2 Gm20458-201ENSMUST00000164863 1369 ntAPPRIS P1 TSL 5 BASIC19.75■□□□□ 0.75
Cdhr4H3BJZ2 Sike1-202ENSMUST00000119450 774 ntTSL 3 BASIC19.75■□□□□ 0.75
Cdhr4H3BJZ2 Eml4-202ENSMUST00000096766 5445 ntAPPRIS ALT2 TSL 1 (best) BASIC19.75■□□□□ 0.75
Cdhr4H3BJZ2 Cadm1-209ENSMUST00000152459 1784 ntTSL 1 (best) BASIC19.75■□□□□ 0.75
Cdhr4H3BJZ2 Dcbld2-201ENSMUST00000046663 6561 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
Cdhr4H3BJZ2 Gm10420-201ENSMUST00000121713 882 ntBASIC19.74■□□□□ 0.75
Cdhr4H3BJZ2 Cadm1-206ENSMUST00000143026 1643 ntTSL 5 BASIC19.73■□□□□ 0.75
Cdhr4H3BJZ2 Vmac-201ENSMUST00000067931 2174 ntAPPRIS P3 TSL 1 (best) BASIC19.73■□□□□ 0.75
Cdhr4H3BJZ2 Hpf1-204ENSMUST00000146863 531 ntTSL 2 BASIC19.73■□□□□ 0.75
Cdhr4H3BJZ2 Atp5a1-202ENSMUST00000114748 2674 ntTSL 1 (best) BASIC19.72■□□□□ 0.75
Cdhr4H3BJZ2 Arx-202ENSMUST00000113947 2454 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
Cdhr4H3BJZ2 Sft2d1-210ENSMUST00000154553 1049 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
Cdhr4H3BJZ2 Hoxd9-201ENSMUST00000059272 2136 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
Cdhr4H3BJZ2 Ildr2-206ENSMUST00000194964 2467 ntAPPRIS ALT2 TSL 1 (best) BASIC19.71■□□□□ 0.75
Cdhr4H3BJZ2 Ppp4r2-201ENSMUST00000063854 4874 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
Cdhr4H3BJZ2 Grin2d-201ENSMUST00000002848 5431 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
Cdhr4H3BJZ2 Glrx3-201ENSMUST00000064404 1685 ntAPPRIS P2 TSL 1 (best) BASIC19.71■□□□□ 0.75
Cdhr4H3BJZ2 Gng12-204ENSMUST00000114225 1876 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
Cdhr4H3BJZ2 Cadps-203ENSMUST00000112658 5458 ntAPPRIS ALT2 TSL 1 (best) BASIC19.71■□□□□ 0.75
Cdhr4H3BJZ2 Pdpk1-203ENSMUST00000115407 1730 ntTSL 5 BASIC19.71■□□□□ 0.75
Cdhr4H3BJZ2 Pan3-209ENSMUST00000176600 5541 ntAPPRIS ALT2 TSL 5 BASIC19.7■□□□□ 0.74
Cdhr4H3BJZ2 Gm44428-201ENSMUST00000204474 874 ntBASIC19.7■□□□□ 0.74
Cdhr4H3BJZ2 Ppp1r35-201ENSMUST00000031739 956 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
Retrieved 100 of 76,532 protein–RNA pairs in 24.4 ms