Protein–RNA interactions for Protein: E9PXF0

Pcdh17, Protocadherin 17, mousemouse

Predictions only

Length 1,157 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdh17E9PXF0 Kcnq5-206ENSMUST00000173404 2775 ntAPPRIS ALT2 TSL 5 BASIC20.91■□□□□ 0.94
Pcdh17E9PXF0 Aldoa-214ENSMUST00000207534 741 ntAPPRIS P1 TSL 5 BASIC20.91■□□□□ 0.94
Pcdh17E9PXF0 Nans-201ENSMUST00000030018 2179 ntAPPRIS P1 TSL 1 (best) BASIC20.91■□□□□ 0.94
Pcdh17E9PXF0 Ppp1ca-201ENSMUST00000046094 1379 ntAPPRIS P1 TSL 1 (best) BASIC20.91■□□□□ 0.94
Pcdh17E9PXF0 Nisch-222ENSMUST00000172142 2780 ntAPPRIS ALT2 TSL 1 (best) BASIC20.9■□□□□ 0.94
Pcdh17E9PXF0 St7-208ENSMUST00000115419 2194 ntTSL 1 (best) BASIC20.9■□□□□ 0.94
Pcdh17E9PXF0 Gm20458-201ENSMUST00000164863 1369 ntAPPRIS P1 TSL 5 BASIC20.89■□□□□ 0.93
Pcdh17E9PXF0 Hecw2-202ENSMUST00000097741 1132 ntTSL 1 (best) BASIC20.89■□□□□ 0.93
Pcdh17E9PXF0 Tm6sf1-201ENSMUST00000041890 2226 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.93
Pcdh17E9PXF0 Cadm1-206ENSMUST00000143026 1643 ntTSL 5 BASIC20.89■□□□□ 0.93
Pcdh17E9PXF0 Tsc22d1-204ENSMUST00000110888 4999 ntTSL 1 (best) BASIC20.88■□□□□ 0.93
Pcdh17E9PXF0 Gxylt1-202ENSMUST00000057896 1891 ntAPPRIS ALT2 TSL 5 BASIC20.88■□□□□ 0.93
Pcdh17E9PXF0 Gm44428-201ENSMUST00000204474 874 ntBASIC20.88■□□□□ 0.93
Pcdh17E9PXF0 Pgls-201ENSMUST00000034264 893 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
Pcdh17E9PXF0 Mnx1-201ENSMUST00000001608 2018 ntAPPRIS ALT2 TSL 5 BASIC20.88■□□□□ 0.93
Pcdh17E9PXF0 Zswim5-201ENSMUST00000044823 5582 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
Pcdh17E9PXF0 Pde8b-204ENSMUST00000159608 2370 ntTSL 5 BASIC20.88■□□□□ 0.93
Pcdh17E9PXF0 Mpp6-209ENSMUST00000204545 2418 ntAPPRIS P1 TSL 5 BASIC20.87■□□□□ 0.93
Pcdh17E9PXF0 Tmem260-208ENSMUST00000226400 2281 ntAPPRIS ALT2 BASIC20.87■□□□□ 0.93
Pcdh17E9PXF0 Btf3l4-203ENSMUST00000102741 1033 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
Pcdh17E9PXF0 Hpf1-204ENSMUST00000146863 531 ntTSL 2 BASIC20.87■□□□□ 0.93
Pcdh17E9PXF0 Fam220a-204ENSMUST00000119488 2202 ntTSL 1 (best) BASIC20.87■□□□□ 0.93
Pcdh17E9PXF0 Fam220a-209ENSMUST00000200267 2202 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
Pcdh17E9PXF0 Kctd2-201ENSMUST00000103035 1764 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
Pcdh17E9PXF0 H2afy-202ENSMUST00000045788 1933 ntTSL 1 (best) BASIC20.86■□□□□ 0.93
Pcdh17E9PXF0 Shox2-204ENSMUST00000162439 1081 ntTSL 1 (best) BASIC20.86■□□□□ 0.93
Pcdh17E9PXF0 Mast2-203ENSMUST00000106485 5705 ntAPPRIS ALT2 TSL 1 (best) BASIC20.86■□□□□ 0.93
Pcdh17E9PXF0 Mast2-204ENSMUST00000106486 5723 ntAPPRIS P4 TSL 1 (best) BASIC20.86■□□□□ 0.93
Pcdh17E9PXF0 Gm21989-201ENSMUST00000174530 1609 ntTSL 1 (best) BASIC20.86■□□□□ 0.93
Pcdh17E9PXF0 Galr3-201ENSMUST00000058004 1245 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
Pcdh17E9PXF0 Gm7276-201ENSMUST00000097520 1252 ntAPPRIS P1 BASIC20.85■□□□□ 0.93
Pcdh17E9PXF0 Ei24-202ENSMUST00000163192 2309 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
Pcdh17E9PXF0 Lrrc4b-201ENSMUST00000058667 2728 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
Pcdh17E9PXF0 Emid1-201ENSMUST00000062821 1947 ntAPPRIS P2 TSL 1 (best) BASIC20.84■□□□□ 0.93
Pcdh17E9PXF0 Slc22a17-201ENSMUST00000050772 2290 ntTSL 1 (best) BASIC20.83■□□□□ 0.93
Pcdh17E9PXF0 Amigo1-201ENSMUST00000050909 5030 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.93
Pcdh17E9PXF0 Nudt3-203ENSMUST00000114886 996 ntTSL 2 BASIC20.83■□□□□ 0.93
Pcdh17E9PXF0 Lsm4-205ENSMUST00000210987 636 ntTSL 5 BASIC20.83■□□□□ 0.93
Pcdh17E9PXF0 Cited1-202ENSMUST00000101336 1090 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
Pcdh17E9PXF0 Oaz2-206ENSMUST00000153700 1843 ntAPPRIS P2 TSL 5 BASIC20.82■□□□□ 0.92
Pcdh17E9PXF0 Fus-201ENSMUST00000077609 1831 ntAPPRIS ALT2 TSL 1 (best) BASIC20.82■□□□□ 0.92
Pcdh17E9PXF0 Preb-209ENSMUST00000202567 1869 ntTSL 1 (best) BASIC20.81■□□□□ 0.92
Pcdh17E9PXF0 Znrf2-201ENSMUST00000079869 5886 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
Pcdh17E9PXF0 Nudt6-204ENSMUST00000108118 935 ntTSL 5 BASIC20.81■□□□□ 0.92
Pcdh17E9PXF0 Nudt6-201ENSMUST00000052645 1155 ntAPPRIS ALT2 TSL 1 (best) BASIC20.81■□□□□ 0.92
Pcdh17E9PXF0 Nudt6-202ENSMUST00000099130 1070 ntAPPRIS P3 TSL 1 (best) BASIC20.81■□□□□ 0.92
Pcdh17E9PXF0 Msto1-202ENSMUST00000126245 1875 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
Pcdh17E9PXF0 Htatsf1-202ENSMUST00000114751 1128 ntTSL 1 (best) BASIC20.8■□□□□ 0.92
Pcdh17E9PXF0 Lin7b-201ENSMUST00000003971 735 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
Pcdh17E9PXF0 Cd320-201ENSMUST00000002379 2209 ntAPPRIS P3 TSL 1 (best) BASIC20.8■□□□□ 0.92
Pcdh17E9PXF0 Kcnmb4os2-203ENSMUST00000127070 1048 ntTSL 2 BASIC20.79■□□□□ 0.92
Pcdh17E9PXF0 H1fx-201ENSMUST00000056403 1217 ntAPPRIS P1 BASIC20.79■□□□□ 0.92
Pcdh17E9PXF0 Srcap-211ENSMUST00000189136 1960 ntTSL 1 (best) BASIC20.79■□□□□ 0.92
Pcdh17E9PXF0 Fam92a-208ENSMUST00000177837 1325 ntAPPRIS ALT2 TSL 5 BASIC20.78■□□□□ 0.92
Pcdh17E9PXF0 Tnfsfm13-203ENSMUST00000180587 2235 ntAPPRIS P3 TSL 2 BASIC20.78■□□□□ 0.92
Pcdh17E9PXF0 Cdkn2c-202ENSMUST00000097921 2471 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
Pcdh17E9PXF0 Pcsk1n-201ENSMUST00000041096 2193 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
Pcdh17E9PXF0 Usf1-210ENSMUST00000167546 1822 ntAPPRIS P1 TSL 5 BASIC20.78■□□□□ 0.92
Pcdh17E9PXF0 Smurf1-201ENSMUST00000085684 5343 ntAPPRIS P4 TSL 1 (best) BASIC20.78■□□□□ 0.92
Pcdh17E9PXF0 Ppcs-201ENSMUST00000030385 1443 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
Pcdh17E9PXF0 Mypop-201ENSMUST00000059331 2173 ntAPPRIS P1 TSL 5 BASIC20.78■□□□□ 0.92
Pcdh17E9PXF0 D17Wsu92e-201ENSMUST00000075076 1470 ntTSL 1 (best) BASIC20.77■□□□□ 0.92
Pcdh17E9PXF0 Fzd9-201ENSMUST00000062572 2293 ntAPPRIS P1 BASIC20.77■□□□□ 0.92
Pcdh17E9PXF0 Kcnk2-205ENSMUST00000192723 1642 ntAPPRIS ALT1 TSL 1 (best) BASIC20.77■□□□□ 0.92
Pcdh17E9PXF0 Pom121-201ENSMUST00000111171 5580 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.92
Pcdh17E9PXF0 Tmem70-203ENSMUST00000177501 1636 ntAPPRIS P3 TSL 1 (best) BASIC20.76■□□□□ 0.91
Pcdh17E9PXF0 Tmpo-203ENSMUST00000092219 1854 ntTSL 1 (best) BASIC20.76■□□□□ 0.91
Pcdh17E9PXF0 Hnrnpul1-202ENSMUST00000108401 1240 ntTSL 1 (best) BASIC20.76■□□□□ 0.91
Pcdh17E9PXF0 Cyp2r1-202ENSMUST00000119712 917 ntTSL 5 BASIC20.76■□□□□ 0.91
Pcdh17E9PXF0 Gm5921-201ENSMUST00000075898 882 ntBASIC20.76■□□□□ 0.91
Pcdh17E9PXF0 Glrx3-201ENSMUST00000064404 1685 ntAPPRIS P2 TSL 1 (best) BASIC20.76■□□□□ 0.91
Pcdh17E9PXF0 Mapkap1-202ENSMUST00000113124 1758 ntAPPRIS ALT1 TSL 5 BASIC20.75■□□□□ 0.91
Pcdh17E9PXF0 Dleu7-201ENSMUST00000063169 1314 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
Pcdh17E9PXF0 Rnf115-201ENSMUST00000029740 2209 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
Pcdh17E9PXF0 Hist2h3c1-201ENSMUST00000176059 1820 ntAPPRIS P1 BASIC20.74■□□□□ 0.91
Pcdh17E9PXF0 Hist2h3c1-202ENSMUST00000177796 1825 ntBASIC20.74■□□□□ 0.91
Pcdh17E9PXF0 Hoxd9-201ENSMUST00000059272 2136 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
Pcdh17E9PXF0 Pdpk1-203ENSMUST00000115407 1730 ntTSL 5 BASIC20.74■□□□□ 0.91
Pcdh17E9PXF0 Pmvk-201ENSMUST00000029564 1194 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
Pcdh17E9PXF0 Ctnnd2-201ENSMUST00000081728 5944 ntAPPRIS P2 TSL 1 (best) BASIC20.74■□□□□ 0.91
Pcdh17E9PXF0 Cpe-201ENSMUST00000048967 2117 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
Pcdh17E9PXF0 Frat2-201ENSMUST00000059231 2161 ntAPPRIS P1 BASIC20.73■□□□□ 0.91
Pcdh17E9PXF0 Neurl1b-202ENSMUST00000182897 1231 ntTSL 5 BASIC20.73■□□□□ 0.91
Pcdh17E9PXF0 Tm2d2-201ENSMUST00000033961 1281 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
Pcdh17E9PXF0 Csnk1g2-201ENSMUST00000079773 2348 ntTSL 1 (best) BASIC20.73■□□□□ 0.91
Pcdh17E9PXF0 Ipmk-203ENSMUST00000121446 1492 ntAPPRIS ALT2 TSL 5 BASIC20.73■□□□□ 0.91
Pcdh17E9PXF0 Cadm1-209ENSMUST00000152459 1784 ntTSL 1 (best) BASIC20.71■□□□□ 0.91
Pcdh17E9PXF0 Rbm45-201ENSMUST00000046389 1898 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
Pcdh17E9PXF0 Cdr2-201ENSMUST00000033169 2525 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
Pcdh17E9PXF0 Usp2-206ENSMUST00000176416 1486 ntAPPRIS ALT2 TSL 1 (best) BASIC20.7■□□□□ 0.9
Pcdh17E9PXF0 Gm20208-202ENSMUST00000219905 1528 ntTSL 1 (best) BASIC20.7■□□□□ 0.9
Pcdh17E9PXF0 Cited4-201ENSMUST00000094814 1249 ntAPPRIS P1 BASIC20.7■□□□□ 0.9
Pcdh17E9PXF0 Ccna1-202ENSMUST00000197238 1719 ntAPPRIS P1 TSL 5 BASIC20.7■□□□□ 0.9
Pcdh17E9PXF0 Sox3-201ENSMUST00000135107 2065 ntAPPRIS P1 BASIC20.69■□□□□ 0.9
Pcdh17E9PXF0 5031425E22Rik-201ENSMUST00000101522 2110 ntBASIC20.69■□□□□ 0.9
Pcdh17E9PXF0 Syndig1l-201ENSMUST00000095550 2524 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
Pcdh17E9PXF0 Gfra4-206ENSMUST00000110240 1426 ntAPPRIS ALT2 TSL 1 (best) BASIC20.69■□□□□ 0.9
Pcdh17E9PXF0 Gng12-204ENSMUST00000114225 1876 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
Pcdh17E9PXF0 Tmem11-201ENSMUST00000062677 1457 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
Pcdh17E9PXF0 Pura-201ENSMUST00000051301 3145 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
Retrieved 100 of 76,532 protein–RNA pairs in 60.3 ms