Protein–RNA interactions for Protein: E0CZH3

Foxi3, Forkhead box I3, mousemouse

Predictions only

Length 425 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Foxi3E0CZH3 Cnnm4-201ENSMUST00000153128 4547 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
Foxi3E0CZH3 Fam60a-203ENSMUST00000111562 906 ntAPPRIS P1 TSL 3 BASIC17.22■□□□□ 0.35
Foxi3E0CZH3 Trim33-201ENSMUST00000029444 8875 ntAPPRIS P4 TSL 1 (best) BASIC17.22■□□□□ 0.35
Foxi3E0CZH3 Ybx3-201ENSMUST00000032309 1853 ntAPPRIS P4 TSL 1 (best) BASIC17.21■□□□□ 0.35
Foxi3E0CZH3 4931440P22Rik-201ENSMUST00000099076 1786 ntTSL 1 (best) BASIC17.21■□□□□ 0.35
Foxi3E0CZH3 A330041J22Rik-201ENSMUST00000150367 1825 ntTSL 1 (best) BASIC17.21■□□□□ 0.35
Foxi3E0CZH3 Cnot6-203ENSMUST00000145353 5736 ntAPPRIS P1 TSL 5 BASIC17.21■□□□□ 0.35
Foxi3E0CZH3 Ubtf-213ENSMUST00000178839 4580 ntAPPRIS ALT2 TSL 1 (best) BASIC17.21■□□□□ 0.34
Foxi3E0CZH3 Tirap-207ENSMUST00000177129 2366 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.34
Foxi3E0CZH3 E2f5-202ENSMUST00000165922 1751 ntAPPRIS ALT2 TSL 5 BASIC17.2■□□□□ 0.34
Foxi3E0CZH3 1700028N14Rik-201ENSMUST00000139621 747 ntTSL 1 (best) BASIC17.2■□□□□ 0.34
Foxi3E0CZH3 AI837181-202ENSMUST00000159759 1515 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
Foxi3E0CZH3 Maz-203ENSMUST00000205568 2650 ntAPPRIS P1 TSL 5 BASIC17.2■□□□□ 0.34
Foxi3E0CZH3 Gm42699-201ENSMUST00000198104 1657 ntBASIC17.2■□□□□ 0.34
Foxi3E0CZH3 Itpka-201ENSMUST00000028758 1818 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
Foxi3E0CZH3 Srsf12-201ENSMUST00000067864 2939 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
Foxi3E0CZH3 Dpy19l1-206ENSMUST00000170356 4715 ntAPPRIS P1 TSL 5 BASIC17.19■□□□□ 0.34
Foxi3E0CZH3 CT030161.2-201ENSMUST00000218666 735 ntTSL 3 BASIC17.19■□□□□ 0.34
Foxi3E0CZH3 Srsf9-201ENSMUST00000031513 1162 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
Foxi3E0CZH3 Mettl25-201ENSMUST00000046638 2033 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
Foxi3E0CZH3 Tcerg1l-201ENSMUST00000160436 2565 ntAPPRIS P1 TSL 5 BASIC17.19■□□□□ 0.34
Foxi3E0CZH3 Fbxo6-201ENSMUST00000030858 1346 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
Foxi3E0CZH3 Fam3c-201ENSMUST00000081288 1487 ntTSL 1 (best) BASIC17.18■□□□□ 0.34
Foxi3E0CZH3 Pde8b-204ENSMUST00000159608 2370 ntTSL 5 BASIC17.18■□□□□ 0.34
Foxi3E0CZH3 Znhit6-201ENSMUST00000098534 2339 ntAPPRIS P3 TSL 1 (best) BASIC17.18■□□□□ 0.34
Foxi3E0CZH3 Mxra7-201ENSMUST00000021170 2063 ntAPPRIS P3 TSL 1 (best) BASIC17.18■□□□□ 0.34
Foxi3E0CZH3 Tmeff1-202ENSMUST00000123476 1224 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
Foxi3E0CZH3 Babam2-209ENSMUST00000201352 1888 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
Foxi3E0CZH3 Cpsf4-201ENSMUST00000070487 1606 ntTSL 1 (best) BASIC17.18■□□□□ 0.34
Foxi3E0CZH3 Syndig1l-204ENSMUST00000222422 1758 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
Foxi3E0CZH3 St7-209ENSMUST00000115420 2094 ntTSL 5 BASIC17.17■□□□□ 0.34
Foxi3E0CZH3 Brd1-203ENSMUST00000109381 4886 ntTSL 5 BASIC17.17■□□□□ 0.34
Foxi3E0CZH3 Ttc9-201ENSMUST00000036116 2042 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
Foxi3E0CZH3 Bean1-202ENSMUST00000164076 2423 ntAPPRIS ALT2 TSL 1 (best) BASIC17.17■□□□□ 0.34
Foxi3E0CZH3 Morn4-201ENSMUST00000051772 1816 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
Foxi3E0CZH3 P4htm-201ENSMUST00000006853 1841 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
Foxi3E0CZH3 Bola3-207ENSMUST00000136501 2312 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
Foxi3E0CZH3 Psip1-203ENSMUST00000107215 1898 ntTSL 1 (best) BASIC17.16■□□□□ 0.34
Foxi3E0CZH3 Crls1-201ENSMUST00000028835 1924 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
Foxi3E0CZH3 Nelfe-201ENSMUST00000097343 1607 ntAPPRIS P1 TSL 5 BASIC17.16■□□□□ 0.34
Foxi3E0CZH3 Erc1-202ENSMUST00000079582 2304 ntTSL 1 (best) BASIC17.16■□□□□ 0.34
Foxi3E0CZH3 Fgf20-201ENSMUST00000034014 1476 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
Foxi3E0CZH3 Lrrc59-201ENSMUST00000021239 2837 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
Foxi3E0CZH3 Yars2-201ENSMUST00000059955 1574 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
Foxi3E0CZH3 Suds3-201ENSMUST00000086471 2425 ntAPPRIS P3 TSL 1 (best) BASIC17.15■□□□□ 0.34
Foxi3E0CZH3 Tle1-205ENSMUST00000107337 2067 ntTSL 1 (best) BASIC17.15■□□□□ 0.34
Foxi3E0CZH3 Gsr-201ENSMUST00000033992 2673 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
Foxi3E0CZH3 Doc2a-201ENSMUST00000064110 2538 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
Foxi3E0CZH3 Mageb3-201ENSMUST00000104936 2341 ntAPPRIS P1 BASIC17.15■□□□□ 0.34
Foxi3E0CZH3 2410022M11Rik-201ENSMUST00000186474 1911 ntBASIC17.15■□□□□ 0.34
Foxi3E0CZH3 Best2-202ENSMUST00000209322 1944 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
Foxi3E0CZH3 Antxr1-204ENSMUST00000204805 2156 ntAPPRIS ALT2 TSL 5 BASIC17.15■□□□□ 0.34
Foxi3E0CZH3 Chn2-201ENSMUST00000046856 2418 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
Foxi3E0CZH3 Kcnq5-205ENSMUST00000173058 2472 ntTSL 5 BASIC17.14■□□□□ 0.34
Foxi3E0CZH3 Il3ra-201ENSMUST00000090591 1614 ntAPPRIS P2 TSL 1 (best) BASIC17.14■□□□□ 0.33
Foxi3E0CZH3 Pate2-201ENSMUST00000098906 1690 ntAPPRIS ALT2 TSL 2 BASIC17.14■□□□□ 0.33
Foxi3E0CZH3 Dbf4-207ENSMUST00000171808 2402 ntAPPRIS P3 TSL 1 (best) BASIC17.14■□□□□ 0.33
Foxi3E0CZH3 Dazap1-202ENSMUST00000105361 1537 ntAPPRIS ALT1 TSL 1 (best) BASIC17.14■□□□□ 0.33
Foxi3E0CZH3 Serpinh1-202ENSMUST00000169437 2274 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
Foxi3E0CZH3 Gm26796-201ENSMUST00000181092 2276 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
Foxi3E0CZH3 Brsk1-201ENSMUST00000048248 2996 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
Foxi3E0CZH3 Ubl4a-206ENSMUST00000155676 2442 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
Foxi3E0CZH3 Gm26775-201ENSMUST00000180684 2197 ntTSL 5 BASIC17.13■□□□□ 0.33
Foxi3E0CZH3 Tmcc1-202ENSMUST00000088896 5838 ntAPPRIS P2 TSL 1 (best) BASIC17.13■□□□□ 0.33
Foxi3E0CZH3 Lmo2-203ENSMUST00000111143 1654 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
Foxi3E0CZH3 D730045B01Rik-202ENSMUST00000186838 1543 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
Foxi3E0CZH3 Atn1-201ENSMUST00000088357 4433 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
Foxi3E0CZH3 Gm5784-202ENSMUST00000220896 2016 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
Foxi3E0CZH3 Gm10616-201ENSMUST00000205285 2127 ntBASIC17.12■□□□□ 0.33
Foxi3E0CZH3 Eid2-201ENSMUST00000059596 1392 ntAPPRIS P1 BASIC17.12■□□□□ 0.33
Foxi3E0CZH3 Mpzl1-201ENSMUST00000068705 2171 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
Foxi3E0CZH3 Basp1-201ENSMUST00000058845 1855 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
Foxi3E0CZH3 Ube2i-206ENSMUST00000172618 1559 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
Foxi3E0CZH3 Pdss1-201ENSMUST00000053729 1642 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
Foxi3E0CZH3 Sys1-201ENSMUST00000072452 1606 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
Foxi3E0CZH3 Phox2b-201ENSMUST00000012664 3013 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
Foxi3E0CZH3 Peli3-201ENSMUST00000025834 1971 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
Foxi3E0CZH3 AC123857.1-201ENSMUST00000181053 2312 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
Foxi3E0CZH3 Mindy2-202ENSMUST00000213380 2521 ntAPPRIS ALT2 TSL 1 (best) BASIC17.1■□□□□ 0.33
Foxi3E0CZH3 Mfn1-201ENSMUST00000091257 4562 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
Foxi3E0CZH3 Eif2ak3-204ENSMUST00000162950 927 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
Foxi3E0CZH3 Hsf1-207ENSMUST00000228371 2102 ntBASIC17.1■□□□□ 0.33
Foxi3E0CZH3 Slc18a3-201ENSMUST00000191501 2413 ntAPPRIS P1 BASIC17.1■□□□□ 0.33
Foxi3E0CZH3 Eml4-202ENSMUST00000096766 5445 ntAPPRIS ALT2 TSL 1 (best) BASIC17.1■□□□□ 0.33
Foxi3E0CZH3 Stx3-202ENSMUST00000069285 2810 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
Foxi3E0CZH3 Cic-202ENSMUST00000163320 6096 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
Foxi3E0CZH3 Cic-201ENSMUST00000005578 6099 ntTSL 5 BASIC17.09■□□□□ 0.33
Foxi3E0CZH3 Thap4-206ENSMUST00000190116 5558 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
Foxi3E0CZH3 Agap2-201ENSMUST00000039259 5633 ntAPPRIS P2 TSL 1 (best) BASIC17.09■□□□□ 0.33
Foxi3E0CZH3 Ppm1g-205ENSMUST00000202294 1868 ntTSL 5 BASIC17.09■□□□□ 0.33
Foxi3E0CZH3 Hoxb3os-202ENSMUST00000147410 1945 ntTSL 5 BASIC17.09■□□□□ 0.33
Foxi3E0CZH3 Krt10-201ENSMUST00000103131 2094 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
Foxi3E0CZH3 Rfx5-204ENSMUST00000107255 2350 ntAPPRIS P1 TSL 5 BASIC17.08■□□□□ 0.33
Foxi3E0CZH3 Cpeb3-205ENSMUST00000126781 2095 ntTSL 1 (best) BASIC17.08■□□□□ 0.33
Foxi3E0CZH3 Ccnd3-205ENSMUST00000182209 1977 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.33
Foxi3E0CZH3 Syde2-201ENSMUST00000039517 5495 ntAPPRIS P2 TSL 1 (best) BASIC17.08■□□□□ 0.33
Foxi3E0CZH3 Zmynd12-201ENSMUST00000094819 1464 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
Foxi3E0CZH3 2210008F06Rik-201ENSMUST00000180805 1082 ntTSL 1 (best) BASIC17.08■□□□□ 0.32
Foxi3E0CZH3 Gm45580-201ENSMUST00000210430 889 ntTSL 5 BASIC17.08■□□□□ 0.32
Foxi3E0CZH3 Zcchc11-201ENSMUST00000043368 6054 ntAPPRIS P2 TSL 5 BASIC17.08■□□□□ 0.32
Retrieved 100 of 76,532 protein–RNA pairs in 1551.3 ms